Wall clock time and date at job start Sun Mar 7 2021 00:08:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37869 * 126.45596 * 2 1 4 4 C 1.46673 * 126.23644 * 0.04007 * 3 2 1 5 5 O 1.21697 * 119.99843 * 359.97438 * 4 3 2 6 6 N 1.34780 * 119.99929 * 179.97438 * 4 3 2 7 7 C 1.46501 * 119.99508 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.85081 * 23.80605 * 7 6 4 9 9 C 1.53779 * 113.61128 * 154.99987 * 7 6 4 10 10 C 1.53783 * 87.08448 * 89.19793 * 9 7 6 11 11 H 1.08996 * 113.61495 * 270.80550 * 10 9 7 12 12 C 1.50698 * 113.61655 * 139.97989 * 10 9 7 13 13 C 1.38443 * 119.98736 * 120.00471 * 12 10 9 14 14 F 1.35097 * 120.01320 * 0.02562 * 13 12 10 15 15 C 1.38441 * 119.97369 * 180.02562 * 13 12 10 16 16 C 1.38395 * 119.95125 * 0.02562 * 15 13 12 17 17 F 1.35099 * 120.01356 * 180.02562 * 16 15 13 18 18 C 1.38497 * 119.97503 * 359.97438 * 16 15 13 19 19 C 1.38183 * 120.02410 * 0.26179 * 18 16 15 20 20 C 1.53779 * 113.68978 * 252.53329 * 7 6 4 21 21 N 1.37651 * 107.52995 * 180.29335 * 3 2 1 22 22 C 1.35537 * 108.64586 * 359.57291 * 21 3 2 23 23 C 1.50700 * 125.56604 * 180.13025 * 22 21 3 24 24 O 1.42902 * 109.47124 * 300.32755 * 23 22 21 25 25 Si 1.86293 * 109.47123 * 180.32943 * 23 22 21 26 26 C 1.35447 * 108.86893 * 0.43572 * 22 21 3 27 27 H 1.08998 * 109.46601 * 89.99609 * 1 2 3 28 28 H 1.08999 * 109.47077 * 209.99390 * 1 2 3 29 29 H 1.08995 * 109.47185 * 330.00025 * 1 2 3 30 30 H 0.96997 * 119.99864 * 359.97438 * 6 4 3 31 31 H 1.09005 * 113.61805 * 334.65006 * 9 7 6 32 32 H 1.08999 * 113.69145 * 203.76022 * 9 7 6 33 33 H 1.08001 * 120.02402 * 180.02562 * 15 13 12 34 34 H 1.08002 * 119.98574 * 179.97438 * 18 16 15 35 35 H 1.07995 * 119.97787 * 179.74752 * 19 18 16 36 36 H 1.09000 * 113.61497 * 156.32789 * 20 7 6 37 37 H 1.09003 * 113.61449 * 25.42400 * 20 7 6 38 38 H 0.97003 * 125.68116 * 179.69768 * 21 3 2 39 39 H 1.09003 * 109.47242 * 60.32342 * 23 22 21 40 40 H 0.96704 * 114.00224 * 299.99986 * 24 23 22 41 41 H 1.48500 * 110.00405 * 58.68055 * 25 23 22 42 42 H 1.48500 * 110.00078 * 180.02562 * 25 23 22 43 43 H 1.08005 * 126.07033 * 179.69771 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 0.0008 5 8 0.7027 2.7766 0.0011 6 7 2.8038 3.4998 0.0012 7 6 2.3679 4.8985 0.0015 8 1 1.3645 5.0290 0.4068 9 6 3.4037 5.8664 0.5974 10 6 3.9842 5.9941 -0.8209 11 1 4.7519 5.2541 -1.0467 12 6 4.4008 7.3975 -1.1785 13 6 5.7178 7.6646 -1.5117 14 9 6.6291 6.6674 -1.5168 15 6 6.1003 8.9541 -1.8397 16 6 5.1657 9.9748 -1.8336 17 9 5.5376 11.2335 -2.1540 18 6 3.8489 9.7052 -1.4999 19 6 3.4692 8.4187 -1.1680 20 6 2.5878 5.6145 -1.3416 21 7 3.6284 0.6624 -0.0067 22 6 3.6218 -0.6929 -0.0012 23 6 4.8434 -1.5754 -0.0029 24 8 5.6229 -1.3076 -1.1702 25 14 4.3182 -3.3628 -0.0036 26 6 2.3380 -1.1247 -0.0009 27 1 -0.3632 0.0001 -1.0277 28 1 -0.3633 -0.8900 0.5137 29 1 -0.3633 0.8899 0.5138 30 1 3.7501 3.2867 0.0014 31 1 4.0841 5.3953 1.3069 32 1 2.9707 6.7919 0.9770 33 1 7.1274 9.1633 -2.1002 34 1 3.1195 10.5017 -1.4947 35 1 2.4430 8.2101 -0.9040 36 1 1.9305 6.4707 -1.4927 37 1 2.6095 4.9399 -2.1975 38 1 4.4191 1.2243 -0.0124 39 1 5.4397 -1.3722 0.8866 40 1 5.1546 -1.4671 -2.0011 41 1 3.4780 -3.6449 -1.1951 42 1 5.5139 -4.2435 -0.0046 43 1 2.0136 -2.1549 -0.0017 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:02 Heat of formation + Delta-G solvation = -61.694188 kcal Electronic energy + Delta-G solvation = -29708.896476 eV Core-core repulsion = 25165.016501 eV Total energy + Delta-G solvation = -4543.879975 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.10138 -50.03280 -42.64109 -41.50748 -40.01018 -38.72022 -37.91162 -34.86972 -33.42792 -32.12626 -31.86612 -31.24189 -28.17265 -27.28626 -26.95966 -26.02309 -24.41021 -23.29089 -22.61480 -21.63871 -20.65063 -20.27437 -19.62421 -19.33525 -18.36302 -18.18822 -17.47467 -17.07597 -17.01171 -16.78772 -16.69059 -16.37882 -16.36307 -16.05058 -15.58579 -15.49544 -15.41400 -15.32095 -14.95735 -14.66801 -14.35821 -14.09438 -13.95279 -13.82092 -13.68924 -13.61519 -13.55447 -13.49514 -12.96147 -12.91531 -12.68821 -12.27669 -12.22807 -11.90716 -11.89334 -11.49949 -11.11907 -10.85946 -10.28277 -10.19048 -9.84447 -9.69053 -9.18958 -5.00059 -0.22009 -0.14343 0.33033 1.08707 1.52698 1.57998 1.80077 1.91662 2.12751 2.16252 2.31483 2.74297 3.13366 3.16283 3.31089 3.34617 3.44496 3.48370 3.50242 3.66763 3.75418 3.77244 3.88143 4.02332 4.13204 4.18484 4.35798 4.41307 4.48439 4.57209 4.63436 4.67756 4.72542 4.72751 4.79038 4.81474 4.82870 4.90259 4.92929 5.01137 5.10087 5.20436 5.35232 5.45281 5.61595 5.62571 5.88387 6.17205 6.22141 6.38587 7.09191 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.062 4.062 3 C -0.058 4.058 4 C 0.594 3.406 5 O -0.518 6.518 6 N -0.717 5.717 7 C 0.123 3.877 8 H 0.112 0.888 9 C -0.135 4.135 10 C -0.076 4.076 11 H 0.101 0.899 12 C -0.115 4.115 13 C 0.133 3.867 14 F -0.129 7.129 15 C -0.190 4.190 16 C 0.128 3.872 17 F -0.130 7.130 18 C -0.159 4.159 19 C -0.060 4.060 20 C -0.142 4.142 21 N -0.525 5.525 22 C 0.029 3.971 23 C -0.062 4.062 24 O -0.534 6.534 25 Si 0.717 3.283 26 C -0.200 4.200 27 H 0.069 0.931 28 H 0.066 0.934 29 H 0.081 0.919 30 H 0.395 0.605 31 H 0.078 0.922 32 H 0.103 0.897 33 H 0.149 0.851 34 H 0.145 0.855 35 H 0.146 0.854 36 H 0.099 0.901 37 H 0.077 0.923 38 H 0.416 0.584 39 H 0.120 0.880 40 H 0.380 0.620 41 H -0.255 1.255 42 H -0.255 1.255 43 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.161 -1.079 2.135 2.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.170 4.170 4 C 0.383 3.617 5 O -0.394 6.394 6 N -0.368 5.368 7 C 0.018 3.982 8 H 0.130 0.870 9 C -0.173 4.173 10 C -0.094 4.094 11 H 0.120 0.880 12 C -0.116 4.116 13 C 0.113 3.887 14 F -0.108 7.108 15 C -0.209 4.209 16 C 0.108 3.892 17 F -0.108 7.108 18 C -0.177 4.177 19 C -0.078 4.078 20 C -0.181 4.181 21 N -0.121 5.121 22 C -0.089 4.089 23 C -0.171 4.171 24 O -0.341 6.341 25 Si 0.616 3.384 26 C -0.224 4.224 27 H 0.087 0.913 28 H 0.085 0.915 29 H 0.100 0.900 30 H 0.228 0.772 31 H 0.097 0.903 32 H 0.121 0.879 33 H 0.167 0.833 34 H 0.163 0.837 35 H 0.164 0.836 36 H 0.117 0.883 37 H 0.096 0.904 38 H 0.254 0.746 39 H 0.138 0.862 40 H 0.228 0.772 41 H -0.179 1.179 42 H -0.180 1.180 43 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.399 -1.338 2.139 2.554 hybrid contribution 1.645 0.961 -1.243 2.274 sum 1.246 -0.377 0.896 1.581 Atomic orbital electron populations 1.20402 0.88796 1.03346 1.02538 1.19946 0.96064 0.90296 1.00740 1.20192 0.83577 0.93409 1.19850 1.17012 0.85807 0.82907 0.75998 1.90844 1.15829 1.83089 1.49617 1.45567 1.09233 1.05606 1.76382 1.21824 0.99873 0.79648 0.96887 0.87021 1.23456 0.97974 1.00171 0.95664 1.21556 0.97908 0.92626 0.97307 0.88048 1.19787 0.91745 0.96952 1.03148 1.17140 0.86353 0.84515 1.00663 1.91526 1.65870 1.59493 1.93879 1.21084 1.01766 0.91393 1.06693 1.17341 0.92986 0.79378 0.99454 1.91562 1.92064 1.37214 1.89964 1.21264 0.94831 0.98673 1.02971 1.20777 0.99842 0.90624 0.96519 1.23592 0.95323 1.01014 0.98147 1.41854 1.07124 1.06593 1.56562 1.21050 0.96834 0.83268 1.07786 1.24919 0.91763 1.09149 0.91256 1.86598 1.42041 1.89511 1.15920 0.94246 0.82131 0.72412 0.89640 1.20611 0.90801 0.99153 1.11846 0.91280 0.91478 0.89974 0.77158 0.90292 0.87911 0.83291 0.83692 0.83636 0.88260 0.90402 0.74632 0.86175 0.77158 1.17872 1.18007 0.83160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.13 9.83 36.01 0.35 0.23 16 2 C -0.06 -0.11 6.21 -104.16 -0.65 -0.75 16 3 C -0.06 -0.07 7.06 -81.98 -0.58 -0.65 16 4 C 0.59 1.11 7.79 -12.85 -0.10 1.01 16 5 O -0.52 -2.59 14.40 5.19 0.07 -2.52 16 6 N -0.72 0.86 5.26 -54.32 -0.29 0.57 16 7 C 0.12 -0.20 4.32 -67.12 -0.29 -0.49 16 8 H 0.11 -0.04 7.46 -51.93 -0.39 -0.43 16 9 C -0.13 0.40 7.29 -25.92 -0.19 0.22 16 10 C -0.08 0.17 3.78 -90.96 -0.34 -0.17 16 11 H 0.10 -0.21 7.44 -51.93 -0.39 -0.59 16 12 C -0.12 0.13 5.30 -104.55 -0.55 -0.43 16 13 C 0.13 0.05 7.24 -39.43 -0.29 -0.24 16 14 F -0.13 -0.16 16.36 2.25 0.04 -0.13 16 15 C -0.19 -0.06 10.01 -39.45 -0.39 -0.46 16 16 C 0.13 0.06 7.30 -39.43 -0.29 -0.23 16 17 F -0.13 -0.23 17.27 2.25 0.04 -0.19 16 18 C -0.16 0.20 10.02 -39.51 -0.40 -0.20 16 19 C -0.06 0.13 8.59 -39.60 -0.34 -0.21 16 20 C -0.14 0.30 7.26 -25.92 -0.19 0.11 16 21 N -0.52 0.51 5.99 -5.70 -0.03 0.47 16 22 C 0.03 -0.02 6.47 -81.95 -0.53 -0.55 16 23 C -0.06 0.11 3.08 36.01 0.11 0.22 16 24 O -0.53 0.27 12.88 -35.23 -0.45 -0.18 16 25 Si 0.72 -1.59 30.54 -169.99 -5.19 -6.78 16 26 C -0.20 -0.01 9.27 -39.98 -0.37 -0.38 16 27 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.08 0.23 6.48 -51.93 -0.34 -0.10 16 30 H 0.39 -1.33 7.83 -40.82 -0.32 -1.65 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 32 H 0.10 -0.38 7.71 -51.93 -0.40 -0.78 16 33 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 34 H 0.15 -0.42 8.06 -52.49 -0.42 -0.84 16 35 H 0.15 -0.63 6.67 -52.49 -0.35 -0.98 16 36 H 0.10 -0.31 6.32 -51.93 -0.33 -0.64 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.42 -1.32 8.19 -40.82 -0.33 -1.65 16 39 H 0.12 -0.33 7.96 -51.93 -0.41 -0.75 16 40 H 0.38 -1.09 8.70 45.56 0.40 -0.69 16 41 H -0.25 0.00 7.11 56.52 0.40 0.40 16 42 H -0.26 -0.25 7.11 56.52 0.40 0.16 16 43 H 0.15 -0.27 6.17 -52.48 -0.32 -0.59 16 LS Contribution 367.36 15.07 5.54 5.54 Total: 0.00 -7.56 367.36 -10.23 -17.79 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -4.92 Total: -11.60 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -5.03 Total: -2.97 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.32 Total: 1.05 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.38 Total: -2.70 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.08 Total: -0.32 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.19 Total: -6.78 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -7.56 -10.23 -17.79 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.904 kcal (2) G-P(sol) polarization free energy of solvation -7.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds