Wall clock time and date at job start Sun Mar 7 2021 00:08:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.46956 * 2 1 4 4 C 1.50702 * 109.46781 * 240.00565 * 2 1 3 5 5 C 1.31115 * 118.55143 * 17.21398 * 4 2 1 6 6 N 1.38919 * 121.84831 * 180.38622 * 5 4 2 7 7 C 1.47019 * 118.88802 * 346.70841 * 6 5 4 8 8 C 1.53552 * 107.66632 * 43.64538 * 7 6 5 9 9 C 1.50202 * 118.54549 * 197.20082 * 4 2 1 10 10 C 1.50708 * 109.33225 * 39.85428 * 9 4 2 11 11 O 1.21283 * 119.99778 * 83.09680 * 10 9 4 12 12 N 1.34773 * 120.00036 * 263.10173 * 10 9 4 13 13 C 1.46498 * 119.99838 * 175.38088 * 12 10 9 14 14 H 1.08999 * 112.85004 * 334.66675 * 13 12 10 15 15 C 1.53779 * 113.61643 * 105.86664 * 13 12 10 16 16 C 1.54046 * 86.98917 * 89.15799 * 15 13 12 17 17 H 1.08997 * 113.61737 * 270.89287 * 16 15 13 18 18 C 1.50703 * 113.69737 * 139.98730 * 16 15 13 19 19 C 1.38179 * 119.98584 * 322.47546 * 18 16 15 20 20 C 1.38230 * 120.04837 * 179.97438 * 19 18 16 21 21 C 1.38449 * 120.02714 * 0.02562 * 20 19 18 22 22 F 1.35099 * 120.01435 * 179.97438 * 21 20 19 23 23 C 1.38441 * 119.97318 * 359.97438 * 21 20 19 24 24 C 1.38396 * 119.94635 * 359.72760 * 23 21 20 25 25 F 1.35102 * 120.01204 * 180.27211 * 24 23 21 26 26 C 1.53784 * 87.07713 * 25.43321 * 16 15 13 27 27 H 0.96702 * 114.00068 * 185.84897 * 1 2 3 28 28 H 1.08992 * 109.47032 * 120.00235 * 2 1 3 29 29 H 1.48500 * 110.00062 * 58.68347 * 3 2 1 30 30 H 1.48497 * 109.99955 * 180.02562 * 3 2 1 31 31 H 1.08005 * 119.07331 * 0.40762 * 5 4 2 32 32 H 0.97003 * 120.55268 * 166.69186 * 6 5 4 33 33 H 1.09000 * 109.82822 * 163.20243 * 7 6 5 34 34 H 1.09003 * 109.82255 * 284.12690 * 7 6 5 35 35 H 1.08994 * 109.61622 * 179.34070 * 8 7 6 36 36 H 1.09005 * 109.63557 * 58.77761 * 8 7 6 37 37 H 1.09006 * 109.32995 * 280.20769 * 9 4 2 38 38 H 0.96996 * 120.00118 * 355.38473 * 12 10 9 39 39 H 1.09000 * 113.61705 * 203.66447 * 15 13 12 40 40 H 1.09002 * 113.61220 * 334.56687 * 15 13 12 41 41 H 1.08002 * 119.98112 * 359.96843 * 19 18 16 42 42 H 1.08011 * 119.98698 * 180.02562 * 20 19 18 43 43 H 1.07999 * 120.02412 * 179.97438 * 23 21 20 44 44 H 1.09001 * 113.61927 * 220.02110 * 26 16 15 45 45 H 1.08999 * 113.69269 * 89.12745 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.1029 -0.8938 -2.2302 6 7 1.4909 -1.5467 -3.3934 7 6 2.9225 -1.7813 -3.6324 8 6 3.5412 -2.2686 -2.3142 9 6 3.3589 -1.1765 -1.2578 10 6 3.7292 -1.7289 0.0947 11 8 3.4468 -2.8732 0.3804 12 7 4.3741 -0.9511 0.9866 13 6 4.6443 -1.4535 2.3360 14 1 3.9410 -2.2251 2.6491 15 6 6.1168 -1.8305 2.5696 16 6 6.3358 -0.3711 3.0113 17 1 6.5971 0.2986 2.1920 18 6 7.2529 -0.2288 4.1987 19 6 7.2066 -1.1561 5.2221 20 6 8.0476 -1.0272 6.3115 21 6 8.9370 0.0317 6.3787 22 9 9.7585 0.1577 7.4438 23 6 8.9843 0.9613 5.3539 24 6 8.1461 0.8278 4.2608 25 9 8.1950 1.7311 3.2574 26 6 4.8429 -0.3410 3.3791 27 1 -0.3933 -0.8788 0.0900 28 1 1.7923 -0.5138 0.8899 29 1 1.5354 2.4770 1.1921 30 1 3.5349 1.7702 -0.0006 31 1 0.0906 -0.5267 -2.1471 32 1 0.8284 -1.8429 -4.0370 33 1 3.0489 -2.5414 -4.4034 34 1 3.4020 -0.8536 -3.9447 35 1 4.6037 -2.4641 -2.4590 36 1 3.0395 -3.1800 -1.9889 37 1 4.0091 -0.3341 -1.4937 38 1 4.6593 -0.0588 0.7352 39 1 6.2601 -2.5554 3.3709 40 1 6.6495 -2.0964 1.6566 41 1 6.5128 -1.9822 5.1709 42 1 8.0108 -1.7528 7.1107 43 1 9.6775 1.7879 5.4057 44 1 4.3479 0.5946 3.1193 45 1 4.6371 -0.6591 4.4012 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:14 Heat of formation + Delta-G solvation = -83.336213 kcal Electronic energy + Delta-G solvation = -31168.284737 eV Core-core repulsion = 26596.154814 eV Total energy + Delta-G solvation = -4572.129922 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.143 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -50.13421 -50.08697 -41.85878 -40.82167 -39.46093 -38.56212 -37.48316 -34.74243 -33.45152 -32.29496 -31.92881 -31.43966 -27.30984 -26.83027 -26.55212 -25.67560 -24.29547 -23.14925 -22.92493 -21.99070 -20.38162 -19.40892 -19.20953 -18.74148 -18.30910 -18.18240 -18.00168 -17.25833 -17.10234 -16.95021 -16.67700 -16.42599 -16.28776 -15.82913 -15.60135 -15.47682 -15.35394 -15.13730 -14.95632 -14.77568 -14.41145 -14.16781 -13.90391 -13.82882 -13.78397 -13.61725 -13.51514 -13.15196 -12.89179 -12.62269 -12.47717 -12.30814 -12.17102 -12.06302 -11.82159 -11.59673 -11.40025 -11.20382 -10.92721 -10.76726 -10.21051 -10.12784 -9.65705 -8.24035 -4.84182 -0.18310 -0.08622 1.27139 1.48096 1.57207 1.65794 2.04324 2.20847 2.22684 2.74977 2.76926 3.22260 3.38022 3.41842 3.51106 3.56787 3.60462 3.74131 3.78275 3.86613 3.89614 3.99660 4.06215 4.10798 4.17242 4.31453 4.42170 4.47517 4.52036 4.60642 4.64053 4.65458 4.74383 4.78085 4.78963 4.82658 4.85241 4.85908 4.91997 5.01712 5.04283 5.19113 5.24838 5.35823 5.50861 5.54481 5.67181 6.38519 6.47554 6.68802 7.04141 7.13636 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.052 4.052 3 Si 0.788 3.212 4 C -0.311 4.311 5 C 0.172 3.828 6 N -0.749 5.749 7 C 0.122 3.878 8 C -0.123 4.123 9 C -0.042 4.042 10 C 0.528 3.472 11 O -0.574 6.574 12 N -0.713 5.713 13 C 0.114 3.886 14 H 0.093 0.907 15 C -0.134 4.134 16 C -0.072 4.072 17 H 0.098 0.902 18 C -0.113 4.113 19 C -0.055 4.055 20 C -0.153 4.153 21 C 0.109 3.891 22 F -0.141 7.141 23 C -0.197 4.197 24 C 0.115 3.885 25 F -0.138 7.138 26 C -0.128 4.128 27 H 0.374 0.626 28 H 0.046 0.954 29 H -0.304 1.304 30 H -0.250 1.250 31 H 0.156 0.844 32 H 0.411 0.589 33 H 0.096 0.904 34 H 0.073 0.927 35 H 0.082 0.918 36 H 0.057 0.943 37 H 0.101 0.899 38 H 0.407 0.593 39 H 0.112 0.888 40 H 0.069 0.931 41 H 0.171 0.829 42 H 0.164 0.836 43 H 0.152 0.848 44 H 0.075 0.925 45 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.215 0.236 -4.127 4.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.162 4.162 3 Si 0.690 3.310 4 C -0.322 4.322 5 C 0.049 3.951 6 N -0.379 5.379 7 C -0.003 4.003 8 C -0.162 4.162 9 C -0.063 4.063 10 C 0.316 3.684 11 O -0.452 6.452 12 N -0.365 5.365 13 C 0.008 3.992 14 H 0.111 0.889 15 C -0.172 4.172 16 C -0.090 4.090 17 H 0.117 0.883 18 C -0.114 4.114 19 C -0.073 4.073 20 C -0.172 4.172 21 C 0.090 3.910 22 F -0.120 7.120 23 C -0.216 4.216 24 C 0.095 3.905 25 F -0.117 7.117 26 C -0.166 4.166 27 H 0.223 0.777 28 H 0.064 0.936 29 H -0.232 1.232 30 H -0.174 1.174 31 H 0.173 0.827 32 H 0.247 0.753 33 H 0.115 0.885 34 H 0.091 0.909 35 H 0.101 0.899 36 H 0.076 0.924 37 H 0.119 0.881 38 H 0.244 0.756 39 H 0.130 0.870 40 H 0.088 0.912 41 H 0.189 0.811 42 H 0.181 0.819 43 H 0.170 0.830 44 H 0.093 0.907 45 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -0.685 0.685 -3.602 3.730 hybrid contribution 0.354 -0.892 0.730 1.205 sum -0.331 -0.207 -2.873 2.899 Atomic orbital electron populations 1.86650 1.17839 1.34969 1.96392 1.25085 0.83926 1.11965 0.95186 0.92143 0.77782 0.75644 0.85460 1.20189 0.96029 1.16987 0.98978 1.20545 0.98801 0.90510 0.85225 1.44693 1.07406 1.63685 1.22104 1.21654 0.81322 1.01431 0.95893 1.21758 1.02023 0.97181 0.95190 1.19737 0.96215 0.99153 0.91199 1.20998 0.75411 0.85128 0.86899 1.90675 1.55338 1.19593 1.79614 1.45967 1.58973 1.19040 1.12501 1.21874 0.97507 0.97624 0.82188 0.88921 1.23594 0.95492 0.95475 1.02639 1.21551 0.93605 0.98965 0.94889 0.88338 1.19939 0.97831 0.94962 0.98647 1.21056 0.97569 0.98161 0.90488 1.21523 0.96165 0.98217 1.01297 1.17551 0.92047 0.96732 0.84708 1.91528 1.70634 1.95776 1.54018 1.21164 1.03544 1.02729 0.94211 1.17327 0.97897 0.89221 0.86009 1.91500 1.95589 1.65846 1.58753 1.23450 0.93930 0.98902 1.00289 0.77661 0.93639 1.23195 1.17429 0.82701 0.75290 0.88533 0.90889 0.89912 0.92439 0.88144 0.75640 0.87024 0.91248 0.81147 0.81864 0.83032 0.90651 0.86599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.64 11.07 -148.98 -1.65 -2.29 16 2 C -0.05 -0.07 2.47 71.24 0.18 0.11 16 3 Si 0.79 -0.13 32.85 68.60 2.25 2.12 16 4 C -0.31 -0.04 4.12 -16.76 -0.07 -0.11 16 5 C 0.17 -0.38 10.23 83.41 0.85 0.47 16 6 N -0.75 3.38 5.83 -345.90 -2.02 1.37 16 7 C 0.12 -0.62 7.16 86.47 0.62 0.00 16 8 C -0.12 0.03 5.32 30.79 0.16 0.20 16 9 C -0.04 -0.02 2.31 -12.43 -0.03 -0.05 16 10 C 0.53 2.50 5.21 87.66 0.46 2.96 16 11 O -0.57 -7.41 15.77 -3.04 -0.05 -7.46 16 12 N -0.71 -0.27 5.09 -440.03 -2.24 -2.51 16 13 C 0.11 -0.09 4.26 45.52 0.19 0.10 16 14 H 0.09 0.22 7.56 -2.39 -0.02 0.20 16 15 C -0.13 0.38 7.27 31.21 0.23 0.61 16 16 C -0.07 0.20 3.79 -10.92 -0.04 0.16 16 17 H 0.10 -0.17 7.44 -2.39 -0.02 -0.18 16 18 C -0.11 0.13 5.30 -19.82 -0.10 0.03 16 19 C -0.06 0.24 8.61 22.25 0.19 0.43 16 20 C -0.15 0.38 10.02 22.32 0.22 0.60 16 21 C 0.11 0.21 7.30 22.37 0.16 0.38 16 22 F -0.14 -0.68 17.27 44.97 0.78 0.10 16 23 C -0.20 -0.45 10.01 22.36 0.22 -0.22 16 24 C 0.11 0.27 7.24 22.37 0.16 0.43 16 25 F -0.14 -0.63 16.36 44.97 0.74 0.10 16 26 C -0.13 0.49 7.28 31.12 0.23 0.72 16 27 H 0.37 -1.22 9.06 -74.06 -0.67 -1.89 16 28 H 0.05 0.20 6.50 -2.39 -0.02 0.18 16 29 H -0.30 -2.26 7.11 99.48 0.71 -1.56 16 30 H -0.25 0.30 6.63 99.48 0.66 0.96 16 31 H 0.16 -0.70 6.82 -2.91 -0.02 -0.72 16 32 H 0.41 -3.29 8.96 -92.71 -0.83 -4.12 16 33 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 34 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 35 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.06 0.33 7.50 -2.38 -0.02 0.31 16 37 H 0.10 -0.33 7.94 -2.38 -0.02 -0.35 16 38 H 0.41 -1.05 8.01 -92.71 -0.74 -1.80 16 39 H 0.11 -0.65 6.33 -2.39 -0.02 -0.67 16 40 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.17 -1.65 6.66 -2.91 -0.02 -1.67 16 42 H 0.16 -1.06 8.06 -2.90 -0.02 -1.09 16 43 H 0.15 0.10 8.06 -2.91 -0.02 0.08 16 44 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 45 H 0.12 -0.74 7.73 -2.39 -0.02 -0.76 16 Total: 0.00 -16.86 373.24 0.26 -16.60 By element: Atomic # 1 Polarization: -13.65 SS G_CDS: -1.18 Total: -14.83 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: 3.64 Total: 6.80 kcal Atomic # 7 Polarization: 3.12 SS G_CDS: -4.26 Total: -1.14 kcal Atomic # 8 Polarization: -8.05 SS G_CDS: -1.70 Total: -9.75 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 1.51 Total: 0.20 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: 2.25 Total: 2.12 kcal Total: -16.86 0.26 -16.60 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.740 kcal (2) G-P(sol) polarization free energy of solvation -16.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds