Wall clock time and date at job start Sun Mar 7 2021 00:08:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47119 * 2 1 4 4 C 1.50700 * 109.47380 * 120.00364 * 2 1 3 5 5 C 1.38264 * 119.94517 * 64.99440 * 4 2 1 6 6 C 1.38146 * 120.05611 * 180.02562 * 5 4 2 7 7 C 1.38736 * 119.94338 * 0.02562 * 6 5 4 8 8 O 1.35899 * 120.05305 * 180.02562 * 7 6 5 9 9 C 1.42908 * 116.99727 * 179.97438 * 8 7 6 10 10 C 1.50698 * 109.46887 * 179.97438 * 9 8 7 11 11 O 1.21283 * 120.00472 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99538 * 180.02562 * 10 9 8 13 13 C 1.46499 * 119.99665 * 179.72653 * 12 10 9 14 14 H 1.09000 * 112.85090 * 25.60669 * 13 12 10 15 15 C 1.53784 * 113.61758 * 156.80808 * 13 12 10 16 16 C 1.53785 * 87.08103 * 89.11402 * 15 13 12 17 17 H 1.09001 * 113.61624 * 270.88407 * 16 15 13 18 18 C 1.50702 * 113.61086 * 140.06781 * 16 15 13 19 19 C 1.38458 * 119.98480 * 120.00309 * 18 16 15 20 20 F 1.35096 * 120.00944 * 359.95288 * 19 18 16 21 21 C 1.38439 * 119.96992 * 179.97438 * 19 18 16 22 22 C 1.38392 * 119.95559 * 359.97438 * 21 19 18 23 23 F 1.35095 * 120.01680 * 179.97438 * 22 21 19 24 24 C 1.38507 * 119.97097 * 0.02562 * 22 21 19 25 25 C 1.38178 * 120.02464 * 359.74288 * 24 22 21 26 26 C 1.53790 * 113.61381 * 254.41411 * 13 12 10 27 27 C 1.38734 * 119.88685 * 0.27331 * 7 6 5 28 28 C 1.38144 * 119.94091 * 359.42757 * 27 7 6 29 29 H 0.96703 * 113.99973 * 60.00015 * 1 2 3 30 30 H 1.09006 * 109.47190 * 240.00146 * 2 1 3 31 31 H 1.48497 * 110.00176 * 298.68018 * 3 2 1 32 32 H 1.48496 * 109.99929 * 60.00071 * 3 2 1 33 33 H 1.08001 * 119.97081 * 359.97438 * 5 4 2 34 34 H 1.08002 * 120.02836 * 180.02562 * 6 5 4 35 35 H 1.09003 * 109.46467 * 60.00372 * 9 8 7 36 36 H 1.08993 * 109.47113 * 300.00637 * 9 8 7 37 37 H 0.97001 * 120.00485 * 0.02562 * 12 10 9 38 38 H 1.08994 * 113.61705 * 203.66826 * 15 13 12 39 39 H 1.09000 * 113.60767 * 334.57134 * 15 13 12 40 40 H 1.08002 * 120.02069 * 179.97438 * 21 19 18 41 41 H 1.08004 * 119.98263 * 179.97438 * 24 22 21 42 42 H 1.08005 * 119.97515 * 180.25588 * 25 24 22 43 43 H 1.08991 * 113.61523 * 25.43812 * 26 13 12 44 44 H 1.09003 * 113.60928 * 156.33750 * 26 13 12 45 45 H 1.08003 * 120.02498 * 179.72091 * 27 7 6 46 46 H 1.08008 * 119.96661 * 180.27236 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1430 -2.7140 2.5244 7 6 2.8523 -2.0143 3.4899 8 8 3.3053 -2.6550 4.5994 9 6 4.0286 -1.8717 5.5510 10 6 4.4475 -2.7448 6.7057 11 8 4.1559 -3.9220 6.7128 12 7 5.1462 -2.2174 7.7304 13 6 5.5482 -3.0648 8.8557 14 1 5.6368 -4.1165 8.5832 15 6 6.7618 -2.5249 9.6308 16 6 5.7605 -1.7496 10.5032 17 1 5.5194 -0.7595 10.1164 18 6 6.1203 -1.7344 11.9666 19 6 6.3451 -0.5300 12.6114 20 9 6.2430 0.6313 11.9288 21 6 6.6751 -0.5164 13.9559 22 6 6.7792 -1.7068 14.6539 23 9 7.1017 -1.6950 15.9658 24 6 6.5538 -2.9105 14.0067 25 6 6.2199 -2.9226 12.6660 26 6 4.7235 -2.8266 10.1318 27 6 3.0938 -0.6583 3.3231 28 6 2.6380 -0.0109 2.1911 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 1.5879 2.4586 -1.2242 32 1 1.5614 2.4678 1.2085 33 1 1.1307 -2.6045 0.6459 34 1 1.9499 -3.7687 2.6540 35 1 3.3920 -1.0662 5.9173 36 1 4.9132 -1.4481 5.0756 37 1 5.3791 -1.2758 7.7249 38 1 7.3103 -3.2942 10.1742 39 1 7.4100 -1.8827 9.0345 40 1 6.8511 0.4226 14.4596 41 1 6.6355 -3.8396 14.5512 42 1 6.0402 -3.8614 12.1631 43 1 3.7275 -2.4280 9.9398 44 1 4.7159 -3.6783 10.8120 45 1 3.6418 -0.1105 4.0754 46 1 2.8296 1.0438 2.0588 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:08:27 Heat of formation + Delta-G solvation = -100.790425 kcal Electronic energy + Delta-G solvation = -31992.749918 eV Core-core repulsion = 27065.692182 eV Total energy + Delta-G solvation = -4927.057737 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -50.07326 -50.04764 -41.74342 -41.20689 -40.21742 -39.09664 -38.51083 -37.30274 -34.69949 -32.47192 -31.93237 -31.82115 -31.53961 -29.51281 -26.72633 -26.36049 -25.94073 -24.35940 -23.99473 -22.94812 -22.34403 -21.75475 -20.30626 -19.47873 -19.33610 -18.57148 -18.41688 -18.12868 -17.56727 -17.38240 -17.04753 -16.95500 -16.80268 -16.77577 -16.53676 -16.37302 -15.74912 -15.61495 -15.57899 -15.51081 -15.24027 -15.17490 -14.72619 -14.45562 -14.12943 -13.99964 -13.96970 -13.77868 -13.57053 -13.54708 -13.46793 -13.36520 -12.84341 -12.55977 -12.47220 -12.19674 -12.05575 -11.89188 -11.74032 -11.71381 -11.31732 -11.02430 -10.46099 -10.18919 -10.08838 -10.03204 -9.59706 -9.22435 -4.91404 -0.12871 -0.03445 0.27112 0.31563 1.32651 1.42120 1.46482 1.61788 1.96094 2.27910 2.57763 2.62110 2.82172 3.29781 3.43215 3.44706 3.48252 3.53017 3.64567 3.67839 3.79221 3.83838 3.86606 3.93195 3.98059 4.04694 4.08473 4.10791 4.17775 4.29995 4.40990 4.46132 4.60218 4.68415 4.70329 4.74735 4.82933 4.84909 4.90766 4.91358 4.97225 5.01053 5.07905 5.11271 5.16307 5.25134 5.25772 5.51123 5.55126 5.69211 5.72537 6.25847 6.45228 6.60784 7.11280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.085 4.085 3 Si 0.768 3.232 4 C -0.124 4.124 5 C -0.061 4.061 6 C -0.165 4.165 7 C 0.121 3.879 8 O -0.318 6.318 9 C 0.034 3.966 10 C 0.517 3.483 11 O -0.569 6.569 12 N -0.694 5.694 13 C 0.116 3.884 14 H 0.091 0.909 15 C -0.120 4.120 16 C -0.071 4.071 17 H 0.107 0.893 18 C -0.111 4.111 19 C 0.117 3.883 20 F -0.136 7.136 21 C -0.199 4.199 22 C 0.107 3.893 23 F -0.143 7.143 24 C -0.156 4.156 25 C -0.056 4.056 26 C -0.141 4.141 27 C -0.200 4.200 28 C -0.080 4.080 29 H 0.394 0.606 30 H 0.092 0.908 31 H -0.290 1.290 32 H -0.295 1.295 33 H 0.136 0.864 34 H 0.130 0.870 35 H 0.123 0.877 36 H 0.130 0.870 37 H 0.420 0.580 38 H 0.111 0.889 39 H 0.090 0.910 40 H 0.150 0.850 41 H 0.161 0.839 42 H 0.171 0.829 43 H 0.068 0.932 44 H 0.108 0.892 45 H 0.166 0.834 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.832 3.306 -1.625 6.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.193 4.193 3 Si 0.673 3.327 4 C -0.124 4.124 5 C -0.079 4.079 6 C -0.184 4.184 7 C 0.076 3.924 8 O -0.231 6.231 9 C -0.043 4.043 10 C 0.303 3.697 11 O -0.447 6.447 12 N -0.348 5.348 13 C 0.010 3.990 14 H 0.109 0.891 15 C -0.158 4.158 16 C -0.089 4.089 17 H 0.125 0.875 18 C -0.113 4.113 19 C 0.098 3.902 20 F -0.115 7.115 21 C -0.218 4.218 22 C 0.087 3.913 23 F -0.121 7.121 24 C -0.174 4.174 25 C -0.074 4.074 26 C -0.179 4.179 27 C -0.218 4.218 28 C -0.097 4.097 29 H 0.244 0.756 30 H 0.110 0.890 31 H -0.217 1.217 32 H -0.223 1.223 33 H 0.154 0.846 34 H 0.148 0.852 35 H 0.140 0.860 36 H 0.147 0.853 37 H 0.258 0.742 38 H 0.130 0.870 39 H 0.109 0.891 40 H 0.168 0.832 41 H 0.179 0.821 42 H 0.188 0.812 43 H 0.087 0.913 44 H 0.126 0.874 45 H 0.183 0.817 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 4.507 2.827 -1.002 5.414 hybrid contribution -1.211 0.699 -0.044 1.399 sum 3.297 3.527 -1.046 4.939 Atomic orbital electron populations 1.86555 1.18838 1.80691 1.50981 1.25019 0.83838 1.12019 0.98448 0.94180 0.90175 0.71934 0.76375 1.19435 1.01640 0.94264 0.97087 1.20941 0.96531 0.94073 0.96389 1.20629 1.02269 1.01167 0.94326 1.19188 0.94820 0.91834 0.86576 1.86125 1.69256 1.38242 1.29484 1.22762 0.99551 0.93599 0.88408 1.20493 0.77619 0.87915 0.83633 1.90767 1.55559 1.18724 1.79667 1.45381 1.55848 1.14163 1.19427 1.21870 0.96227 0.95710 0.85173 0.89095 1.23403 0.95449 1.00238 0.96716 1.21612 0.97822 1.00313 0.89201 0.87512 1.19979 1.02524 0.91436 0.97315 1.17290 1.01766 0.81746 0.89414 1.91501 1.93583 1.46961 1.79428 1.21169 1.06874 0.99620 0.94177 1.17577 1.00906 0.94547 0.78248 1.91523 1.90182 1.97412 1.33027 1.21518 1.02275 0.97507 0.96131 1.21071 0.95184 0.98614 0.92517 1.23651 0.98039 0.99170 0.97041 1.21473 1.06417 0.92842 1.01083 1.21048 0.96114 1.00102 0.92437 0.75607 0.89009 1.21702 1.22251 0.84630 0.85230 0.85956 0.85267 0.74181 0.87035 0.89118 0.83183 0.82144 0.81181 0.91334 0.87407 0.81705 0.83430 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.47 12.81 -148.98 -1.91 -3.38 16 2 C -0.08 0.05 2.79 71.24 0.20 0.25 16 3 Si 0.77 -2.29 29.85 68.60 2.05 -0.25 16 4 C -0.12 -0.30 5.38 -19.85 -0.11 -0.40 16 5 C -0.06 -0.25 9.68 22.25 0.22 -0.04 16 6 C -0.17 -0.93 9.99 22.37 0.22 -0.70 16 7 C 0.12 0.49 6.69 22.51 0.15 0.64 16 8 O -0.32 -1.83 9.67 -73.37 -0.71 -2.54 16 9 C 0.03 -0.13 5.22 71.24 0.37 0.24 16 10 C 0.52 0.68 7.91 87.66 0.69 1.38 16 11 O -0.57 -7.32 16.12 16.00 0.26 -7.07 16 12 N -0.69 4.13 5.26 -440.02 -2.32 1.81 16 13 C 0.12 -0.58 4.29 45.52 0.20 -0.38 16 14 H 0.09 -0.06 7.50 -2.39 -0.02 -0.07 16 15 C -0.12 1.07 7.29 31.12 0.23 1.30 16 16 C -0.07 0.50 3.79 -10.92 -0.04 0.46 16 17 H 0.11 -0.77 7.44 -2.39 -0.02 -0.79 16 18 C -0.11 0.44 5.30 -19.81 -0.10 0.33 16 19 C 0.12 -0.02 7.25 22.37 0.16 0.15 16 20 F -0.14 -0.20 16.36 44.97 0.74 0.54 16 21 C -0.20 -0.14 10.01 22.35 0.22 0.09 16 22 C 0.11 0.09 7.30 22.37 0.16 0.26 16 23 F -0.14 -0.59 17.27 44.97 0.78 0.18 16 24 C -0.16 0.55 10.03 22.32 0.22 0.78 16 25 C -0.06 0.34 8.62 22.25 0.19 0.53 16 26 C -0.14 0.83 7.27 31.22 0.23 1.05 16 27 C -0.20 0.25 9.04 22.37 0.20 0.45 16 28 C -0.08 0.03 8.66 22.25 0.19 0.22 16 29 H 0.39 -2.13 8.74 -74.05 -0.65 -2.78 16 30 H 0.09 -0.39 7.96 -2.38 -0.02 -0.41 16 31 H -0.29 -0.45 7.11 99.48 0.71 0.25 16 32 H -0.29 -1.03 7.04 99.48 0.70 -0.33 16 33 H 0.14 0.30 8.06 -2.91 -0.02 0.27 16 34 H 0.13 0.71 8.06 -2.91 -0.02 0.69 16 35 H 0.12 -1.17 7.65 -2.39 -0.02 -1.18 16 36 H 0.13 -1.38 7.67 -2.39 -0.02 -1.40 16 37 H 0.42 -5.37 8.70 -92.71 -0.81 -6.18 16 38 H 0.11 -1.14 7.73 -2.39 -0.02 -1.16 16 39 H 0.09 -0.93 8.14 -2.39 -0.02 -0.94 16 40 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 41 H 0.16 -1.15 8.06 -2.91 -0.02 -1.18 16 42 H 0.17 -1.92 6.65 -2.91 -0.02 -1.94 16 43 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 44 H 0.11 -0.84 6.31 -2.39 -0.02 -0.86 16 45 H 0.17 -1.47 6.30 -2.91 -0.02 -1.49 16 46 H 0.15 -0.71 4.86 -2.91 -0.01 -0.72 16 Total: 0.00 -26.83 394.03 2.14 -24.69 By element: Atomic # 1 Polarization: -20.24 SS G_CDS: -0.36 Total: -20.59 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: 3.61 Total: 6.60 kcal Atomic # 7 Polarization: 4.13 SS G_CDS: -2.32 Total: 1.81 kcal Atomic # 8 Polarization: -10.63 SS G_CDS: -2.36 Total: -12.99 kcal Atomic # 9 Polarization: -0.79 SS G_CDS: 1.51 Total: 0.72 kcal Atomic # 14 Polarization: -2.29 SS G_CDS: 2.05 Total: -0.25 kcal Total: -26.83 2.14 -24.69 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.101 kcal (2) G-P(sol) polarization free energy of solvation -26.826 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds