Wall clock time and date at job start Sun Mar 7 2021 00:08:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.46687 * 2 1 4 4 C 1.50707 * 109.46732 * 119.99117 * 2 1 3 5 5 C 1.31111 * 118.54806 * 250.00585 * 4 2 1 6 6 N 1.38925 * 121.84663 * 179.59906 * 5 4 2 7 7 C 1.47026 * 118.88519 * 13.29423 * 6 5 4 8 8 C 1.50705 * 109.87233 * 196.76824 * 7 6 5 9 9 O 1.21277 * 119.99844 * 18.23780 * 8 7 6 10 10 N 1.34779 * 119.99707 * 198.23512 * 8 7 6 11 11 C 1.46496 * 119.99639 * 179.97438 * 10 8 7 12 12 H 1.08999 * 112.85085 * 23.80737 * 11 10 8 13 13 C 1.53781 * 113.61419 * 155.00234 * 11 10 8 14 14 C 1.53773 * 87.08400 * 89.11576 * 13 11 10 15 15 H 1.08996 * 113.61590 * 270.80508 * 14 13 11 16 16 C 1.50697 * 113.61647 * 139.98280 * 14 13 11 17 17 C 1.38186 * 119.98624 * 299.99620 * 16 14 13 18 18 C 1.38233 * 120.05148 * 179.97438 * 17 16 14 19 19 C 1.38455 * 120.02327 * 359.97438 * 18 17 16 20 20 F 1.35101 * 120.01207 * 179.97438 * 19 18 17 21 21 C 1.38440 * 119.97626 * 359.97438 * 19 18 17 22 22 C 1.38403 * 119.94435 * 359.76790 * 21 19 18 23 23 F 1.35110 * 120.00904 * 180.22862 * 22 21 19 24 24 C 1.53779 * 113.61479 * 252.49737 * 11 10 8 25 25 C 1.53546 * 107.65374 * 316.33449 * 7 6 5 26 26 C 1.50202 * 118.54493 * 69.96740 * 4 2 1 27 27 H 0.96702 * 113.99281 * 60.01102 * 1 2 3 28 28 H 1.08992 * 109.47649 * 239.99593 * 2 1 3 29 29 H 1.48500 * 110.00048 * 298.67391 * 3 2 1 30 30 H 1.48492 * 110.00411 * 59.99587 * 3 2 1 31 31 H 1.08004 * 119.07364 * 359.57100 * 5 4 2 32 32 H 0.96999 * 120.55390 * 193.27021 * 6 5 4 33 33 H 1.09001 * 109.82458 * 75.87417 * 7 6 5 34 34 H 0.96993 * 120.00266 * 0.02562 * 10 8 7 35 35 H 1.08998 * 113.61749 * 203.66793 * 13 11 10 36 36 H 1.08996 * 113.61378 * 334.47801 * 13 11 10 37 37 H 1.08000 * 119.97888 * 359.97438 * 17 16 14 38 38 H 1.08001 * 119.98673 * 179.97438 * 18 17 16 39 39 H 1.07999 * 120.02522 * 180.02562 * 21 19 18 40 40 H 1.08998 * 113.61402 * 25.43644 * 24 11 10 41 41 H 1.09002 * 113.61516 * 156.33684 * 24 11 10 42 42 H 1.09006 * 109.61557 * 180.67505 * 25 7 6 43 43 H 1.09004 * 109.62390 * 301.22451 * 25 7 6 44 44 H 1.08997 * 109.31505 * 79.79734 * 26 4 2 45 45 H 1.09004 * 109.33923 * 320.32250 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2307 5 6 2.5114 -0.0026 2.1696 6 7 2.9920 -0.5855 3.3355 7 6 3.1170 -2.0490 3.3986 8 6 3.2515 -2.4904 4.8333 9 8 2.9207 -1.7446 5.7306 10 7 3.7392 -3.7139 5.1190 11 6 3.8704 -4.1426 6.5137 12 1 3.1963 -3.6109 7.1852 13 6 3.8417 -5.6696 6.6940 14 6 5.3673 -5.6420 6.5032 15 1 5.6790 -5.7343 5.4629 16 6 6.1076 -6.5802 7.4213 17 6 6.0024 -6.4321 8.7911 18 6 6.6805 -7.2922 9.6345 19 6 7.4654 -8.3037 9.1073 20 9 8.1283 -9.1439 9.9318 21 6 7.5706 -8.4537 7.7351 22 6 6.8870 -7.5952 6.8918 23 9 6.9851 -7.7433 5.5525 24 6 5.3254 -4.1904 7.0092 25 6 1.8449 -2.6519 2.7854 26 6 1.7443 -2.1975 1.3276 27 1 -0.3932 0.4416 -0.7652 28 1 1.7924 -0.5138 -0.8899 29 1 1.5879 2.4586 -1.2243 30 1 1.5613 2.4680 1.2083 31 1 2.6189 1.0633 2.0327 32 1 3.2413 -0.0360 4.0950 33 1 3.9896 -2.3704 2.8298 34 1 4.0041 -4.3102 4.4013 35 1 3.5318 -5.9859 7.6900 36 1 3.3103 -6.1931 5.8993 37 1 5.3901 -5.6436 9.2032 38 1 6.5979 -7.1752 10.7049 39 1 8.1823 -9.2426 7.3231 40 1 5.9931 -3.5199 6.4682 41 1 5.4212 -4.1023 8.0914 42 1 1.8988 -3.7398 2.8268 43 1 0.9720 -2.3046 3.3382 44 1 2.5147 -2.6967 0.7400 45 1 0.7638 -2.4645 0.9333 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:11 Heat of formation + Delta-G solvation = -78.654157 kcal Electronic energy + Delta-G solvation = -30085.137870 eV Core-core repulsion = 25513.210977 eV Total energy + Delta-G solvation = -4571.926893 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.143 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.08291 -50.02535 -41.84876 -40.82556 -39.56530 -38.67732 -37.41263 -34.79632 -33.29265 -33.03282 -31.97997 -31.48836 -27.78050 -26.95835 -26.19199 -25.33735 -24.40288 -23.69388 -22.95633 -21.97143 -20.46268 -19.45152 -19.15488 -19.05682 -18.30735 -18.28163 -17.75518 -17.26250 -17.07518 -17.04734 -16.73299 -16.42183 -16.34594 -15.95159 -15.60043 -15.51704 -15.34998 -15.23201 -15.05362 -14.66418 -14.39887 -14.35737 -13.99352 -13.89399 -13.77323 -13.67154 -13.58526 -13.30941 -13.09850 -12.92591 -12.68092 -12.48045 -12.23227 -11.90213 -11.67505 -11.63084 -11.49457 -11.27371 -10.84615 -10.27250 -10.23939 -10.17934 -9.68160 -8.44094 -4.90787 -0.21139 -0.13558 1.32396 1.39156 1.45678 1.63452 1.77281 2.02349 2.17215 2.58350 2.75216 3.14244 3.32005 3.34869 3.39978 3.48879 3.51011 3.56060 3.67653 3.71726 3.76793 3.89572 3.96968 3.97666 4.03396 4.20367 4.38227 4.41728 4.48630 4.50393 4.58238 4.63050 4.63984 4.68465 4.73413 4.74362 4.79529 4.81560 4.90482 4.93537 5.02895 5.11280 5.17748 5.30144 5.39933 5.57982 5.62453 6.19614 6.36540 6.61324 6.82790 7.02380 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.050 4.050 3 Si 0.663 3.337 4 C -0.232 4.232 5 C 0.142 3.858 6 N -0.731 5.731 7 C 0.136 3.864 8 C 0.516 3.484 9 O -0.527 6.527 10 N -0.709 5.709 11 C 0.120 3.880 12 H 0.108 0.892 13 C -0.135 4.135 14 C -0.075 4.075 15 H 0.104 0.896 16 C -0.115 4.115 17 C -0.060 4.060 18 C -0.159 4.159 19 C 0.128 3.872 20 F -0.130 7.130 21 C -0.190 4.190 22 C 0.134 3.866 23 F -0.129 7.129 24 C -0.142 4.142 25 C -0.126 4.126 26 C -0.055 4.055 27 H 0.374 0.626 28 H 0.066 0.934 29 H -0.265 1.265 30 H -0.259 1.259 31 H 0.135 0.865 32 H 0.410 0.590 33 H 0.093 0.907 34 H 0.404 0.596 35 H 0.101 0.899 36 H 0.080 0.920 37 H 0.145 0.855 38 H 0.145 0.855 39 H 0.149 0.851 40 H 0.078 0.922 41 H 0.098 0.902 42 H 0.079 0.921 43 H 0.076 0.924 44 H 0.068 0.932 45 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.518 -1.629 -1.471 3.341 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.161 4.161 3 Si 0.566 3.434 4 C -0.242 4.242 5 C 0.021 3.979 6 N -0.364 5.364 7 C 0.027 3.973 8 C 0.302 3.698 9 O -0.402 6.402 10 N -0.361 5.361 11 C 0.015 3.985 12 H 0.126 0.874 13 C -0.173 4.173 14 C -0.093 4.093 15 H 0.122 0.878 16 C -0.116 4.116 17 C -0.078 4.078 18 C -0.178 4.178 19 C 0.108 3.892 20 F -0.108 7.108 21 C -0.209 4.209 22 C 0.114 3.886 23 F -0.107 7.107 24 C -0.180 4.180 25 C -0.165 4.165 26 C -0.092 4.092 27 H 0.221 0.779 28 H 0.084 0.916 29 H -0.190 1.190 30 H -0.184 1.184 31 H 0.151 0.849 32 H 0.247 0.753 33 H 0.111 0.889 34 H 0.239 0.761 35 H 0.119 0.881 36 H 0.099 0.901 37 H 0.163 0.837 38 H 0.163 0.837 39 H 0.167 0.833 40 H 0.097 0.903 41 H 0.116 0.884 42 H 0.097 0.903 43 H 0.095 0.905 44 H 0.086 0.914 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.202 -0.719 -0.298 2.336 hybrid contribution -0.619 -0.536 -0.711 1.084 sum 1.583 -1.255 -1.009 2.258 Atomic orbital electron populations 1.86612 1.18884 1.79874 1.49348 1.24495 0.83663 1.09255 0.98641 0.95492 0.92263 0.75858 0.79793 1.19884 1.09709 0.96006 0.98564 1.20400 0.94446 0.96620 0.86412 1.44234 1.72780 1.04035 1.15357 1.21007 1.00175 0.83609 0.92545 1.20633 0.76372 0.81658 0.91143 1.90742 1.48273 1.53028 1.48172 1.45608 1.65595 1.16774 1.08144 1.21845 0.97782 0.95589 0.83331 0.87358 1.23446 0.94663 0.95164 1.03983 1.21557 0.94997 0.93909 0.98846 0.87763 1.19790 0.99852 0.97024 0.94977 1.20774 0.97523 0.98187 0.91323 1.21263 0.98986 0.95683 1.01864 1.17344 0.94373 0.90331 0.87129 1.91562 1.78466 1.69364 1.71436 1.21088 1.04571 1.03081 0.92203 1.17139 0.98057 0.96033 0.77358 1.91532 1.94633 1.95019 1.29505 1.23580 0.97117 0.95114 1.02231 1.21863 0.96680 1.00380 0.97585 1.19978 1.02482 0.92044 0.94671 0.77931 0.91648 1.19032 1.18448 0.84864 0.75309 0.88906 0.76105 0.88076 0.90105 0.83700 0.83745 0.83286 0.90344 0.88407 0.90255 0.90522 0.91391 0.90399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.10 12.86 -35.23 -0.45 -1.55 16 2 C -0.05 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.66 -0.21 29.91 -169.99 -5.08 -5.30 16 4 C -0.23 -0.22 5.40 -101.33 -0.55 -0.76 16 5 C 0.14 0.09 9.62 -16.08 -0.15 -0.06 16 6 N -0.73 -0.29 5.47 -55.34 -0.30 -0.59 16 7 C 0.14 -0.14 3.36 -68.51 -0.23 -0.37 16 8 C 0.52 0.06 7.10 -10.98 -0.08 -0.01 16 9 O -0.53 -2.16 15.67 5.56 0.09 -2.07 16 10 N -0.71 1.81 5.26 -53.02 -0.28 1.53 16 11 C 0.12 -0.28 4.32 -67.12 -0.29 -0.57 16 12 H 0.11 -0.07 7.46 -51.93 -0.39 -0.46 16 13 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 14 C -0.07 0.22 3.78 -90.96 -0.34 -0.13 16 15 H 0.10 -0.30 7.45 -51.93 -0.39 -0.69 16 16 C -0.12 0.18 5.29 -104.55 -0.55 -0.37 16 17 C -0.06 0.15 8.61 -39.60 -0.34 -0.19 16 18 C -0.16 0.24 10.03 -39.50 -0.40 -0.16 16 19 C 0.13 0.02 7.30 -39.43 -0.29 -0.26 16 20 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 21 C -0.19 0.01 10.01 -39.45 -0.39 -0.39 16 22 C 0.13 -0.01 7.24 -39.43 -0.29 -0.30 16 23 F -0.13 -0.09 16.36 2.25 0.04 -0.05 16 24 C -0.14 0.40 7.25 -25.92 -0.19 0.21 16 25 C -0.13 0.10 5.47 -26.43 -0.14 -0.05 16 26 C -0.05 0.00 5.85 -28.11 -0.16 -0.16 16 27 H 0.37 -0.63 8.74 45.56 0.40 -0.24 16 28 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 29 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 30 H -0.26 -0.73 6.89 56.52 0.39 -0.34 16 31 H 0.13 -0.05 4.34 -52.48 -0.23 -0.28 16 32 H 0.41 0.23 8.09 -40.82 -0.33 -0.10 16 33 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 34 H 0.40 -1.99 8.70 -40.82 -0.36 -2.34 16 35 H 0.10 -0.40 7.72 -51.93 -0.40 -0.80 16 36 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.15 -0.66 6.65 -52.49 -0.35 -1.01 16 38 H 0.14 -0.44 8.06 -52.49 -0.42 -0.87 16 39 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.10 -0.35 6.31 -51.93 -0.33 -0.68 16 42 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 44 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 45 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 LS Contribution 374.04 15.07 5.64 5.64 Total: 0.00 -7.96 374.04 -10.60 -18.57 By element: Atomic # 1 Polarization: -7.00 SS G_CDS: -5.79 Total: -12.79 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -4.49 Total: -3.22 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.58 Total: 0.94 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.37 Total: -3.62 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.08 Total: -0.22 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.08 Total: -5.30 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -7.96 -10.60 -18.57 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.088 kcal (2) G-P(sol) polarization free energy of solvation -7.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds