Wall clock time and date at job start Sun Mar 7 2021 00:07:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46947 * 2 1 4 4 C 1.50700 * 109.47157 * 239.99800 * 2 1 3 5 5 C 1.34172 * 125.44135 * 300.00261 * 4 2 1 6 6 C 1.47014 * 105.95795 * 180.02562 * 5 4 2 7 7 C 1.47380 * 127.19299 * 179.97438 * 6 5 4 8 8 O 1.21614 * 120.00238 * 0.02932 * 7 6 5 9 9 N 1.34780 * 119.99957 * 180.02562 * 7 6 5 10 10 C 1.46498 * 120.00141 * 180.02562 * 9 7 6 11 11 H 1.09010 * 112.84807 * 334.65819 * 10 9 7 12 12 C 1.53778 * 113.61888 * 105.85784 * 10 9 7 13 13 C 1.54055 * 86.98235 * 89.16397 * 12 10 9 14 14 H 1.08994 * 113.68792 * 270.87329 * 13 12 10 15 15 C 1.50701 * 113.61803 * 139.98247 * 13 12 10 16 16 C 1.38189 * 119.98541 * 322.49809 * 15 13 12 17 17 C 1.38230 * 120.05052 * 179.97438 * 16 15 13 18 18 C 1.38454 * 120.02330 * 0.05339 * 17 16 15 19 19 F 1.35107 * 120.01375 * 179.97438 * 18 17 16 20 20 C 1.38442 * 119.97496 * 359.97254 * 18 17 16 21 21 C 1.38401 * 119.95107 * 359.72501 * 20 18 17 22 22 F 1.35092 * 120.01414 * 180.30465 * 21 20 18 23 23 C 1.53782 * 87.07978 * 25.43056 * 13 12 10 24 24 C 1.36414 * 105.61702 * 0.02562 * 6 5 4 25 25 O 1.33654 * 108.39353 * 359.97438 * 24 6 5 26 26 H 0.96699 * 113.99903 * 59.99982 * 1 2 3 27 27 H 1.09001 * 109.47000 * 119.99732 * 2 1 3 28 28 H 1.48496 * 110.00373 * 60.00289 * 3 2 1 29 29 H 1.48507 * 109.99617 * 181.31937 * 3 2 1 30 30 H 1.08000 * 127.01954 * 0.06587 * 5 4 2 31 31 H 0.96996 * 120.00072 * 359.97438 * 9 7 6 32 32 H 1.09004 * 113.61483 * 203.66363 * 12 10 9 33 33 H 1.08992 * 113.61493 * 334.56666 * 12 10 9 34 34 H 1.08002 * 119.97852 * 359.97438 * 16 15 13 35 35 H 1.08000 * 119.98913 * 180.02562 * 17 16 15 36 36 H 1.07999 * 120.02365 * 180.02562 * 20 18 17 37 37 H 1.08990 * 113.61533 * 220.02257 * 23 13 12 38 38 H 1.09004 * 113.61042 * 89.12156 * 23 13 12 39 39 H 1.08003 * 125.80741 * 180.02562 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.6753 -1.9881 -1.5501 6 6 2.3690 -2.2331 -2.8229 7 6 2.3984 -3.4886 -3.5943 8 8 1.8023 -4.4670 -3.1865 9 7 3.0860 -3.5524 -4.7518 10 6 3.1148 -4.8002 -5.5188 11 1 2.9495 -5.6818 -4.8993 12 6 2.2434 -4.7650 -6.7854 13 6 3.4812 -4.2205 -7.5234 14 1 3.5609 -3.1337 -7.5018 15 6 3.6601 -4.7929 -8.9060 16 6 3.3614 -6.1202 -9.1479 17 6 3.5245 -6.6465 -10.4156 18 6 3.9885 -5.8444 -11.4443 19 9 4.1484 -6.3591 -12.6832 20 6 4.2886 -4.5146 -11.2029 21 6 4.1190 -3.9871 -9.9347 22 9 4.4056 -2.6881 -9.6992 23 6 4.3316 -4.9221 -6.4513 24 6 2.9808 -1.0558 -3.1403 25 8 2.7070 -0.1663 -2.1810 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7703 -0.0321 30 1 1.0806 -2.6926 -0.9876 31 1 3.5612 -2.7719 -5.0773 32 1 1.9301 -5.7515 -7.1274 33 1 1.4192 -4.0541 -6.7287 34 1 3.0001 -6.7469 -8.3459 35 1 3.2903 -7.6839 -10.6037 36 1 4.6503 -3.8881 -12.0048 37 1 5.1919 -4.3378 -6.1252 38 1 4.5881 -5.9513 -6.7022 39 1 3.5831 -0.8732 -4.0179 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:07:59 Heat of formation + Delta-G solvation = -80.538883 kcal Electronic energy + Delta-G solvation = -27414.444433 eV Core-core repulsion = 22927.566247 eV Total energy + Delta-G solvation = -4486.878185 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.101 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.08924 -50.02007 -43.76462 -41.59574 -40.11358 -38.69314 -38.07999 -34.77955 -33.83104 -32.12955 -31.88029 -31.27791 -27.00171 -26.94065 -26.36909 -25.01236 -24.20449 -22.91234 -22.31196 -21.16702 -20.42603 -19.46808 -19.27691 -18.29904 -17.85047 -17.69959 -17.54788 -17.09424 -17.05950 -16.97039 -16.64591 -16.35584 -16.20422 -15.95482 -15.69780 -15.53595 -15.35374 -15.23506 -14.63718 -14.22691 -14.12954 -14.00931 -13.90789 -13.69503 -13.63831 -13.53984 -12.92523 -12.89901 -12.67413 -12.22315 -12.16862 -11.88797 -11.47957 -11.10379 -10.91807 -10.70245 -10.24035 -10.16348 -9.84292 -9.67512 -5.10108 -0.20665 -0.13069 0.17963 0.85535 1.09437 1.41767 1.73850 1.87303 1.94238 2.17483 2.28515 2.75504 3.14624 3.16270 3.32661 3.34284 3.36737 3.46941 3.51957 3.53963 3.69545 3.77543 3.86364 3.90566 4.04161 4.20687 4.31357 4.43902 4.50587 4.54654 4.59138 4.66001 4.69410 4.74749 4.75493 4.80750 4.84213 4.93449 4.94380 5.12384 5.19027 5.44156 5.62924 5.78704 6.34309 6.35979 7.13913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.029 4.029 3 Si 0.706 3.294 4 C -0.058 4.058 5 C -0.123 4.123 6 C -0.238 4.238 7 C 0.592 3.408 8 O -0.528 6.528 9 N -0.712 5.712 10 C 0.122 3.878 11 H 0.109 0.891 12 C -0.142 4.142 13 C -0.075 4.075 14 H 0.103 0.897 15 C -0.115 4.115 16 C -0.060 4.060 17 C -0.159 4.159 18 C 0.128 3.872 19 F -0.130 7.130 20 C -0.190 4.190 21 C 0.133 3.867 22 F -0.129 7.129 23 C -0.134 4.134 24 C 0.032 3.968 25 O -0.165 6.165 26 H 0.384 0.616 27 H 0.133 0.867 28 H -0.247 1.247 29 H -0.253 1.253 30 H 0.162 0.838 31 H 0.399 0.601 32 H 0.098 0.902 33 H 0.078 0.922 34 H 0.146 0.854 35 H 0.145 0.855 36 H 0.149 0.851 37 H 0.080 0.920 38 H 0.102 0.898 39 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.277 2.546 -2.102 3.540 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.606 3.394 4 C -0.106 4.106 5 C -0.143 4.143 6 C -0.243 4.243 7 C 0.379 3.621 8 O -0.404 6.404 9 N -0.363 5.363 10 C 0.017 3.983 11 H 0.127 0.873 12 C -0.181 4.181 13 C -0.093 4.093 14 H 0.122 0.878 15 C -0.116 4.116 16 C -0.078 4.078 17 C -0.178 4.178 18 C 0.108 3.892 19 F -0.108 7.108 20 C -0.210 4.210 21 C 0.114 3.886 22 F -0.107 7.107 23 C -0.172 4.172 24 C -0.038 4.038 25 O -0.061 6.061 26 H 0.232 0.768 27 H 0.151 0.849 28 H -0.171 1.171 29 H -0.177 1.177 30 H 0.180 0.820 31 H 0.233 0.767 32 H 0.116 0.884 33 H 0.097 0.903 34 H 0.163 0.837 35 H 0.163 0.837 36 H 0.167 0.833 37 H 0.098 0.902 38 H 0.120 0.880 39 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 1.517 2.445 -0.819 2.992 hybrid contribution 0.462 -0.323 -0.638 0.852 sum 1.979 2.122 -1.457 3.247 Atomic orbital electron populations 1.86580 1.16029 1.81744 1.49125 1.24450 0.85291 1.11334 0.92839 0.94259 0.81401 0.76527 0.87230 1.22753 0.99753 0.94236 0.93875 1.22533 1.01148 0.95429 0.95152 1.21493 1.07882 0.95061 0.99815 1.17251 0.78314 0.86691 0.79795 1.90826 1.43625 1.36836 1.69112 1.45497 1.53467 1.14396 1.22980 1.21827 0.96470 0.88060 0.91963 0.87301 1.23637 0.96683 1.02734 0.95037 1.21611 0.97968 1.00469 0.89302 0.87841 1.19793 1.02474 0.94247 0.95100 1.20782 0.96741 0.93765 0.96498 1.21264 1.02810 1.01315 0.92383 1.17345 0.99874 0.91479 0.80494 1.91564 1.93030 1.86929 1.39310 1.21084 1.06675 0.95517 0.97675 1.17133 0.99671 0.78829 0.92991 1.91523 1.90901 1.33374 1.94930 1.23444 0.96904 1.02449 0.94413 1.24474 0.99468 0.87085 0.92791 1.83690 1.54560 1.39992 1.27868 0.76784 0.84948 1.17130 1.17729 0.81998 0.76656 0.88359 0.90290 0.83659 0.83734 0.83298 0.90168 0.87987 0.76992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.35 12.86 -35.23 -0.45 -0.10 16 2 C -0.03 0.03 2.97 36.01 0.11 0.14 16 3 Si 0.71 -1.25 32.09 -169.99 -5.45 -6.71 16 4 C -0.06 0.00 6.20 -35.74 -0.22 -0.22 16 5 C -0.12 -0.19 10.88 -37.46 -0.41 -0.60 16 6 C -0.24 -0.16 6.31 -103.28 -0.65 -0.81 16 7 C 0.59 1.11 7.81 -12.54 -0.10 1.01 16 8 O -0.53 -3.24 16.60 5.26 0.09 -3.16 16 9 N -0.71 1.18 5.26 -54.10 -0.28 0.90 16 10 C 0.12 -0.22 4.29 -67.12 -0.29 -0.51 16 11 H 0.11 -0.02 7.50 -51.92 -0.39 -0.40 16 12 C -0.14 0.34 7.27 -25.78 -0.19 0.15 16 13 C -0.08 0.21 3.79 -90.81 -0.34 -0.14 16 14 H 0.10 -0.30 7.44 -51.93 -0.39 -0.68 16 15 C -0.12 0.17 5.30 -104.55 -0.55 -0.38 16 16 C -0.06 0.14 8.61 -39.60 -0.34 -0.20 16 17 C -0.16 0.22 10.03 -39.50 -0.40 -0.17 16 18 C 0.13 0.03 7.30 -39.43 -0.29 -0.26 16 19 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 20 C -0.19 0.00 10.01 -39.45 -0.39 -0.39 16 21 C 0.13 -0.01 7.24 -39.43 -0.29 -0.30 16 22 F -0.13 -0.08 16.36 2.25 0.04 -0.04 16 23 C -0.13 0.45 7.29 -25.92 -0.19 0.26 16 24 C 0.03 -0.07 11.61 30.07 0.35 0.28 16 25 O -0.17 0.14 8.89 7.65 0.07 0.21 16 26 H 0.38 -1.76 8.70 45.56 0.40 -1.36 16 27 H 0.13 -0.16 7.96 -51.93 -0.41 -0.57 16 28 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 29 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 30 H 0.16 0.35 8.06 -52.49 -0.42 -0.08 16 31 H 0.40 -1.83 7.67 -40.82 -0.31 -2.14 16 32 H 0.10 -0.31 6.32 -51.93 -0.33 -0.64 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.15 -0.65 6.66 -52.49 -0.35 -1.00 16 35 H 0.14 -0.43 8.06 -52.49 -0.42 -0.86 16 36 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 37 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 38 H 0.10 -0.40 7.72 -51.93 -0.40 -0.80 16 39 H 0.21 -1.43 7.47 -52.48 -0.39 -1.83 16 LS Contribution 348.35 15.07 5.25 5.25 Total: 0.00 -9.05 348.35 -8.79 -17.84 By element: Atomic # 1 Polarization: -7.99 SS G_CDS: -3.89 Total: -11.88 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -4.19 Total: -2.14 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.28 Total: 0.90 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -0.30 Total: -3.05 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.08 Total: -0.22 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.45 Total: -6.71 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -9.05 -8.79 -17.84 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.696 kcal (2) G-P(sol) polarization free energy of solvation -9.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds