Wall clock time and date at job start Sun Mar 7 2021 00:07:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35997 * 117.00067 * 2 1 4 4 C 1.38563 * 120.06316 * 0.22869 * 3 2 1 5 5 C 1.38279 * 120.01325 * 180.27793 * 4 3 2 6 6 C 1.50706 * 119.91731 * 179.72487 * 5 4 3 7 7 O 1.42893 * 109.47128 * 65.02420 * 6 5 4 8 8 Si 1.86300 * 109.46747 * 185.02333 * 6 5 4 9 9 C 1.38203 * 120.15558 * 359.74326 * 5 4 3 10 10 C 1.38377 * 120.13524 * 0.02562 * 9 5 4 11 11 Cl 1.73604 * 120.01159 * 179.97438 * 10 9 5 12 12 C 1.38623 * 119.98048 * 359.97438 * 10 9 5 13 13 O 1.36017 * 120.07901 * 179.97438 * 12 10 9 14 14 C 1.42899 * 116.99610 * 90.00018 * 13 12 10 15 15 C 1.52996 * 109.47208 * 90.00280 * 14 13 12 16 16 C 1.50702 * 109.46876 * 209.99839 * 14 13 12 17 17 O 1.21283 * 120.00262 * 0.02562 * 16 14 13 18 18 N 1.34777 * 119.99928 * 179.72354 * 16 14 13 19 19 C 1.46499 * 120.00199 * 180.27479 * 18 16 14 20 20 H 1.09001 * 112.84905 * 23.81116 * 19 18 16 21 21 C 1.53781 * 113.61433 * 155.00089 * 19 18 16 22 22 C 1.53781 * 87.07867 * 89.12078 * 21 19 18 23 23 H 1.08992 * 113.61266 * 270.79724 * 22 21 19 24 24 C 1.50701 * 113.61551 * 139.98153 * 22 21 19 25 25 C 1.38446 * 119.99237 * 119.71915 * 24 22 21 26 26 F 1.35104 * 120.00726 * 0.02652 * 25 24 22 27 27 C 1.38437 * 119.98116 * 179.76783 * 25 24 22 28 28 C 1.38403 * 119.94488 * 0.48684 * 27 25 24 29 29 F 1.35103 * 120.01252 * 179.78603 * 28 27 25 30 30 C 1.38490 * 119.97613 * 359.77117 * 28 27 25 31 31 C 1.38192 * 120.02731 * 359.97438 * 30 28 27 32 32 C 1.53779 * 87.08432 * 25.43214 * 22 21 19 33 33 H 1.08996 * 109.47071 * 180.02562 * 1 2 3 34 34 H 1.09005 * 109.46906 * 300.00387 * 1 2 3 35 35 H 1.09004 * 109.46742 * 60.00059 * 1 2 3 36 36 H 1.07997 * 119.99088 * 0.02562 * 4 3 2 37 37 H 1.08995 * 109.46841 * 305.01968 * 6 5 4 38 38 H 0.96707 * 114.00017 * 179.97438 * 7 6 5 39 39 H 1.48500 * 109.99800 * 178.68078 * 8 6 5 40 40 H 1.48504 * 109.99793 * 299.99493 * 8 6 5 41 41 H 1.08000 * 119.93121 * 179.97438 * 9 5 4 42 42 H 1.08994 * 109.47548 * 329.99786 * 14 13 12 43 43 H 1.09003 * 109.47307 * 300.00091 * 15 14 13 44 44 H 1.09002 * 109.47575 * 59.99333 * 15 14 13 45 45 H 1.09001 * 109.47551 * 179.97438 * 15 14 13 46 46 H 0.97000 * 120.00317 * 0.28382 * 18 16 14 47 47 H 1.09007 * 113.61281 * 203.66562 * 21 19 18 48 48 H 1.08998 * 113.61888 * 334.48577 * 21 19 18 49 49 H 1.07998 * 120.03130 * 180.25614 * 27 25 24 50 50 H 1.07994 * 119.98886 * 179.97438 * 30 28 27 51 51 H 1.07996 * 119.97936 * 180.02562 * 31 30 28 52 52 H 1.09000 * 113.61513 * 220.01986 * 32 22 21 53 53 H 1.08999 * 113.61644 * 89.11386 * 32 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2931 2.3747 0.0048 5 6 1.9220 3.6062 -0.0010 6 6 1.1004 4.8696 -0.0021 7 8 0.3680 4.9625 1.2213 8 14 2.2283 6.3435 -0.1641 9 6 3.3019 3.6811 -0.0063 10 6 4.0605 2.5237 -0.0062 11 17 5.7938 2.6215 -0.0135 12 6 3.4359 1.2862 -0.0004 13 8 4.1796 0.1473 -0.0009 14 6 4.5399 -0.3927 1.2721 15 6 3.4607 -1.3741 1.7337 16 6 5.8583 -1.1136 1.1570 17 8 6.4330 -1.1599 0.0900 18 7 6.4017 -1.7016 2.2412 19 6 7.6863 -2.3972 2.1307 20 1 8.2891 -2.0426 1.2946 21 6 8.4597 -2.4770 3.4575 22 6 7.7097 -3.7928 3.7246 23 1 6.7611 -3.6569 4.2439 24 6 8.5698 -4.8622 4.3473 25 6 8.2384 -5.3822 5.5868 26 9 7.1437 -4.9315 6.2379 27 6 9.0259 -6.3680 6.1565 28 6 10.1496 -6.8254 5.4905 29 9 10.9216 -7.7843 6.0471 30 6 10.4823 -6.2999 4.2531 31 6 9.6925 -5.3197 3.6830 32 6 7.5655 -3.9287 2.1997 33 1 -0.3633 -1.0276 0.0005 34 1 -0.3633 0.5139 0.8900 35 1 -0.3633 0.5139 -0.8900 36 1 0.2146 2.3192 0.0089 37 1 0.4052 4.8502 -0.8413 38 1 -0.1840 5.7536 1.2902 39 1 1.4282 7.5940 -0.1984 40 1 3.1812 6.3814 0.9743 41 1 3.7893 4.6448 -0.0112 42 1 4.6300 0.4158 1.9975 43 1 2.5070 -0.8528 1.8169 44 1 3.3705 -2.1827 1.0083 45 1 3.7357 -1.7864 2.7045 46 1 5.9422 -1.6644 3.0946 47 1 9.5345 -2.6054 3.3293 48 1 8.2091 -1.6801 4.1576 49 1 8.7658 -6.7772 7.1215 50 1 11.3593 -6.6564 3.7334 51 1 9.9524 -4.9108 2.7178 52 1 6.5919 -4.3045 1.8849 53 1 8.3958 -4.4538 1.7276 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:49 Heat of formation + Delta-G solvation = -137.546318 kcal Electronic energy + Delta-G solvation = -42530.604400 eV Core-core repulsion = 36612.395586 eV Total energy + Delta-G solvation = -5918.208814 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.124 amu Computer time = 2.04 seconds Orbital eigenvalues (eV) -50.07643 -50.04794 -42.02215 -41.53118 -40.45285 -39.31370 -39.10286 -38.49329 -37.79200 -37.05063 -34.86592 -33.12523 -31.91184 -31.67501 -31.36750 -31.07447 -28.54302 -26.77316 -26.72577 -26.41678 -25.30602 -24.23530 -23.62992 -22.99726 -22.63779 -21.78147 -20.32671 -19.61246 -19.36034 -18.72409 -18.66663 -18.37758 -18.18856 -17.99275 -17.47268 -17.05533 -16.92769 -16.84745 -16.71751 -16.61764 -16.37776 -16.21883 -16.08022 -15.91827 -15.79719 -15.51224 -15.29029 -15.15302 -15.01878 -14.61065 -14.59523 -14.19726 -14.02877 -13.99794 -13.86298 -13.75343 -13.56785 -13.46868 -13.36549 -13.24719 -12.96380 -12.84280 -12.74801 -12.70957 -12.56307 -12.39944 -12.14759 -12.05121 -11.97209 -11.74296 -11.73619 -11.37975 -11.31081 -10.75651 -10.56764 -10.17027 -10.08306 -9.85852 -9.60105 -9.41651 -4.93814 -0.34520 -0.13079 -0.03729 -0.02698 0.85027 1.22880 1.44825 1.56456 1.61382 1.91098 2.14807 2.21160 2.27717 2.68480 2.81835 3.20519 3.29500 3.44357 3.47798 3.54143 3.60958 3.65501 3.67266 3.73351 3.78937 3.82800 3.86786 3.92893 3.97475 4.02629 4.06826 4.07624 4.17011 4.27288 4.36989 4.42678 4.57891 4.59566 4.67897 4.68847 4.71542 4.73832 4.75172 4.82772 4.82845 4.84572 4.90173 4.91016 5.00735 5.07749 5.09728 5.11012 5.15889 5.22091 5.25957 5.55845 5.72218 5.91377 6.31088 6.45668 6.56129 7.12577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.311 6.311 3 C 0.128 3.872 4 C -0.164 4.164 5 C -0.025 4.025 6 C -0.076 4.076 7 O -0.552 6.552 8 Si 0.741 3.259 9 C -0.138 4.138 10 C -0.023 4.023 11 Cl -0.048 7.048 12 C 0.053 3.947 13 O -0.305 6.305 14 C 0.072 3.928 15 C -0.161 4.161 16 C 0.521 3.479 17 O -0.555 6.555 18 N -0.698 5.698 19 C 0.115 3.885 20 H 0.092 0.908 21 C -0.123 4.123 22 C -0.071 4.071 23 H 0.105 0.895 24 C -0.111 4.111 25 C 0.117 3.883 26 F -0.137 7.137 27 C -0.198 4.198 28 C 0.107 3.893 29 F -0.142 7.142 30 C -0.155 4.155 31 C -0.056 4.056 32 C -0.137 4.137 33 H 0.119 0.881 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.163 0.837 37 H 0.112 0.888 38 H 0.400 0.600 39 H -0.276 1.276 40 H -0.296 1.296 41 H 0.152 0.848 42 H 0.099 0.901 43 H 0.078 0.922 44 H 0.062 0.938 45 H 0.097 0.903 46 H 0.415 0.585 47 H 0.112 0.888 48 H 0.085 0.915 49 H 0.151 0.849 50 H 0.162 0.838 51 H 0.171 0.829 52 H 0.069 0.931 53 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.889 2.471 0.512 5.502 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.224 6.224 3 C 0.081 3.919 4 C -0.182 4.182 5 C -0.026 4.026 6 C -0.185 4.185 7 O -0.363 6.363 8 Si 0.646 3.354 9 C -0.157 4.157 10 C -0.050 4.050 11 Cl -0.018 7.018 12 C 0.008 3.992 13 O -0.221 6.221 14 C 0.013 3.987 15 C -0.219 4.219 16 C 0.307 3.693 17 O -0.432 6.432 18 N -0.352 5.352 19 C 0.010 3.990 20 H 0.110 0.890 21 C -0.161 4.161 22 C -0.089 4.089 23 H 0.123 0.877 24 C -0.112 4.112 25 C 0.097 3.903 26 F -0.115 7.115 27 C -0.218 4.218 28 C 0.088 3.912 29 F -0.121 7.121 30 C -0.173 4.173 31 C -0.074 4.074 32 C -0.176 4.176 33 H 0.137 0.863 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.181 0.819 37 H 0.129 0.871 38 H 0.251 0.749 39 H -0.202 1.202 40 H -0.224 1.224 41 H 0.169 0.831 42 H 0.116 0.884 43 H 0.097 0.903 44 H 0.081 0.919 45 H 0.116 0.884 46 H 0.252 0.748 47 H 0.131 0.869 48 H 0.104 0.896 49 H 0.168 0.832 50 H 0.179 0.821 51 H 0.188 0.812 52 H 0.088 0.912 53 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -3.630 2.311 0.101 4.304 hybrid contribution -1.220 0.121 1.701 2.097 sum -4.850 2.432 1.802 5.717 Atomic orbital electron populations 1.23468 0.76016 1.05945 1.02699 1.86214 1.23490 1.25005 1.87721 1.19189 0.90439 0.86147 0.96154 1.21325 1.01770 0.90031 1.05117 1.19192 0.91976 0.94619 0.96765 1.24821 1.01130 1.02254 0.90305 1.86526 1.63004 1.48970 1.37773 0.94120 0.79137 0.74217 0.87887 1.20875 0.93157 0.97306 1.04340 1.21040 0.86017 0.93575 1.04399 1.98410 1.08351 1.98470 1.96605 1.17750 0.87365 0.85347 1.08765 1.86249 1.69826 1.38058 1.27928 1.22322 0.93032 0.97457 0.85872 1.22246 0.98190 0.98990 1.02442 1.20469 0.86190 0.78517 0.84110 1.90735 1.63134 1.60157 1.29140 1.45477 1.22624 1.55179 1.11875 1.21879 0.84633 0.92678 0.99796 0.89002 1.23425 1.00825 0.96310 0.95503 1.21539 0.98375 0.93058 0.95919 0.87725 1.19967 0.98257 0.99796 0.93193 1.17297 0.85199 0.95886 0.91892 1.91503 1.51292 1.87880 1.80876 1.21164 0.96547 1.00607 1.03466 1.17567 0.90550 0.89519 0.93587 1.91525 1.73855 1.61363 1.85360 1.21513 1.02902 0.98839 0.94093 1.21074 0.91587 0.94199 1.00493 1.23586 1.03901 0.95830 0.94264 0.86289 0.91227 0.91222 0.81927 0.87075 0.74928 1.20241 1.22359 0.83092 0.88356 0.90304 0.91934 0.88428 0.74791 0.86924 0.89609 0.83157 0.82070 0.81173 0.91179 0.87211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.69 8.23 -79.65 -0.66 -1.35 16 3 C 0.13 0.48 6.54 22.57 0.15 0.63 16 4 C -0.16 -0.04 8.67 22.36 0.19 0.16 16 5 C -0.02 -0.01 5.38 -19.86 -0.11 -0.12 16 6 C -0.08 0.29 2.79 71.24 0.20 0.49 16 7 O -0.55 1.21 12.81 -148.98 -1.91 -0.70 16 8 Si 0.74 -2.39 29.84 68.60 2.05 -0.35 16 9 C -0.14 -0.37 8.45 22.29 0.19 -0.18 16 10 C -0.02 -0.15 6.33 22.39 0.14 0.00 16 11 Cl -0.05 -0.37 28.50 -2.72 -0.08 -0.45 16 12 C 0.05 0.39 5.56 22.58 0.13 0.52 16 13 O -0.30 -3.12 8.48 -67.33 -0.57 -3.70 16 14 C 0.07 0.29 3.20 29.85 0.10 0.38 16 15 C -0.16 0.12 9.01 71.98 0.65 0.76 16 16 C 0.52 3.26 7.23 87.66 0.63 3.90 16 17 O -0.55 -8.72 16.10 16.00 0.26 -8.46 16 18 N -0.70 0.94 5.16 -440.03 -2.27 -1.33 16 19 C 0.12 -0.25 4.32 45.52 0.20 -0.05 16 20 H 0.09 0.19 7.46 -2.39 -0.02 0.17 16 21 C -0.12 0.76 7.29 31.12 0.23 0.99 16 22 C -0.07 0.35 3.78 -11.01 -0.04 0.30 16 23 H 0.10 -0.51 7.45 -2.39 -0.02 -0.52 16 24 C -0.11 0.28 5.29 -19.81 -0.10 0.18 16 25 C 0.12 0.13 7.24 22.37 0.16 0.29 16 26 F -0.14 -0.40 16.36 44.97 0.74 0.34 16 27 C -0.20 -0.32 10.01 22.36 0.22 -0.09 16 28 C 0.11 0.17 7.30 22.37 0.16 0.34 16 29 F -0.14 -0.67 17.27 44.97 0.78 0.10 16 30 C -0.15 0.43 10.02 22.32 0.22 0.65 16 31 C -0.06 0.28 8.61 22.26 0.19 0.47 16 32 C -0.14 0.56 7.25 31.12 0.23 0.78 16 33 H 0.12 -1.01 8.14 -2.39 -0.02 -1.03 16 34 H 0.07 -0.53 7.65 -2.38 -0.02 -0.55 16 35 H 0.07 -0.52 7.67 -2.38 -0.02 -0.54 16 36 H 0.16 -0.71 6.30 -2.91 -0.02 -0.72 16 37 H 0.11 -1.00 7.96 -2.39 -0.02 -1.02 16 38 H 0.40 -4.02 8.74 -74.05 -0.65 -4.67 16 39 H -0.28 -0.03 7.11 99.48 0.71 0.68 16 40 H -0.30 -1.29 7.05 99.48 0.70 -0.59 16 41 H 0.15 0.01 4.85 -2.91 -0.01 0.00 16 42 H 0.10 0.11 7.91 -2.39 -0.02 0.09 16 43 H 0.08 -0.02 6.31 -2.39 -0.02 -0.04 16 44 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 45 H 0.10 -0.65 7.57 -2.39 -0.02 -0.67 16 46 H 0.41 -2.93 8.13 -92.71 -0.75 -3.68 16 47 H 0.11 -0.91 7.72 -2.38 -0.02 -0.92 16 48 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 49 H 0.15 0.02 8.06 -2.91 -0.02 -0.01 16 50 H 0.16 -1.05 8.06 -2.91 -0.02 -1.08 16 51 H 0.17 -1.74 6.65 -2.91 -0.02 -1.75 16 52 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 53 H 0.11 -0.71 6.31 -2.39 -0.02 -0.73 16 Total: 0.00 -25.48 458.37 2.84 -22.65 By element: Atomic # 1 Polarization: -17.85 SS G_CDS: -0.35 Total: -18.20 kcal Atomic # 6 Polarization: 6.59 SS G_CDS: 4.85 Total: 11.44 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -2.27 Total: -1.33 kcal Atomic # 8 Polarization: -11.33 SS G_CDS: -2.88 Total: -14.21 kcal Atomic # 9 Polarization: -1.07 SS G_CDS: 1.51 Total: 0.44 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.05 Total: -0.35 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -0.08 Total: -0.45 kcal Total: -25.48 2.84 -22.65 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.897 kcal (2) G-P(sol) polarization free energy of solvation -25.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.382 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.835 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.04 seconds