Wall clock time and date at job start Sun Mar 7 2021 00:08:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86305 * 109.46676 * 2 1 4 4 C 1.50699 * 109.47057 * 119.99533 * 2 1 3 5 5 C 1.34848 * 125.89326 * 244.97271 * 4 2 1 6 6 C 1.40893 * 107.41713 * 180.02562 * 5 4 2 7 7 C 1.34847 * 107.41636 * 0.02562 * 6 5 4 8 8 C 1.50706 * 125.88682 * 180.02562 * 7 6 5 9 9 C 1.50698 * 109.47294 * 85.02354 * 8 7 6 10 10 O 1.21282 * 120.00025 * 359.97438 * 9 8 7 11 11 N 1.34776 * 120.00035 * 180.02562 * 9 8 7 12 12 C 1.46496 * 119.99846 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.85624 * 336.19226 * 12 11 9 14 14 C 1.53782 * 113.61524 * 107.50022 * 12 11 9 15 15 C 1.53785 * 87.08211 * 89.11527 * 14 12 11 16 16 H 1.09001 * 113.61140 * 270.88764 * 15 14 12 17 17 C 1.50693 * 113.69232 * 139.99518 * 15 14 12 18 18 C 1.38189 * 119.98591 * 322.46077 * 17 15 14 19 19 C 1.38235 * 120.04851 * 179.97438 * 18 17 15 20 20 C 1.38447 * 120.02738 * 359.97438 * 19 18 17 21 21 F 1.35101 * 120.01474 * 179.97438 * 20 19 18 22 22 C 1.38442 * 119.97181 * 0.02562 * 20 19 18 23 23 C 1.38392 * 119.95298 * 359.75703 * 22 20 19 24 24 F 1.35102 * 120.01539 * 180.23267 * 23 22 20 25 25 C 1.53785 * 113.61452 * 204.99807 * 12 11 9 26 26 N 1.36342 * 108.22125 * 0.25992 * 7 6 5 27 27 H 0.96703 * 113.99791 * 299.99637 * 1 2 3 28 28 H 1.08990 * 109.46934 * 239.99770 * 2 1 3 29 29 H 1.48504 * 109.99311 * 178.68359 * 3 2 1 30 30 H 1.48496 * 109.99961 * 299.99845 * 3 2 1 31 31 H 1.08001 * 126.29218 * 0.02562 * 5 4 2 32 32 H 1.08000 * 126.29104 * 180.02562 * 6 5 4 33 33 H 1.09001 * 109.46953 * 205.01797 * 8 7 6 34 34 H 1.09000 * 109.47318 * 325.01394 * 8 7 6 35 35 H 0.97002 * 119.99767 * 359.97438 * 11 9 8 36 36 H 1.08996 * 113.61532 * 203.66298 * 14 12 11 37 37 H 1.09001 * 113.61507 * 334.56982 * 14 12 11 38 38 H 1.07995 * 119.97757 * 359.97438 * 18 17 15 39 39 H 1.08004 * 119.98501 * 180.02562 * 19 18 17 40 40 H 1.08002 * 120.01867 * 179.97438 * 22 20 19 41 41 H 1.08994 * 113.61299 * 25.42820 * 25 12 11 42 42 H 1.08993 * 113.61788 * 156.33802 * 25 12 11 43 43 H 0.97000 * 125.63933 * 179.74575 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6306 -0.1487 2.2375 6 6 2.8984 -1.1605 3.1806 7 6 2.3531 -2.3020 2.7137 8 6 2.3936 -3.6445 3.3973 9 6 1.2613 -3.7385 4.3873 10 8 0.4970 -2.8069 4.5247 11 7 1.0986 -4.8574 5.1209 12 6 -0.0018 -4.9485 6.0836 13 1 -0.3506 -3.9726 6.4215 14 6 -1.1340 -5.8890 5.6380 15 6 -0.3607 -7.0215 6.3339 16 1 0.3600 -7.5205 5.6859 17 6 -1.2437 -7.9880 7.0804 18 6 -2.3541 -7.5251 7.7603 19 6 -3.1653 -8.4106 8.4451 20 6 -2.8663 -9.7624 8.4499 21 9 -3.6589 -10.6274 9.1197 22 6 -1.7540 -10.2271 7.7691 23 6 -0.9451 -9.3404 7.0801 24 9 0.1379 -9.7932 6.4114 25 6 0.2631 -5.9386 7.2301 26 7 1.7635 -2.0333 1.5142 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8899 29 1 3.5345 1.7703 0.0321 30 1 1.5614 2.4679 -1.2085 31 1 2.9302 0.8866 2.3081 32 1 3.4408 -1.0434 4.1072 33 1 2.2919 -4.4344 2.6531 34 1 3.3435 -3.7578 3.9198 35 1 1.7101 -5.6023 5.0112 36 1 -2.0946 -5.6666 6.1026 37 1 -1.2029 -6.0076 4.5567 38 1 -2.5884 -6.4709 7.7568 39 1 -4.0331 -8.0478 8.9758 40 1 -1.5198 -11.2814 7.7727 41 1 1.3220 -6.0973 7.4340 42 1 -0.3155 -5.7299 8.1298 43 1 1.2986 -2.6764 0.9562 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:07 Heat of formation + Delta-G solvation = -58.421426 kcal Electronic energy + Delta-G solvation = -29093.201674 eV Core-core repulsion = 24549.463617 eV Total energy + Delta-G solvation = -4543.738057 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.08653 -50.02346 -42.30886 -41.56509 -40.15969 -38.74795 -37.62991 -34.61917 -33.11691 -31.98169 -31.86068 -31.49626 -29.35829 -26.93199 -26.38325 -25.15761 -24.33490 -23.05470 -22.17389 -21.29041 -20.98157 -20.38228 -19.39164 -18.87946 -18.42868 -18.17123 -17.36003 -17.15856 -17.06033 -16.85650 -16.55961 -16.38063 -16.32914 -16.16148 -15.57811 -15.42854 -15.36206 -15.15784 -14.82169 -14.54899 -14.26336 -14.18166 -14.01151 -13.92594 -13.79159 -13.69697 -13.62290 -13.44140 -12.96476 -12.74562 -12.67367 -12.20995 -12.00650 -11.89762 -11.86559 -11.46918 -10.92467 -10.58086 -10.22377 -10.13324 -9.71449 -9.67566 -8.90394 -4.94158 -0.20743 -0.13271 1.15225 1.30017 1.57889 1.71524 1.90001 1.96901 2.17658 2.24726 2.50299 2.75433 3.16474 3.33098 3.36440 3.46691 3.49273 3.52442 3.60916 3.69633 3.77370 3.85290 3.89324 3.91919 3.99291 4.04676 4.33132 4.41922 4.44782 4.50925 4.58784 4.60015 4.66450 4.70770 4.75539 4.80575 4.82641 4.83064 4.93945 4.94584 5.13645 5.31987 5.35583 5.46825 5.62794 6.05938 6.20017 6.37338 6.56832 6.66010 7.17311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.050 4.050 3 Si 0.719 3.281 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.172 4.172 7 C 0.035 3.965 8 C -0.072 4.072 9 C 0.515 3.485 10 O -0.519 6.519 11 N -0.717 5.717 12 C 0.122 3.878 13 H 0.108 0.892 14 C -0.143 4.143 15 C -0.075 4.075 16 H 0.103 0.897 17 C -0.115 4.115 18 C -0.060 4.060 19 C -0.159 4.159 20 C 0.127 3.873 21 F -0.130 7.130 22 C -0.190 4.190 23 C 0.133 3.867 24 F -0.129 7.129 25 C -0.134 4.134 26 N -0.536 5.536 27 H 0.383 0.617 28 H 0.109 0.891 29 H -0.255 1.255 30 H -0.256 1.256 31 H 0.142 0.858 32 H 0.136 0.864 33 H 0.099 0.901 34 H 0.118 0.882 35 H 0.402 0.598 36 H 0.097 0.903 37 H 0.076 0.924 38 H 0.146 0.854 39 H 0.145 0.855 40 H 0.149 0.851 41 H 0.080 0.920 42 H 0.100 0.900 43 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.271 -0.612 2.048 2.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.619 3.381 4 C -0.124 4.124 5 C -0.212 4.212 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.113 4.113 9 C 0.300 3.700 10 O -0.393 6.393 11 N -0.369 5.369 12 C 0.016 3.984 13 H 0.126 0.874 14 C -0.181 4.181 15 C -0.093 4.093 16 H 0.121 0.879 17 C -0.116 4.116 18 C -0.078 4.078 19 C -0.178 4.178 20 C 0.108 3.892 21 F -0.108 7.108 22 C -0.210 4.210 23 C 0.114 3.886 24 F -0.107 7.107 25 C -0.172 4.172 26 N -0.130 5.130 27 H 0.231 0.769 28 H 0.126 0.874 29 H -0.179 1.179 30 H -0.181 1.181 31 H 0.159 0.841 32 H 0.154 0.846 33 H 0.118 0.882 34 H 0.136 0.864 35 H 0.236 0.764 36 H 0.115 0.885 37 H 0.095 0.905 38 H 0.163 0.837 39 H 0.163 0.837 40 H 0.167 0.833 41 H 0.098 0.902 42 H 0.119 0.881 43 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 1.228 0.219 1.060 1.637 hybrid contribution 0.162 -1.992 -0.341 2.028 sum 1.390 -1.773 0.719 2.365 Atomic orbital electron populations 1.86470 1.17306 1.81883 1.49548 1.24825 0.85048 1.10678 0.95461 0.93985 0.80870 0.76627 0.86593 1.20848 1.07146 0.84361 1.00004 1.20646 1.05560 0.99502 0.95489 1.20588 1.06534 0.91678 1.00897 1.19461 1.03806 0.95837 0.88768 1.20132 0.99194 0.94481 0.97480 1.20605 0.85981 0.82044 0.81324 1.90770 1.45069 1.37179 1.66269 1.45690 1.31817 1.18201 1.41226 1.21806 0.87471 0.99848 0.89275 0.87399 1.23582 0.98363 0.94556 1.01620 1.21556 0.97247 0.93134 0.97398 0.87875 1.19802 0.98177 0.92134 1.01502 1.20779 0.92320 1.00442 0.94253 1.21264 1.02436 0.91299 1.02778 1.17339 0.89927 0.87508 0.94424 1.91562 1.72263 1.69234 1.77771 1.21083 0.96281 1.01791 1.01797 1.17139 0.85345 0.91552 0.94611 1.91527 1.51813 1.89536 1.77858 1.23444 1.02334 0.94119 0.97348 1.41800 1.44287 1.09094 1.17840 0.76939 0.87399 1.17918 1.18070 0.84062 0.84563 0.88234 0.86419 0.76378 0.88493 0.90542 0.83678 0.83728 0.83305 0.90171 0.88132 0.75151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.63 12.88 -35.23 -0.45 -1.08 16 2 C -0.05 -0.03 3.08 36.01 0.11 0.09 16 3 Si 0.72 -0.38 30.60 -169.99 -5.20 -5.58 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.32 9.37 -39.78 -0.37 -0.70 16 6 C -0.17 -0.34 10.76 -39.78 -0.43 -0.77 16 7 C 0.03 0.04 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.15 6.24 -29.03 -0.18 -0.03 16 9 C 0.51 0.04 7.82 -10.99 -0.09 -0.05 16 10 O -0.52 -2.41 15.63 5.56 0.09 -2.32 16 11 N -0.72 1.77 5.26 -53.02 -0.28 1.50 16 12 C 0.12 -0.25 4.32 -67.12 -0.29 -0.54 16 13 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 14 C -0.14 0.35 7.25 -25.92 -0.19 0.16 16 15 C -0.08 0.20 3.78 -90.96 -0.34 -0.15 16 16 H 0.10 -0.27 7.44 -51.93 -0.39 -0.65 16 17 C -0.12 0.15 5.30 -104.55 -0.55 -0.40 16 18 C -0.06 0.13 8.61 -39.60 -0.34 -0.21 16 19 C -0.16 0.21 10.02 -39.51 -0.40 -0.18 16 20 C 0.13 0.04 7.30 -39.43 -0.29 -0.25 16 21 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 22 C -0.19 -0.03 10.01 -39.45 -0.39 -0.42 16 23 C 0.13 0.01 7.24 -39.43 -0.29 -0.27 16 24 F -0.13 -0.12 16.36 2.25 0.04 -0.08 16 25 C -0.13 0.45 7.29 -25.91 -0.19 0.26 16 26 N -0.54 -0.58 6.08 -5.44 -0.03 -0.61 16 27 H 0.38 -0.77 8.70 45.56 0.40 -0.37 16 28 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 29 H -0.25 -0.47 7.11 56.52 0.40 -0.06 16 30 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 31 H 0.14 -0.02 6.24 -52.49 -0.33 -0.35 16 32 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 33 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 34 H 0.12 -0.49 8.14 -51.93 -0.42 -0.92 16 35 H 0.40 -2.00 8.70 -40.82 -0.36 -2.35 16 36 H 0.10 -0.30 6.32 -51.93 -0.33 -0.63 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.15 -0.63 6.66 -52.49 -0.35 -0.98 16 39 H 0.14 -0.43 8.06 -52.48 -0.42 -0.85 16 40 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 41 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 42 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 43 H 0.41 -0.20 8.96 -40.82 -0.37 -0.57 16 LS Contribution 371.77 15.07 5.60 5.60 Total: 0.00 -9.13 371.77 -10.50 -19.63 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -5.08 Total: -12.44 kcal Atomic # 6 Polarization: 0.79 SS G_CDS: -5.22 Total: -4.43 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -0.31 Total: 0.88 kcal Atomic # 8 Polarization: -3.03 SS G_CDS: -0.37 Total: -3.40 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.08 Total: -0.26 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.20 Total: -5.58 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -9.13 -10.50 -19.63 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.790 kcal (2) G-P(sol) polarization free energy of solvation -9.133 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.631 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds