Wall clock time and date at job start Sun Mar 7 2021 00:08:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.46956 * 2 1 4 4 C 1.50702 * 109.46781 * 240.00565 * 2 1 3 5 5 C 1.31115 * 118.55143 * 17.21398 * 4 2 1 6 6 N 1.38919 * 121.84831 * 180.38622 * 5 4 2 7 7 C 1.47019 * 118.88802 * 346.70841 * 6 5 4 8 8 C 1.53552 * 107.66632 * 43.64538 * 7 6 5 9 9 C 1.50202 * 118.54549 * 197.20082 * 4 2 1 10 10 C 1.50708 * 109.33225 * 39.85428 * 9 4 2 11 11 O 1.21283 * 119.99778 * 83.09680 * 10 9 4 12 12 N 1.34773 * 120.00036 * 263.10173 * 10 9 4 13 13 C 1.46498 * 119.99838 * 175.38088 * 12 10 9 14 14 H 1.08999 * 112.85004 * 334.66675 * 13 12 10 15 15 C 1.53779 * 113.61643 * 105.86664 * 13 12 10 16 16 C 1.54046 * 86.98917 * 89.15799 * 15 13 12 17 17 H 1.08997 * 113.61737 * 270.89287 * 16 15 13 18 18 C 1.50703 * 113.69737 * 139.98730 * 16 15 13 19 19 C 1.38179 * 119.98584 * 322.47546 * 18 16 15 20 20 C 1.38230 * 120.04837 * 179.97438 * 19 18 16 21 21 C 1.38449 * 120.02714 * 0.02562 * 20 19 18 22 22 F 1.35099 * 120.01435 * 179.97438 * 21 20 19 23 23 C 1.38441 * 119.97318 * 359.97438 * 21 20 19 24 24 C 1.38396 * 119.94635 * 359.72760 * 23 21 20 25 25 F 1.35102 * 120.01204 * 180.27211 * 24 23 21 26 26 C 1.53784 * 87.07713 * 25.43321 * 16 15 13 27 27 H 0.96702 * 114.00068 * 185.84897 * 1 2 3 28 28 H 1.08992 * 109.47032 * 120.00235 * 2 1 3 29 29 H 1.48500 * 110.00062 * 58.68347 * 3 2 1 30 30 H 1.48497 * 109.99955 * 180.02562 * 3 2 1 31 31 H 1.08005 * 119.07331 * 0.40762 * 5 4 2 32 32 H 0.97003 * 120.55268 * 166.69186 * 6 5 4 33 33 H 1.09000 * 109.82822 * 163.20243 * 7 6 5 34 34 H 1.09003 * 109.82255 * 284.12690 * 7 6 5 35 35 H 1.08994 * 109.61622 * 179.34070 * 8 7 6 36 36 H 1.09005 * 109.63557 * 58.77761 * 8 7 6 37 37 H 1.09006 * 109.32995 * 280.20769 * 9 4 2 38 38 H 0.96996 * 120.00118 * 355.38473 * 12 10 9 39 39 H 1.09000 * 113.61705 * 203.66447 * 15 13 12 40 40 H 1.09002 * 113.61220 * 334.56687 * 15 13 12 41 41 H 1.08002 * 119.98112 * 359.96843 * 19 18 16 42 42 H 1.08011 * 119.98698 * 180.02562 * 20 19 18 43 43 H 1.07999 * 120.02412 * 179.97438 * 23 21 20 44 44 H 1.09001 * 113.61927 * 220.02110 * 26 16 15 45 45 H 1.08999 * 113.69269 * 89.12745 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.1029 -0.8938 -2.2302 6 7 1.4909 -1.5467 -3.3934 7 6 2.9225 -1.7813 -3.6324 8 6 3.5412 -2.2686 -2.3142 9 6 3.3589 -1.1765 -1.2578 10 6 3.7292 -1.7289 0.0947 11 8 3.4468 -2.8732 0.3804 12 7 4.3741 -0.9511 0.9866 13 6 4.6443 -1.4535 2.3360 14 1 3.9410 -2.2251 2.6491 15 6 6.1168 -1.8305 2.5696 16 6 6.3358 -0.3711 3.0113 17 1 6.5971 0.2986 2.1920 18 6 7.2529 -0.2288 4.1987 19 6 7.2066 -1.1561 5.2221 20 6 8.0476 -1.0272 6.3115 21 6 8.9370 0.0317 6.3787 22 9 9.7585 0.1577 7.4438 23 6 8.9843 0.9613 5.3539 24 6 8.1461 0.8278 4.2608 25 9 8.1950 1.7311 3.2574 26 6 4.8429 -0.3410 3.3791 27 1 -0.3933 -0.8788 0.0900 28 1 1.7923 -0.5138 0.8899 29 1 1.5354 2.4770 1.1921 30 1 3.5349 1.7702 -0.0006 31 1 0.0906 -0.5267 -2.1471 32 1 0.8284 -1.8429 -4.0370 33 1 3.0489 -2.5414 -4.4034 34 1 3.4020 -0.8536 -3.9447 35 1 4.6037 -2.4641 -2.4590 36 1 3.0395 -3.1800 -1.9889 37 1 4.0091 -0.3341 -1.4937 38 1 4.6593 -0.0588 0.7352 39 1 6.2601 -2.5554 3.3709 40 1 6.6495 -2.0964 1.6566 41 1 6.5128 -1.9822 5.1709 42 1 8.0108 -1.7528 7.1107 43 1 9.6775 1.7879 5.4057 44 1 4.3479 0.5946 3.1193 45 1 4.6371 -0.6591 4.4012 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:15 Heat of formation + Delta-G solvation = -87.381902 kcal Electronic energy + Delta-G solvation = -31168.460171 eV Core-core repulsion = 26596.154814 eV Total energy + Delta-G solvation = -4572.305356 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.143 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -50.06519 -50.01154 -41.83664 -40.84829 -39.48170 -38.52036 -37.50412 -34.64854 -33.49946 -32.36061 -31.96446 -31.45960 -27.33931 -26.92348 -26.58403 -25.71903 -24.32600 -23.20464 -22.94741 -21.93580 -20.40046 -19.38945 -19.24827 -18.78343 -18.31410 -18.14811 -18.01316 -17.27792 -17.04384 -16.96906 -16.65097 -16.34479 -16.26729 -15.79366 -15.58339 -15.46023 -15.39394 -15.14940 -14.96052 -14.78609 -14.46791 -14.24088 -13.90319 -13.87451 -13.77925 -13.63568 -13.56895 -13.17093 -12.89307 -12.66460 -12.52205 -12.29088 -12.19013 -12.06525 -11.85382 -11.62946 -11.44560 -11.16323 -10.97841 -10.66770 -10.20427 -10.10559 -9.66099 -8.32783 -4.83807 -0.19266 -0.11776 1.23270 1.52921 1.62678 1.69133 2.06238 2.18980 2.20689 2.59309 2.76991 3.17654 3.34427 3.37987 3.47172 3.52044 3.53669 3.69350 3.72141 3.78569 3.84771 3.92608 4.00134 4.05721 4.10491 4.25058 4.38970 4.45166 4.46118 4.49936 4.51791 4.61505 4.65715 4.69110 4.72569 4.72694 4.76869 4.82110 4.86030 4.95369 4.96835 5.15017 5.21979 5.27248 5.45546 5.50277 5.64248 6.37096 6.42187 6.60662 6.84602 7.21790 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.051 4.051 3 Si 0.739 3.261 4 C -0.294 4.294 5 C 0.166 3.834 6 N -0.751 5.751 7 C 0.121 3.879 8 C -0.124 4.124 9 C -0.041 4.041 10 C 0.528 3.472 11 O -0.530 6.530 12 N -0.720 5.720 13 C 0.120 3.880 14 H 0.106 0.894 15 C -0.140 4.140 16 C -0.075 4.075 17 H 0.103 0.897 18 C -0.115 4.115 19 C -0.060 4.060 20 C -0.159 4.159 21 C 0.128 3.872 22 F -0.130 7.130 23 C -0.190 4.190 24 C 0.133 3.867 25 F -0.129 7.129 26 C -0.137 4.137 27 H 0.365 0.635 28 H 0.063 0.937 29 H -0.259 1.259 30 H -0.254 1.254 31 H 0.146 0.854 32 H 0.403 0.597 33 H 0.081 0.919 34 H 0.062 0.938 35 H 0.076 0.924 36 H 0.085 0.915 37 H 0.085 0.915 38 H 0.400 0.600 39 H 0.097 0.903 40 H 0.078 0.922 41 H 0.145 0.855 42 H 0.145 0.855 43 H 0.149 0.851 44 H 0.076 0.924 45 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.000 0.437 -3.443 3.612 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.161 4.161 3 Si 0.638 3.362 4 C -0.305 4.305 5 C 0.044 3.956 6 N -0.381 5.381 7 C -0.004 4.004 8 C -0.163 4.163 9 C -0.062 4.062 10 C 0.315 3.685 11 O -0.405 6.405 12 N -0.373 5.373 13 C 0.014 3.986 14 H 0.124 0.876 15 C -0.179 4.179 16 C -0.094 4.094 17 H 0.121 0.879 18 C -0.116 4.116 19 C -0.078 4.078 20 C -0.178 4.178 21 C 0.108 3.892 22 F -0.108 7.108 23 C -0.209 4.209 24 C 0.114 3.886 25 F -0.107 7.107 26 C -0.175 4.175 27 H 0.213 0.787 28 H 0.080 0.920 29 H -0.183 1.183 30 H -0.179 1.179 31 H 0.163 0.837 32 H 0.237 0.763 33 H 0.100 0.900 34 H 0.080 0.920 35 H 0.095 0.905 36 H 0.103 0.897 37 H 0.103 0.897 38 H 0.235 0.765 39 H 0.115 0.885 40 H 0.096 0.904 41 H 0.163 0.837 42 H 0.163 0.837 43 H 0.167 0.833 44 H 0.095 0.905 45 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -0.485 0.882 -2.891 3.061 hybrid contribution 0.331 -0.934 0.486 1.104 sum -0.153 -0.053 -2.406 2.411 Atomic orbital electron populations 1.86688 1.17766 1.34022 1.96399 1.25052 0.83912 1.11621 0.95500 0.92653 0.78470 0.77534 0.87533 1.20249 0.95815 1.15705 0.98735 1.20383 0.98621 0.91368 0.85224 1.44605 1.06908 1.64280 1.22282 1.21579 0.81620 1.00529 0.96656 1.21795 1.01750 0.98442 0.94335 1.19665 0.95701 0.98657 0.92219 1.20644 0.76060 0.85665 0.86166 1.90702 1.53412 1.17736 1.78688 1.45981 1.59816 1.18988 1.12476 1.21822 0.97293 0.97305 0.82152 0.87573 1.23604 0.96510 0.95224 1.02551 1.21599 0.93515 0.99044 0.95217 0.87904 1.19793 0.98288 0.95272 0.98208 1.20770 0.97643 0.97994 0.91369 1.21258 0.97099 0.98684 1.00733 1.17334 0.91292 0.95803 0.84766 1.91560 1.70137 1.95617 1.53508 1.21080 1.03339 1.02424 0.94067 1.17146 0.96951 0.88615 0.85924 1.91530 1.95431 1.65385 1.58364 1.23457 0.94532 0.99485 0.99990 0.78706 0.91977 1.18325 1.17884 0.83664 0.76320 0.90013 0.91961 0.90544 0.89662 0.89740 0.76460 0.88465 0.90353 0.83698 0.83727 0.83274 0.90484 0.87978 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.22 11.07 -35.23 -0.39 -0.61 16 2 C -0.05 -0.02 2.47 36.01 0.09 0.07 16 3 Si 0.74 -0.17 32.85 -169.99 -5.58 -5.76 16 4 C -0.29 -0.02 4.12 -101.34 -0.42 -0.43 16 5 C 0.17 -0.14 10.23 -16.08 -0.16 -0.30 16 6 N -0.75 1.36 5.83 -60.68 -0.35 1.01 16 7 C 0.12 -0.25 7.16 -3.47 -0.02 -0.27 16 8 C -0.12 0.03 5.32 -26.43 -0.14 -0.11 16 9 C -0.04 -0.01 2.31 -93.14 -0.22 -0.22 16 10 C 0.53 1.01 5.21 -10.98 -0.06 0.95 16 11 O -0.53 -2.99 15.77 5.56 0.09 -2.90 16 12 N -0.72 0.07 5.09 -53.01 -0.27 -0.20 16 13 C 0.12 -0.07 4.26 -67.12 -0.29 -0.36 16 14 H 0.11 0.08 7.56 -51.93 -0.39 -0.31 16 15 C -0.14 0.18 7.27 -25.78 -0.19 -0.01 16 16 C -0.08 0.09 3.79 -90.82 -0.34 -0.25 16 17 H 0.10 -0.09 7.44 -51.93 -0.39 -0.48 16 18 C -0.11 0.05 5.30 -104.55 -0.55 -0.51 16 19 C -0.06 0.09 8.61 -39.61 -0.34 -0.25 16 20 C -0.16 0.13 10.02 -39.51 -0.40 -0.27 16 21 C 0.13 0.11 7.30 -39.43 -0.29 -0.18 16 22 F -0.13 -0.27 17.27 2.25 0.04 -0.23 16 23 C -0.19 -0.14 10.01 -39.45 -0.39 -0.53 16 24 C 0.13 0.12 7.24 -39.43 -0.29 -0.16 16 25 F -0.13 -0.24 16.36 2.25 0.04 -0.20 16 26 C -0.14 0.24 7.28 -25.91 -0.19 0.05 16 27 H 0.37 -0.68 9.06 45.56 0.41 -0.26 16 28 H 0.06 0.10 6.50 -51.93 -0.34 -0.24 16 29 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 30 H -0.25 0.08 6.63 56.52 0.37 0.46 16 31 H 0.15 -0.27 6.82 -52.48 -0.36 -0.63 16 32 H 0.40 -1.39 8.96 -40.82 -0.37 -1.76 16 33 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.06 -0.15 8.14 -51.93 -0.42 -0.58 16 35 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.08 0.19 7.50 -51.93 -0.39 -0.20 16 37 H 0.08 -0.11 7.94 -51.93 -0.41 -0.52 16 38 H 0.40 -0.55 8.01 -40.82 -0.33 -0.87 16 39 H 0.10 -0.23 6.33 -51.93 -0.33 -0.55 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.15 -0.53 6.66 -52.49 -0.35 -0.88 16 42 H 0.14 -0.36 8.06 -52.48 -0.42 -0.78 16 43 H 0.15 -0.05 8.06 -52.49 -0.42 -0.48 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 45 H 0.10 -0.27 7.73 -51.93 -0.40 -0.67 16 LS Contribution 373.24 15.07 5.62 5.62 Total: 0.00 -6.51 373.24 -10.83 -17.34 By element: Atomic # 1 Polarization: -5.46 SS G_CDS: -5.82 Total: -11.28 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -4.20 Total: -2.79 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -0.62 Total: 0.81 kcal Atomic # 8 Polarization: -3.21 SS G_CDS: -0.30 Total: -3.51 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.08 Total: -0.43 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.58 Total: -5.76 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -6.51 -10.83 -17.34 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.042 kcal (2) G-P(sol) polarization free energy of solvation -6.512 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.555 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds