Wall clock time and date at job start Sun Mar 7 2021 00:08:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.46931 * 2 1 4 4 C 1.50696 * 109.47387 * 119.99685 * 2 1 3 5 5 C 1.38709 * 120.02762 * 75.00248 * 4 2 1 6 6 O 1.35900 * 120.05786 * 359.97438 * 5 4 2 7 7 C 1.42894 * 117.00366 * 179.97438 * 6 5 4 8 8 C 1.50699 * 109.47579 * 180.02562 * 7 6 5 9 9 O 1.21283 * 119.99341 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.84946 * 25.32798 * 11 10 8 13 13 C 1.53777 * 113.61483 * 156.52827 * 11 10 8 14 14 C 1.53780 * 87.08462 * 89.11378 * 13 11 10 15 15 H 1.09001 * 113.60857 * 270.88662 * 14 13 11 16 16 C 1.50690 * 113.61621 * 140.06639 * 14 13 11 17 17 C 1.38456 * 119.99069 * 119.72138 * 16 14 13 18 18 F 1.35101 * 120.00710 * 0.02958 * 17 16 14 19 19 C 1.38440 * 119.98018 * 179.76422 * 17 16 14 20 20 C 1.38398 * 119.94402 * 0.53481 * 19 17 16 21 21 F 1.35100 * 120.01297 * 179.73824 * 20 19 17 22 22 C 1.38497 * 119.97836 * 359.72299 * 20 19 17 23 23 C 1.38189 * 120.02314 * 359.97438 * 22 20 19 24 24 C 1.53783 * 113.61205 * 254.13500 * 11 10 8 25 25 C 1.38759 * 119.88974 * 179.97438 * 5 4 2 26 26 C 1.38120 * 119.94381 * 0.02562 * 25 5 4 27 27 C 1.38285 * 120.05710 * 0.02562 * 26 25 5 28 28 C 1.38171 * 120.03158 * 255.00373 * 4 2 1 29 29 H 0.96701 * 114.00227 * 60.00977 * 1 2 3 30 30 H 1.08995 * 109.47667 * 239.99939 * 2 1 3 31 31 H 1.48504 * 109.99618 * 298.67550 * 3 2 1 32 32 H 1.48494 * 109.99943 * 59.99525 * 3 2 1 33 33 H 1.09001 * 109.47530 * 300.00843 * 7 6 5 34 34 H 1.08998 * 109.46987 * 60.00416 * 7 6 5 35 35 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 36 36 H 1.08996 * 113.61500 * 203.66679 * 13 11 10 37 37 H 1.09004 * 113.61165 * 334.47675 * 13 11 10 38 38 H 1.07994 * 120.02803 * 180.25892 * 19 17 16 39 39 H 1.07994 * 119.99205 * 179.97438 * 22 20 19 40 40 H 1.08003 * 119.97638 * 180.02562 * 23 22 20 41 41 H 1.09006 * 113.61506 * 25.42773 * 24 11 10 42 42 H 1.08995 * 113.61619 * 156.33841 * 24 11 10 43 43 H 1.08001 * 120.02961 * 179.97438 * 25 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 26 25 5 45 45 H 1.08000 * 119.95126 * 179.70618 * 27 26 25 46 46 H 1.08005 * 119.97031 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.8698 -2.0939 1.3070 6 8 1.3559 -2.8106 0.2730 7 6 1.3244 -4.2316 0.4208 8 6 0.7270 -4.8522 -0.8156 9 8 0.3644 -4.1471 -1.7334 10 7 0.5956 -6.1908 -0.9017 11 6 0.0154 -6.7941 -2.1039 12 1 0.1337 -6.1702 -2.9899 13 6 0.4326 -8.2582 -2.3213 14 6 -0.7874 -8.6500 -1.4711 15 1 -0.5750 -8.7084 -0.4036 16 6 -1.5205 -9.8604 -1.9891 17 6 -1.6413 -10.9884 -1.1954 18 9 -1.1025 -11.0038 0.0434 19 6 -2.3191 -12.0985 -1.6696 20 6 -2.8657 -12.0833 -2.9410 21 9 -3.5228 -13.1677 -3.4071 22 6 -2.7390 -10.9557 -3.7352 23 6 -2.0677 -9.8460 -3.2584 24 6 -1.4184 -7.3124 -1.9024 25 6 2.3336 -2.7451 2.4411 26 6 2.8549 -2.0144 3.4909 27 6 2.9143 -0.6350 3.4126 28 6 2.4537 0.0160 2.2834 29 1 -0.3934 0.4416 -0.7651 30 1 1.7924 -0.5138 -0.8899 31 1 1.5878 2.4585 -1.2244 32 1 1.5613 2.4679 1.2084 33 1 2.3389 -4.6050 0.5606 34 1 0.7183 -4.4932 1.2882 35 1 0.8860 -6.7548 -0.1678 36 1 0.3636 -8.5823 -3.3596 37 1 1.3873 -8.5130 -1.8610 38 1 -2.4174 -12.9773 -1.0496 39 1 -3.1651 -10.9437 -4.7275 40 1 -1.9697 -8.9670 -3.8782 41 1 -1.9579 -6.8046 -1.1029 42 1 -1.9927 -7.3785 -2.8265 43 1 2.2864 -3.8222 2.5033 44 1 3.2157 -2.5206 4.3740 45 1 3.3178 -0.0651 4.2365 46 1 2.5015 1.0934 2.2245 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:22 Heat of formation + Delta-G solvation = -98.728480 kcal Electronic energy + Delta-G solvation = -32706.675922 eV Core-core repulsion = 27779.707598 eV Total energy + Delta-G solvation = -4926.968324 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -50.08601 -50.05820 -41.77663 -41.26055 -40.21908 -38.89404 -38.26560 -37.61942 -34.71843 -32.88903 -31.97410 -31.66430 -31.13365 -29.33354 -26.75038 -26.65798 -26.12723 -24.35441 -23.69326 -22.85444 -22.48570 -21.82202 -20.32833 -19.36764 -19.30532 -18.59753 -18.44506 -18.14069 -17.55949 -17.36691 -17.06073 -16.97338 -16.89493 -16.79736 -16.54430 -16.38503 -15.76703 -15.60062 -15.54773 -15.47540 -15.22750 -15.18316 -14.90359 -14.65391 -14.04941 -13.93606 -13.82289 -13.79538 -13.59603 -13.57858 -13.43367 -13.07945 -12.85839 -12.64223 -12.57607 -12.12310 -12.08073 -11.82043 -11.78130 -11.76183 -11.34010 -11.03522 -10.43981 -10.21071 -10.10332 -9.96426 -9.61273 -9.21057 -4.96696 -0.14319 -0.04881 0.23432 0.42591 1.27813 1.39817 1.45967 1.56718 1.88939 2.26419 2.57416 2.67061 2.80788 3.27861 3.42871 3.44076 3.46543 3.51493 3.62937 3.65842 3.78015 3.84477 3.91402 3.93744 3.96555 4.06290 4.06933 4.15908 4.16643 4.25954 4.34687 4.52723 4.57667 4.66332 4.68416 4.72397 4.80755 4.82975 4.88766 4.89798 4.97818 4.98657 5.06075 5.08980 5.23756 5.28687 5.39534 5.52866 5.53295 5.71067 5.76047 6.26100 6.43167 6.56521 7.08797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.085 4.085 3 Si 0.779 3.221 4 C -0.130 4.130 5 C 0.129 3.871 6 O -0.311 6.311 7 C 0.035 3.965 8 C 0.518 3.482 9 O -0.566 6.566 10 N -0.695 5.695 11 C 0.116 3.884 12 H 0.091 0.909 13 C -0.120 4.120 14 C -0.071 4.071 15 H 0.106 0.894 16 C -0.112 4.112 17 C 0.117 3.883 18 F -0.136 7.136 19 C -0.198 4.198 20 C 0.107 3.893 21 F -0.142 7.142 22 C -0.155 4.155 23 C -0.056 4.056 24 C -0.141 4.141 25 C -0.212 4.212 26 C -0.075 4.075 27 C -0.155 4.155 28 C -0.090 4.090 29 H 0.388 0.612 30 H 0.067 0.933 31 H -0.290 1.290 32 H -0.284 1.284 33 H 0.126 0.874 34 H 0.117 0.883 35 H 0.420 0.580 36 H 0.112 0.888 37 H 0.090 0.910 38 H 0.151 0.849 39 H 0.161 0.839 40 H 0.170 0.830 41 H 0.066 0.934 42 H 0.108 0.892 43 H 0.157 0.843 44 H 0.156 0.844 45 H 0.151 0.849 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.240 -2.385 1.836 6.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.192 4.192 3 Si 0.683 3.317 4 C -0.130 4.130 5 C 0.083 3.917 6 O -0.224 6.224 7 C -0.043 4.043 8 C 0.304 3.696 9 O -0.444 6.444 10 N -0.348 5.348 11 C 0.011 3.989 12 H 0.109 0.891 13 C -0.158 4.158 14 C -0.089 4.089 15 H 0.124 0.876 16 C -0.113 4.113 17 C 0.098 3.902 18 F -0.115 7.115 19 C -0.218 4.218 20 C 0.088 3.912 21 F -0.121 7.121 22 C -0.174 4.174 23 C -0.074 4.074 24 C -0.179 4.179 25 C -0.230 4.230 26 C -0.092 4.092 27 C -0.173 4.173 28 C -0.107 4.107 29 H 0.237 0.763 30 H 0.085 0.915 31 H -0.217 1.217 32 H -0.211 1.211 33 H 0.144 0.856 34 H 0.135 0.865 35 H 0.257 0.743 36 H 0.130 0.870 37 H 0.109 0.891 38 H 0.169 0.831 39 H 0.179 0.821 40 H 0.188 0.812 41 H 0.085 0.915 42 H 0.126 0.874 43 H 0.175 0.825 44 H 0.174 0.826 45 H 0.169 0.831 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 4.788 -1.361 1.573 5.221 hybrid contribution -1.453 -1.069 0.031 1.804 sum 3.335 -2.430 1.604 4.428 Atomic orbital electron populations 1.86550 1.18981 1.80799 1.50234 1.25022 0.83828 1.12306 0.98061 0.94118 0.89893 0.71161 0.76557 1.18862 1.05652 0.90991 0.97536 1.19039 0.94120 0.90980 0.87536 1.86150 1.78038 1.18660 1.39554 1.22714 1.04618 0.79926 0.97053 1.20450 0.78096 0.82903 0.88160 1.90758 1.50116 1.62395 1.41153 1.45378 1.63290 1.05492 1.20686 1.21867 0.94162 0.94647 0.88262 0.89105 1.23401 0.97966 0.92320 1.02085 1.21597 0.96205 0.90330 1.00760 0.87587 1.19971 1.01613 0.94668 0.95045 1.17292 0.97207 0.94808 0.80911 1.91503 1.83791 1.96826 1.39369 1.21171 1.03047 1.00658 0.96924 1.17573 0.95915 0.84735 0.93002 1.91525 1.78638 1.53330 1.88615 1.21516 1.02045 0.91964 1.01884 1.21067 0.93814 0.98523 0.93985 1.23648 0.96545 0.94533 1.03171 1.21601 1.05543 1.01895 0.93954 1.21407 0.95481 0.94053 0.98297 1.21395 1.02176 0.95254 0.98471 1.21154 0.96848 1.00296 0.92426 0.76272 0.91484 1.21722 1.21097 0.85604 0.86518 0.74268 0.86977 0.89138 0.83138 0.82111 0.81227 0.91470 0.87381 0.82520 0.82611 0.83126 0.84143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -5.84 12.86 -148.98 -1.92 -7.76 16 2 C -0.08 -0.59 2.37 71.23 0.17 -0.42 16 3 Si 0.78 1.44 30.20 68.60 2.07 3.51 16 4 C -0.13 -0.90 5.30 -19.77 -0.10 -1.00 16 5 C 0.13 0.77 6.66 22.51 0.15 0.92 16 6 O -0.31 -2.49 9.00 -73.39 -0.66 -3.15 16 7 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 8 C 0.52 1.44 7.91 87.66 0.69 2.13 16 9 O -0.57 -7.93 16.12 16.00 0.26 -7.67 16 10 N -0.69 3.32 5.26 -440.04 -2.32 1.00 16 11 C 0.12 -0.49 4.29 45.52 0.20 -0.29 16 12 H 0.09 0.01 7.50 -2.38 -0.02 -0.01 16 13 C -0.12 0.99 7.29 31.12 0.23 1.22 16 14 C -0.07 0.45 3.79 -10.92 -0.04 0.40 16 15 H 0.11 -0.68 7.45 -2.39 -0.02 -0.70 16 16 C -0.11 0.39 5.30 -19.82 -0.10 0.28 16 17 C 0.12 0.03 7.24 22.37 0.16 0.19 16 18 F -0.14 -0.26 16.36 44.97 0.74 0.48 16 19 C -0.20 -0.19 10.01 22.36 0.22 0.04 16 20 C 0.11 0.12 7.30 22.37 0.16 0.28 16 21 F -0.14 -0.61 17.27 44.97 0.78 0.17 16 22 C -0.16 0.51 10.03 22.32 0.22 0.74 16 23 C -0.06 0.32 8.61 22.26 0.19 0.51 16 24 C -0.14 0.71 7.27 31.22 0.23 0.94 16 25 C -0.21 0.11 9.04 22.37 0.20 0.31 16 26 C -0.07 0.16 10.04 22.25 0.22 0.38 16 27 C -0.16 0.09 10.04 22.28 0.22 0.32 16 28 C -0.09 -0.27 8.66 22.26 0.19 -0.08 16 29 H 0.39 1.19 8.74 -74.06 -0.65 0.55 16 30 H 0.07 0.51 7.83 -2.39 -0.02 0.49 16 31 H -0.29 -1.80 7.11 99.48 0.71 -1.09 16 32 H -0.28 -1.80 6.75 99.48 0.67 -1.13 16 33 H 0.13 -1.08 7.66 -2.39 -0.02 -1.10 16 34 H 0.12 -0.80 7.66 -2.39 -0.02 -0.81 16 35 H 0.42 -4.82 8.70 -92.71 -0.81 -5.63 16 36 H 0.11 -1.10 7.72 -2.39 -0.02 -1.12 16 37 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 38 H 0.15 -0.08 8.06 -2.91 -0.02 -0.10 16 39 H 0.16 -1.12 8.06 -2.91 -0.02 -1.15 16 40 H 0.17 -1.85 6.66 -2.91 -0.02 -1.86 16 41 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 42 H 0.11 -0.77 6.32 -2.39 -0.02 -0.78 16 43 H 0.16 -1.14 6.30 -2.91 -0.02 -1.15 16 44 H 0.16 -1.24 8.06 -2.91 -0.02 -1.26 16 45 H 0.15 -0.83 8.06 -2.91 -0.02 -0.85 16 46 H 0.14 0.07 4.90 -2.91 -0.01 0.05 16 Total: 0.00 -27.10 393.26 2.15 -24.95 By element: Atomic # 1 Polarization: -18.33 SS G_CDS: -0.39 Total: -18.71 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 3.59 Total: 7.18 kcal Atomic # 7 Polarization: 3.32 SS G_CDS: -2.32 Total: 1.00 kcal Atomic # 8 Polarization: -16.26 SS G_CDS: -2.32 Total: -18.57 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 1.51 Total: 0.65 kcal Atomic # 14 Polarization: 1.44 SS G_CDS: 2.07 Total: 3.51 kcal Total: -27.10 2.15 -24.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.779 kcal (2) G-P(sol) polarization free energy of solvation -27.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.153 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.950 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds