Wall clock time and date at job start Sun Mar 7 2021 00:08:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.46931 * 2 1 4 4 C 1.50696 * 109.47387 * 119.99685 * 2 1 3 5 5 C 1.38709 * 120.02762 * 75.00248 * 4 2 1 6 6 O 1.35900 * 120.05786 * 359.97438 * 5 4 2 7 7 C 1.42894 * 117.00366 * 179.97438 * 6 5 4 8 8 C 1.50699 * 109.47579 * 180.02562 * 7 6 5 9 9 O 1.21283 * 119.99341 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.84946 * 25.32798 * 11 10 8 13 13 C 1.53777 * 113.61483 * 156.52827 * 11 10 8 14 14 C 1.53780 * 87.08462 * 89.11378 * 13 11 10 15 15 H 1.09001 * 113.60857 * 270.88662 * 14 13 11 16 16 C 1.50690 * 113.61621 * 140.06639 * 14 13 11 17 17 C 1.38456 * 119.99069 * 119.72138 * 16 14 13 18 18 F 1.35101 * 120.00710 * 0.02958 * 17 16 14 19 19 C 1.38440 * 119.98018 * 179.76422 * 17 16 14 20 20 C 1.38398 * 119.94402 * 0.53481 * 19 17 16 21 21 F 1.35100 * 120.01297 * 179.73824 * 20 19 17 22 22 C 1.38497 * 119.97836 * 359.72299 * 20 19 17 23 23 C 1.38189 * 120.02314 * 359.97438 * 22 20 19 24 24 C 1.53783 * 113.61205 * 254.13500 * 11 10 8 25 25 C 1.38759 * 119.88974 * 179.97438 * 5 4 2 26 26 C 1.38120 * 119.94381 * 0.02562 * 25 5 4 27 27 C 1.38285 * 120.05710 * 0.02562 * 26 25 5 28 28 C 1.38171 * 120.03158 * 255.00373 * 4 2 1 29 29 H 0.96701 * 114.00227 * 60.00977 * 1 2 3 30 30 H 1.08995 * 109.47667 * 239.99939 * 2 1 3 31 31 H 1.48504 * 109.99618 * 298.67550 * 3 2 1 32 32 H 1.48494 * 109.99943 * 59.99525 * 3 2 1 33 33 H 1.09001 * 109.47530 * 300.00843 * 7 6 5 34 34 H 1.08998 * 109.46987 * 60.00416 * 7 6 5 35 35 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 36 36 H 1.08996 * 113.61500 * 203.66679 * 13 11 10 37 37 H 1.09004 * 113.61165 * 334.47675 * 13 11 10 38 38 H 1.07994 * 120.02803 * 180.25892 * 19 17 16 39 39 H 1.07994 * 119.99205 * 179.97438 * 22 20 19 40 40 H 1.08003 * 119.97638 * 180.02562 * 23 22 20 41 41 H 1.09006 * 113.61506 * 25.42773 * 24 11 10 42 42 H 1.08995 * 113.61619 * 156.33841 * 24 11 10 43 43 H 1.08001 * 120.02961 * 179.97438 * 25 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 26 25 5 45 45 H 1.08000 * 119.95126 * 179.70618 * 27 26 25 46 46 H 1.08005 * 119.97031 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.8698 -2.0939 1.3070 6 8 1.3559 -2.8106 0.2730 7 6 1.3244 -4.2316 0.4208 8 6 0.7270 -4.8522 -0.8156 9 8 0.3644 -4.1471 -1.7334 10 7 0.5956 -6.1908 -0.9017 11 6 0.0154 -6.7941 -2.1039 12 1 0.1337 -6.1702 -2.9899 13 6 0.4326 -8.2582 -2.3213 14 6 -0.7874 -8.6500 -1.4711 15 1 -0.5750 -8.7084 -0.4036 16 6 -1.5205 -9.8604 -1.9891 17 6 -1.6413 -10.9884 -1.1954 18 9 -1.1025 -11.0038 0.0434 19 6 -2.3191 -12.0985 -1.6696 20 6 -2.8657 -12.0833 -2.9410 21 9 -3.5228 -13.1677 -3.4071 22 6 -2.7390 -10.9557 -3.7352 23 6 -2.0677 -9.8460 -3.2584 24 6 -1.4184 -7.3124 -1.9024 25 6 2.3336 -2.7451 2.4411 26 6 2.8549 -2.0144 3.4909 27 6 2.9143 -0.6350 3.4126 28 6 2.4537 0.0160 2.2834 29 1 -0.3934 0.4416 -0.7651 30 1 1.7924 -0.5138 -0.8899 31 1 1.5878 2.4585 -1.2244 32 1 1.5613 2.4679 1.2084 33 1 2.3389 -4.6050 0.5606 34 1 0.7183 -4.4932 1.2882 35 1 0.8860 -6.7548 -0.1678 36 1 0.3636 -8.5823 -3.3596 37 1 1.3873 -8.5130 -1.8610 38 1 -2.4174 -12.9773 -1.0496 39 1 -3.1651 -10.9437 -4.7275 40 1 -1.9697 -8.9670 -3.8782 41 1 -1.9579 -6.8046 -1.1029 42 1 -1.9927 -7.3785 -2.8265 43 1 2.2864 -3.8222 2.5033 44 1 3.2157 -2.5206 4.3740 45 1 3.3178 -0.0651 4.2365 46 1 2.5015 1.0934 2.2245 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:24 Heat of formation + Delta-G solvation = -100.830234 kcal Electronic energy + Delta-G solvation = -32706.767061 eV Core-core repulsion = 27779.707598 eV Total energy + Delta-G solvation = -4927.059463 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -50.09058 -50.02680 -41.81445 -41.30258 -40.21574 -38.94713 -38.20148 -37.45771 -34.71887 -32.85803 -32.05579 -31.74086 -31.15873 -29.37629 -26.95982 -26.57415 -26.24444 -24.44112 -23.70850 -22.93366 -22.45765 -21.83061 -20.45177 -19.40170 -19.30773 -18.47528 -18.37652 -18.18092 -17.58984 -17.37839 -17.06642 -17.03964 -16.89215 -16.82357 -16.59120 -16.35839 -15.76825 -15.57619 -15.54123 -15.48822 -15.26276 -15.18233 -14.90309 -14.63895 -14.16086 -13.93946 -13.80111 -13.76753 -13.71481 -13.61751 -13.50581 -12.99195 -12.91965 -12.68258 -12.66879 -12.23761 -12.16626 -11.90088 -11.74587 -11.66634 -11.49916 -10.93358 -10.27473 -10.27229 -10.18283 -9.95410 -9.68298 -9.18136 -4.90149 -0.21329 -0.13632 0.24763 0.44365 1.37119 1.39194 1.43440 1.65369 2.00566 2.17058 2.51306 2.67892 2.75035 3.13639 3.31772 3.34721 3.39040 3.46930 3.50627 3.51471 3.67255 3.73787 3.76453 3.85245 3.89097 3.89738 3.91974 4.03222 4.12434 4.27421 4.34916 4.41292 4.48851 4.51987 4.57775 4.62913 4.66388 4.68300 4.73418 4.79716 4.82249 4.90296 4.93576 4.98460 5.10999 5.27753 5.37330 5.39252 5.52041 5.62316 5.71491 6.19971 6.35614 6.63569 7.04194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.066 4.066 3 Si 0.685 3.315 4 C -0.100 4.100 5 C 0.151 3.849 6 O -0.279 6.279 7 C 0.039 3.961 8 C 0.520 3.480 9 O -0.508 6.508 10 N -0.712 5.712 11 C 0.123 3.877 12 H 0.109 0.891 13 C -0.133 4.133 14 C -0.075 4.075 15 H 0.104 0.896 16 C -0.115 4.115 17 C 0.133 3.867 18 F -0.129 7.129 19 C -0.190 4.190 20 C 0.128 3.872 21 F -0.130 7.130 22 C -0.159 4.159 23 C -0.060 4.060 24 C -0.143 4.143 25 C -0.212 4.212 26 C -0.073 4.073 27 C -0.151 4.151 28 C -0.078 4.078 29 H 0.378 0.622 30 H 0.076 0.924 31 H -0.261 1.261 32 H -0.255 1.255 33 H 0.095 0.905 34 H 0.094 0.906 35 H 0.403 0.597 36 H 0.102 0.898 37 H 0.080 0.920 38 H 0.149 0.851 39 H 0.145 0.855 40 H 0.146 0.854 41 H 0.078 0.922 42 H 0.098 0.902 43 H 0.130 0.870 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.087 -1.909 0.896 4.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.176 4.176 3 Si 0.586 3.414 4 C -0.101 4.101 5 C 0.105 3.895 6 O -0.191 6.191 7 C -0.040 4.040 8 C 0.305 3.695 9 O -0.381 6.381 10 N -0.366 5.366 11 C 0.018 3.982 12 H 0.127 0.873 13 C -0.171 4.171 14 C -0.094 4.094 15 H 0.122 0.878 16 C -0.116 4.116 17 C 0.114 3.886 18 F -0.107 7.107 19 C -0.209 4.209 20 C 0.108 3.892 21 F -0.108 7.108 22 C -0.178 4.178 23 C -0.078 4.078 24 C -0.181 4.181 25 C -0.231 4.231 26 C -0.091 4.091 27 C -0.169 4.169 28 C -0.096 4.096 29 H 0.225 0.775 30 H 0.095 0.905 31 H -0.186 1.186 32 H -0.180 1.180 33 H 0.113 0.887 34 H 0.112 0.888 35 H 0.238 0.762 36 H 0.120 0.880 37 H 0.099 0.901 38 H 0.167 0.833 39 H 0.163 0.837 40 H 0.163 0.837 41 H 0.097 0.903 42 H 0.117 0.883 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.148 0.852 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.621 -0.813 0.609 3.761 hybrid contribution -1.062 -1.160 0.311 1.603 sum 2.559 -1.973 0.919 3.360 Atomic orbital electron populations 1.86599 1.17673 1.80118 1.49347 1.24636 0.84611 1.10237 0.98073 0.95218 0.91436 0.74704 0.80003 1.18592 1.04425 0.90192 0.96897 1.18773 0.93201 0.90784 0.86773 1.86199 1.77564 1.16725 1.38632 1.22453 1.02567 0.81538 0.97435 1.20026 0.78885 0.82321 0.88283 1.90785 1.47279 1.60952 1.39045 1.45483 1.64566 1.06270 1.20266 1.21829 0.93509 0.94115 0.88780 0.87305 1.23438 0.97975 0.94158 1.01563 1.21609 0.96033 0.91236 1.00473 0.87803 1.19787 1.02036 0.94869 0.94956 1.17137 0.96443 0.94192 0.80840 1.91528 1.83581 1.96746 1.38868 1.21083 1.02831 1.00310 0.96720 1.17344 0.94999 0.84364 0.92461 1.91562 1.78212 1.52591 1.88457 1.21264 1.02605 0.92484 1.01418 1.20779 0.94787 0.98068 0.94151 1.23640 0.96841 0.94587 1.03060 1.21263 1.06557 1.00398 0.94852 1.21016 0.96331 0.94082 0.97657 1.21053 1.02817 0.94576 0.98441 1.20994 0.96514 0.99873 0.92185 0.77488 0.90550 1.18643 1.18024 0.88710 0.88798 0.76214 0.87970 0.90090 0.83292 0.83727 0.83671 0.90310 0.88340 0.85250 0.85311 0.85222 0.84787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -2.15 12.86 -35.23 -0.45 -2.60 16 2 C -0.07 -0.16 2.37 36.00 0.09 -0.08 16 3 Si 0.68 0.29 30.20 -169.99 -5.13 -4.84 16 4 C -0.10 -0.29 5.30 -104.47 -0.55 -0.84 16 5 C 0.15 0.41 6.66 -39.21 -0.26 0.14 16 6 O -0.28 -0.95 9.00 -39.34 -0.35 -1.30 16 7 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 8 C 0.52 0.55 7.91 -10.99 -0.09 0.46 16 9 O -0.51 -2.99 16.12 -14.36 -0.23 -3.22 16 10 N -0.71 1.59 5.26 -53.02 -0.28 1.31 16 11 C 0.12 -0.25 4.29 -67.12 -0.29 -0.54 16 12 H 0.11 -0.04 7.50 -51.93 -0.39 -0.43 16 13 C -0.13 0.47 7.29 -25.92 -0.19 0.28 16 14 C -0.08 0.20 3.79 -90.82 -0.34 -0.14 16 15 H 0.10 -0.28 7.45 -51.93 -0.39 -0.67 16 16 C -0.12 0.16 5.30 -104.55 -0.55 -0.39 16 17 C 0.13 0.01 7.24 -39.43 -0.29 -0.28 16 18 F -0.13 -0.11 16.36 2.25 0.04 -0.07 16 19 C -0.19 -0.02 10.01 -39.45 -0.39 -0.41 16 20 C 0.13 0.04 7.30 -39.43 -0.29 -0.25 16 21 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 22 C -0.16 0.21 10.03 -39.50 -0.40 -0.18 16 23 C -0.06 0.14 8.61 -39.60 -0.34 -0.21 16 24 C -0.14 0.34 7.27 -25.77 -0.19 0.15 16 25 C -0.21 -0.07 9.04 -39.43 -0.36 -0.43 16 26 C -0.07 0.02 10.04 -39.61 -0.40 -0.38 16 27 C -0.15 -0.03 10.04 -39.56 -0.40 -0.43 16 28 C -0.08 -0.10 8.66 -39.60 -0.34 -0.45 16 29 H 0.38 0.10 8.74 45.56 0.40 0.50 16 30 H 0.08 0.18 7.83 -51.93 -0.41 -0.22 16 31 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 32 H -0.26 -0.69 6.75 56.52 0.38 -0.31 16 33 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 34 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 35 H 0.40 -2.05 8.70 -40.82 -0.36 -2.41 16 36 H 0.10 -0.41 7.72 -51.93 -0.40 -0.81 16 37 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 38 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.14 -0.43 8.06 -52.49 -0.42 -0.85 16 40 H 0.15 -0.64 6.66 -52.48 -0.35 -0.99 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.10 -0.31 6.32 -51.93 -0.33 -0.64 16 43 H 0.13 -0.31 6.30 -52.49 -0.33 -0.64 16 44 H 0.13 -0.32 8.06 -52.49 -0.42 -0.75 16 45 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 46 H 0.13 0.00 4.90 -52.48 -0.26 -0.26 16 LS Contribution 393.26 15.07 5.93 5.93 Total: 0.00 -10.22 393.26 -11.20 -21.41 By element: Atomic # 1 Polarization: -7.26 SS G_CDS: -5.36 Total: -12.62 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -5.39 Total: -3.81 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -0.28 Total: 1.31 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -1.04 Total: -7.13 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.08 Total: -0.25 kcal Atomic # 14 Polarization: 0.29 SS G_CDS: -5.13 Total: -4.84 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -10.22 -11.20 -21.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.416 kcal (2) G-P(sol) polarization free energy of solvation -10.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.197 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.830 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds