Wall clock time and date at job start Sun Mar 7 2021 00:07:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47152 * 2 1 4 4 C 1.50697 * 109.47172 * 120.00432 * 2 1 3 5 5 C 1.32691 * 124.68458 * 64.72102 * 4 2 1 6 6 C 1.44511 * 113.09463 * 180.26595 * 5 4 2 7 7 C 1.47045 * 123.48911 * 179.97438 * 6 5 4 8 8 O 1.21654 * 119.99903 * 179.97438 * 7 6 5 9 9 N 1.34783 * 120.00125 * 359.97438 * 7 6 5 10 10 C 1.46494 * 119.99937 * 180.02562 * 9 7 6 11 11 H 1.08993 * 112.85576 * 23.79867 * 10 9 7 12 12 C 1.53789 * 113.61572 * 154.99778 * 10 9 7 13 13 C 1.53781 * 87.07833 * 89.11229 * 12 10 9 14 14 H 1.09000 * 113.61622 * 270.79703 * 13 12 10 15 15 C 1.50705 * 113.61280 * 139.98304 * 13 12 10 16 16 C 1.38186 * 119.98592 * 300.00083 * 15 13 12 17 17 C 1.38232 * 120.04793 * 180.02562 * 16 15 13 18 18 C 1.38456 * 120.02402 * 359.96728 * 17 16 15 19 19 F 1.35098 * 120.00795 * 179.97438 * 18 17 16 20 20 C 1.38433 * 119.97562 * 0.02562 * 18 17 16 21 21 C 1.38393 * 119.95169 * 359.76354 * 20 18 17 22 22 F 1.35105 * 120.01475 * 180.23321 * 21 20 18 23 23 C 1.53772 * 87.08454 * 25.43333 * 13 12 10 24 24 C 1.36219 * 113.01793 * 0.02562 * 6 5 4 25 25 Cl 1.73595 * 124.60467 * 179.97438 * 24 6 5 26 26 S 1.70442 * 110.79152 * 0.02562 * 24 6 5 27 27 H 0.96694 * 113.99648 * 300.00138 * 1 2 3 28 28 H 1.09003 * 109.47226 * 240.00395 * 2 1 3 29 29 H 1.48496 * 110.00094 * 178.67907 * 3 2 1 30 30 H 1.48500 * 110.00169 * 300.00340 * 3 2 1 31 31 H 1.07997 * 123.45062 * 0.24611 * 5 4 2 32 32 H 0.97000 * 120.00130 * 359.97438 * 9 7 6 33 33 H 1.08996 * 113.61508 * 203.65680 * 12 10 9 34 34 H 1.08998 * 113.61048 * 334.47961 * 12 10 9 35 35 H 1.08000 * 119.97639 * 359.97230 * 16 15 13 36 36 H 1.07997 * 119.98635 * 179.97438 * 17 16 15 37 37 H 1.08002 * 120.02329 * 179.97438 * 20 18 17 38 38 H 1.09002 * 113.61644 * 220.01850 * 23 13 12 39 39 H 1.09000 * 113.61360 * 89.11408 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.7438 -1.9986 1.4880 6 6 2.3273 -2.4166 2.7422 7 6 2.2548 -3.7941 3.2516 8 8 2.7697 -4.0765 4.3171 9 7 1.6180 -4.7439 2.5382 10 6 1.5453 -6.1161 3.0460 11 1 1.6530 -6.1729 4.1291 12 6 0.3456 -6.9109 2.5038 13 6 1.2537 -7.3340 1.3371 14 1 1.2269 -6.6467 0.4914 15 6 1.0784 -8.7735 0.9269 16 6 1.3170 -9.7851 1.8376 17 6 1.1571 -11.1059 1.4627 18 6 0.7570 -11.4167 0.1742 19 9 0.6013 -12.7077 -0.1921 20 6 0.5175 -10.4041 -0.7389 21 6 0.6737 -9.0819 -0.3612 22 9 0.4358 -8.0925 -1.2499 23 6 2.4439 -7.1036 2.2830 24 6 2.9505 -1.4022 3.4042 25 17 3.7501 -1.5690 4.9359 26 16 2.8372 0.0535 2.5249 27 1 -0.3932 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 3.5346 1.7703 0.0322 30 1 1.5615 2.4679 -1.2084 31 1 1.2095 -2.6660 0.8281 32 1 1.2071 -4.5187 1.6889 33 1 0.0447 -7.7391 3.1453 34 1 -0.4928 -6.2836 2.2010 35 1 1.6295 -9.5435 2.8428 36 1 1.3443 -11.8957 2.1751 37 1 0.2057 -10.6457 -1.7443 38 1 3.3001 -6.6318 1.8008 39 1 2.7166 -7.9845 2.8643 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:56 Heat of formation + Delta-G solvation = -69.309199 kcal Electronic energy + Delta-G solvation = -29507.722665 eV Core-core repulsion = 24785.602321 eV Total energy + Delta-G solvation = -4722.120343 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.034 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -50.05627 -50.00265 -41.69529 -40.50754 -39.20909 -38.61188 -37.87054 -37.00905 -34.54309 -32.00710 -31.79977 -31.42370 -27.16633 -26.89899 -26.75915 -25.42309 -24.24823 -22.90817 -22.35643 -20.91536 -20.35590 -19.50275 -19.30972 -18.29565 -18.08182 -17.84246 -17.37957 -17.03671 -16.89793 -16.57931 -16.53498 -16.33083 -16.01266 -15.95606 -15.77618 -15.51010 -15.32951 -15.05113 -14.77917 -14.53081 -14.30410 -14.16355 -13.99813 -13.85188 -13.62647 -13.54813 -13.02612 -12.88589 -12.64825 -12.57707 -12.40872 -12.19134 -12.10460 -11.94868 -11.83759 -11.43647 -10.90083 -10.69958 -10.21046 -10.13822 -9.94407 -9.72656 -9.64596 -5.33064 -0.63348 -0.23908 -0.18183 -0.10754 0.39821 0.65225 1.01064 1.06059 1.43020 1.75424 2.06719 2.19132 2.22755 2.77968 3.11803 3.19056 3.35528 3.36924 3.39405 3.50706 3.54937 3.71767 3.78109 3.80953 3.82720 3.93684 4.06833 4.19636 4.31086 4.47956 4.53842 4.61850 4.64852 4.69275 4.73362 4.78113 4.83169 4.85906 4.87422 4.96529 4.97562 5.16307 5.48728 5.65280 6.29757 6.38878 7.15646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.025 4.025 3 Si 0.651 3.349 4 C -0.235 4.235 5 C -0.070 4.070 6 C -0.161 4.161 7 C 0.580 3.420 8 O -0.515 6.515 9 N -0.708 5.708 10 C 0.123 3.877 11 H 0.110 0.890 12 C -0.135 4.135 13 C -0.076 4.076 14 H 0.103 0.897 15 C -0.114 4.114 16 C -0.060 4.060 17 C -0.159 4.159 18 C 0.127 3.873 19 F -0.130 7.130 20 C -0.190 4.190 21 C 0.133 3.867 22 F -0.129 7.129 23 C -0.142 4.142 24 C -0.113 4.113 25 Cl 0.027 6.973 26 S 0.238 5.762 27 H 0.382 0.618 28 H 0.128 0.872 29 H -0.234 1.234 30 H -0.228 1.228 31 H 0.157 0.843 32 H 0.401 0.599 33 H 0.101 0.899 34 H 0.080 0.920 35 H 0.146 0.854 36 H 0.145 0.855 37 H 0.149 0.851 38 H 0.078 0.922 39 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.825 2.814 -0.067 3.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.365 3.635 8 O -0.391 6.391 9 N -0.360 5.360 10 C 0.018 3.982 11 H 0.128 0.872 12 C -0.173 4.173 13 C -0.094 4.094 14 H 0.121 0.879 15 C -0.116 4.116 16 C -0.078 4.078 17 C -0.178 4.178 18 C 0.108 3.892 19 F -0.108 7.108 20 C -0.210 4.210 21 C 0.114 3.886 22 F -0.107 7.107 23 C -0.181 4.181 24 C -0.260 4.260 25 Cl 0.057 6.943 26 S 0.502 5.498 27 H 0.230 0.770 28 H 0.145 0.855 29 H -0.158 1.158 30 H -0.151 1.151 31 H 0.174 0.826 32 H 0.236 0.764 33 H 0.120 0.880 34 H 0.099 0.901 35 H 0.163 0.837 36 H 0.163 0.837 37 H 0.167 0.833 38 H 0.096 0.904 39 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.300 4.353 0.080 4.364 hybrid contribution -0.649 -2.213 -1.047 2.533 sum -0.949 2.139 -0.967 2.532 Atomic orbital electron populations 1.86546 1.16303 1.81641 1.49264 1.24434 0.85391 1.09149 0.94839 0.95096 0.82381 0.77228 0.90276 1.24800 1.08916 0.98726 1.02830 1.21001 0.99056 0.95075 0.94846 1.20192 1.06067 0.94766 0.96902 1.17384 0.78380 0.83577 0.84134 1.90882 1.45187 1.81679 1.21370 1.45487 1.57457 1.08523 1.24502 1.21821 0.96242 0.80238 0.99949 0.87176 1.23451 0.96818 1.00235 0.96746 1.21563 0.98019 0.91861 0.97941 0.87879 1.19803 1.02714 0.96789 0.92246 1.20778 0.96683 0.90584 0.99747 1.21260 1.03109 0.98194 0.95222 1.17337 1.00167 0.78397 0.93325 1.91559 1.92967 1.34254 1.92070 1.21078 1.06916 0.90997 1.01961 1.17144 1.00084 0.84374 0.87037 1.91530 1.91742 1.60182 1.67261 1.23588 0.97005 0.99903 0.97605 1.25534 1.03736 1.00545 0.96203 1.98444 1.76009 1.97298 1.22591 1.83301 1.50773 1.06403 1.09280 0.76969 0.85477 1.15840 1.15127 0.82596 0.76378 0.88034 0.90148 0.83658 0.83745 0.83313 0.90374 0.88383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.16 12.88 -35.23 -0.45 0.71 16 2 C -0.02 0.06 2.94 36.00 0.11 0.17 16 3 Si 0.65 -1.76 30.92 -169.99 -5.26 -7.01 16 4 C -0.24 0.44 5.65 -36.20 -0.20 0.24 16 5 C -0.07 0.10 9.75 -39.00 -0.38 -0.28 16 6 C -0.16 -0.14 5.98 -104.58 -0.63 -0.76 16 7 C 0.58 1.17 7.79 -12.69 -0.10 1.07 16 8 O -0.52 -2.74 14.51 5.23 0.08 -2.66 16 9 N -0.71 0.67 5.24 -54.21 -0.28 0.39 16 10 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 11 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 12 C -0.13 0.38 7.29 -25.91 -0.19 0.19 16 13 C -0.08 0.16 3.78 -90.96 -0.34 -0.19 16 14 H 0.10 -0.20 7.45 -51.93 -0.39 -0.59 16 15 C -0.11 0.11 5.30 -104.54 -0.55 -0.44 16 16 C -0.06 0.12 8.61 -39.60 -0.34 -0.22 16 17 C -0.16 0.17 10.03 -39.50 -0.40 -0.22 16 18 C 0.13 0.07 7.30 -39.43 -0.29 -0.21 16 19 F -0.13 -0.25 17.27 2.25 0.04 -0.21 16 20 C -0.19 -0.08 10.01 -39.45 -0.39 -0.48 16 21 C 0.13 0.06 7.24 -39.43 -0.29 -0.22 16 22 F -0.13 -0.17 16.36 2.25 0.04 -0.13 16 23 C -0.14 0.27 7.25 -25.92 -0.19 0.09 16 24 C -0.11 -0.14 6.87 30.01 0.21 0.06 16 25 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 26 S 0.24 -0.33 20.19 -107.50 -2.17 -2.50 16 27 H 0.38 -2.22 8.70 45.56 0.40 -1.82 16 28 H 0.13 -0.34 7.96 -51.93 -0.41 -0.75 16 29 H -0.23 0.14 7.11 56.52 0.40 0.54 16 30 H -0.23 -0.02 7.11 56.52 0.40 0.38 16 31 H 0.16 -0.53 7.10 -52.49 -0.37 -0.90 16 32 H 0.40 -1.24 7.24 -40.82 -0.30 -1.54 16 33 H 0.10 -0.35 7.72 -51.93 -0.40 -0.75 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 35 H 0.15 -0.60 6.65 -52.49 -0.35 -0.95 16 36 H 0.14 -0.39 8.06 -52.49 -0.42 -0.82 16 37 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 39 H 0.10 -0.28 6.31 -51.93 -0.33 -0.61 16 LS Contribution 367.88 15.07 5.54 5.54 Total: 0.00 -7.17 367.88 -11.57 -18.74 By element: Atomic # 1 Polarization: -6.41 SS G_CDS: -3.43 Total: -9.84 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: -4.27 Total: -1.69 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -0.28 Total: 0.39 kcal Atomic # 8 Polarization: -1.58 SS G_CDS: -0.38 Total: -1.96 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.08 Total: -0.35 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.26 Total: -7.01 kcal Atomic # 16 Polarization: -0.33 SS G_CDS: -2.17 Total: -2.50 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -7.17 -11.57 -18.74 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.564 kcal (2) G-P(sol) polarization free energy of solvation -7.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.745 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds