Wall clock time and date at job start Sun Mar 7 2021 00:09:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.38249 * 119.94562 * 244.71916 * 4 2 1 6 6 C 1.38162 * 120.05463 * 179.72316 * 5 4 2 7 7 C 1.38713 * 119.94533 * 0.55415 * 6 5 4 8 8 O 1.35897 * 120.05323 * 179.74678 * 7 6 5 9 9 C 1.42901 * 117.00604 * 359.97438 * 8 7 6 10 10 C 1.50700 * 109.47445 * 180.02562 * 9 8 7 11 11 O 1.21277 * 119.99977 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99725 * 179.97438 * 10 9 8 13 13 C 1.46505 * 119.99926 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.84770 * 334.67046 * 13 12 10 15 15 C 1.53779 * 113.61229 * 105.86212 * 13 12 10 16 16 C 1.54051 * 86.98147 * 89.16572 * 15 13 12 17 17 H 1.08997 * 113.68938 * 270.87215 * 16 15 13 18 18 C 1.50707 * 113.61880 * 139.98108 * 16 15 13 19 19 C 1.38453 * 119.98768 * 142.23163 * 18 16 15 20 20 F 1.35098 * 120.01184 * 0.02562 * 19 18 16 21 21 C 1.38445 * 119.97278 * 179.76632 * 19 18 16 22 22 C 1.38400 * 119.94522 * 0.48156 * 21 19 18 23 23 F 1.35102 * 120.00640 * 179.78601 * 22 21 19 24 24 C 1.38495 * 119.97841 * 359.76978 * 22 21 19 25 25 C 1.38189 * 120.02390 * 359.97438 * 24 22 21 26 26 C 1.53777 * 113.61796 * 203.47661 * 13 12 10 27 27 C 1.38750 * 119.88728 * 359.72338 * 7 6 5 28 28 N 1.48006 * 120.02505 * 179.97438 * 27 7 6 29 29 O 1.21799 * 119.99876 * 180.02562 * 28 27 7 30 30 O 1.21795 * 120.00126 * 0.02567 * 28 27 7 31 31 C 1.38116 * 119.94323 * 0.02562 * 27 7 6 32 32 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 33 33 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 34 34 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 35 35 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 36 36 H 1.08000 * 119.96862 * 359.97438 * 5 4 2 37 37 H 1.08006 * 120.02748 * 180.25557 * 6 5 4 38 38 H 1.09005 * 109.46775 * 299.99940 * 9 8 7 39 39 H 1.08997 * 109.47103 * 59.99569 * 9 8 7 40 40 H 0.97001 * 120.00291 * 359.97438 * 12 10 9 41 41 H 1.09000 * 113.61386 * 203.66377 * 15 13 12 42 42 H 1.08996 * 113.61348 * 334.57444 * 15 13 12 43 43 H 1.07995 * 120.02222 * 180.25186 * 21 19 18 44 44 H 1.07995 * 119.98591 * 179.97438 * 24 22 21 45 45 H 1.07995 * 119.97015 * 179.97438 * 25 24 22 46 46 H 1.08999 * 113.61144 * 25.42819 * 26 13 12 47 47 H 1.08997 * 113.61867 * 156.33752 * 26 13 12 48 48 H 1.08012 * 119.97252 * 179.97438 * 31 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6437 -0.0125 2.1878 6 6 3.1003 -0.6603 3.3195 7 6 2.8535 -2.0147 3.4891 8 8 3.3061 -2.6552 4.5989 9 6 4.0299 -1.8721 5.5503 10 6 4.4493 -2.7453 6.7047 11 8 4.1568 -3.9222 6.7123 12 7 5.1494 -2.2182 7.7286 13 6 5.5566 -3.0670 8.8512 14 1 4.9083 -3.9331 8.9839 15 6 7.0549 -3.4135 8.8495 16 6 7.2695 -2.1296 9.6732 17 1 7.4351 -1.2410 9.0641 18 6 8.2868 -2.2818 10.7747 19 6 9.1498 -1.2398 11.0685 20 9 9.0798 -0.0866 10.3683 21 6 10.0810 -1.3782 12.0836 22 6 10.1545 -2.5620 12.7969 23 9 11.0656 -2.6999 13.7849 24 6 9.2936 -3.6048 12.4978 25 6 8.3611 -3.4636 11.4879 26 6 5.8162 -2.2870 10.1508 27 6 2.1433 -2.7142 2.5240 28 7 1.8786 -4.1595 2.7017 29 8 1.2555 -4.7732 1.8540 30 8 2.2839 -4.7352 3.6955 31 6 1.6844 -2.0609 1.3970 32 1 -0.3932 0.4418 0.7651 33 1 1.7923 -0.5139 -0.8900 34 1 1.5615 2.4679 -1.2085 35 1 1.5881 2.4585 1.2242 36 1 2.8398 1.0410 2.0529 37 1 3.6533 -0.1136 4.0691 38 1 4.9149 -1.4493 5.0747 39 1 3.3940 -1.0660 5.9162 40 1 5.3836 -1.2770 7.7224 41 1 7.2924 -4.3269 9.3949 42 1 7.5096 -3.3800 7.8595 43 1 10.7519 -0.5645 12.3161 44 1 9.3512 -4.5287 13.0541 45 1 7.6905 -4.2774 11.2551 46 1 5.2717 -1.3446 10.2105 47 1 5.7157 -2.8929 11.0512 48 1 1.1318 -2.6050 0.6452 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:15 Heat of formation + Delta-G solvation = -96.794878 kcal Electronic energy + Delta-G solvation = -38859.976957 eV Core-core repulsion = 33102.076045 eV Total energy + Delta-G solvation = -5757.900912 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.126 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -50.12092 -50.04241 -43.04505 -41.93401 -41.50371 -40.44642 -39.59473 -38.69424 -37.64135 -37.14334 -34.80090 -33.52766 -32.45865 -32.05953 -31.71961 -29.95175 -27.61005 -26.99317 -26.84022 -26.24008 -24.52866 -24.12297 -23.07558 -22.82015 -22.09119 -20.59434 -20.42484 -19.48738 -19.41626 -19.23611 -18.63944 -18.39373 -18.36045 -18.24787 -17.73287 -17.56730 -17.09214 -17.08220 -17.02759 -16.71846 -16.55951 -16.38104 -16.31127 -15.87571 -15.82976 -15.59194 -15.50244 -15.33659 -15.08199 -14.89645 -14.29904 -14.15317 -14.02662 -13.91873 -13.84435 -13.70001 -13.61085 -13.33099 -12.97047 -12.70314 -12.60934 -12.54362 -12.26882 -12.21825 -12.01356 -11.93639 -11.87019 -11.75371 -11.53318 -11.05517 -10.99687 -10.89872 -10.33126 -10.20979 -9.95619 -9.70500 -5.23723 -1.15351 -0.40875 -0.23370 -0.15585 0.36013 0.50899 0.97239 1.02551 1.29867 1.32664 1.73301 1.90326 2.10840 2.15072 2.72820 2.94754 2.98704 3.10386 3.13167 3.20053 3.29205 3.30985 3.34130 3.41311 3.48370 3.49979 3.52988 3.57173 3.66365 3.67263 3.74848 3.86341 4.00900 4.11063 4.14801 4.31655 4.37996 4.40915 4.46591 4.54663 4.59673 4.65288 4.65859 4.70882 4.77063 4.79109 4.86408 4.90018 4.91752 5.07569 5.31787 5.41888 5.60333 5.67915 6.13733 6.16204 6.91785 6.95184 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.073 4.073 3 Si 0.690 3.310 4 C -0.155 4.155 5 C -0.026 4.026 6 C -0.210 4.210 7 C 0.200 3.800 8 O -0.253 6.253 9 C 0.031 3.969 10 C 0.517 3.483 11 O -0.492 6.492 12 N -0.711 5.711 13 C 0.123 3.877 14 H 0.111 0.889 15 C -0.142 4.142 16 C -0.075 4.075 17 H 0.104 0.896 18 C -0.116 4.116 19 C 0.133 3.867 20 F -0.129 7.129 21 C -0.190 4.190 22 C 0.128 3.872 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.133 4.133 27 C -0.075 4.075 28 N 0.029 4.971 29 O -0.177 6.177 30 O -0.118 6.118 31 C 0.010 3.990 32 H 0.378 0.622 33 H 0.126 0.874 34 H -0.250 1.250 35 H -0.257 1.257 36 H 0.149 0.851 37 H 0.156 0.844 38 H 0.103 0.897 39 H 0.102 0.898 40 H 0.403 0.597 41 H 0.099 0.901 42 H 0.079 0.921 43 H 0.149 0.851 44 H 0.145 0.855 45 H 0.146 0.854 46 H 0.080 0.920 47 H 0.103 0.897 48 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.713 8.349 1.624 9.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.590 3.410 4 C -0.157 4.157 5 C -0.044 4.044 6 C -0.229 4.229 7 C 0.151 3.849 8 O -0.163 6.163 9 C -0.048 4.048 10 C 0.300 3.700 11 O -0.364 6.364 12 N -0.366 5.366 13 C 0.018 3.982 14 H 0.129 0.871 15 C -0.181 4.181 16 C -0.094 4.094 17 H 0.122 0.878 18 C -0.117 4.117 19 C 0.114 3.886 20 F -0.108 7.108 21 C -0.210 4.210 22 C 0.109 3.891 23 F -0.108 7.108 24 C -0.177 4.177 25 C -0.078 4.078 26 C -0.171 4.171 27 C -0.160 4.160 28 N 0.549 4.451 29 O -0.386 6.386 30 O -0.342 6.342 31 C -0.009 4.009 32 H 0.226 0.774 33 H 0.144 0.856 34 H -0.175 1.175 35 H -0.182 1.182 36 H 0.167 0.833 37 H 0.174 0.826 38 H 0.121 0.879 39 H 0.120 0.880 40 H 0.237 0.763 41 H 0.118 0.882 42 H 0.097 0.903 43 H 0.167 0.833 44 H 0.163 0.837 45 H 0.164 0.836 46 H 0.099 0.901 47 H 0.121 0.879 48 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 3.461 8.504 0.995 9.235 hybrid contribution -0.562 0.480 0.774 1.070 sum 2.899 8.983 1.770 9.604 Atomic orbital electron populations 1.86667 1.17204 1.79849 1.49368 1.25070 0.84352 1.11213 0.97575 0.95105 0.91209 0.73750 0.80956 1.20245 1.02981 0.93394 0.99053 1.21313 0.91471 1.00414 0.91168 1.21269 1.07772 0.92031 1.01793 1.18688 0.89854 0.90863 0.85538 1.86498 1.66803 1.35595 1.27367 1.22722 0.98061 0.94325 0.89675 1.19805 0.78683 0.88538 0.82938 1.90872 1.52455 1.15688 1.77352 1.45453 1.57044 1.13280 1.20785 1.21854 0.96267 0.94772 0.85344 0.87127 1.23640 0.95956 0.97376 1.01100 1.21619 0.92824 1.00139 0.94777 0.87823 1.19783 0.98332 0.93675 0.99903 1.17131 0.96623 0.82635 0.92255 1.91522 1.95482 1.46689 1.77075 1.21085 1.02342 0.99292 0.98241 1.17350 0.89546 0.94341 0.87911 1.91564 1.64411 1.96083 1.58755 1.21271 0.96737 0.99425 1.00307 1.20785 0.97111 0.96618 0.93249 1.23442 0.94564 1.01645 0.97476 1.20586 1.12791 0.82528 1.00077 1.43335 0.98996 1.02429 1.00384 1.94559 1.39598 1.66229 1.38170 1.94695 1.51919 1.69138 1.18416 1.20853 0.92437 0.93903 0.93712 0.77445 0.85641 1.17486 1.18166 0.83341 0.82607 0.87889 0.88001 0.76275 0.88247 0.90274 0.83306 0.83706 0.83622 0.90134 0.87904 0.81827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.45 12.83 -35.23 -0.45 0.00 16 2 C -0.07 0.20 2.80 36.01 0.10 0.31 16 3 Si 0.69 -2.70 29.87 -169.99 -5.08 -7.78 16 4 C -0.16 0.38 5.35 -104.60 -0.56 -0.18 16 5 C -0.03 0.11 8.66 -39.61 -0.34 -0.24 16 6 C -0.21 0.79 9.04 -39.43 -0.36 0.43 16 7 C 0.20 0.04 6.67 -39.22 -0.26 -0.22 16 8 O -0.25 -0.39 7.68 -49.77 -0.38 -0.78 16 9 C 0.03 -0.10 5.22 36.01 0.19 0.09 16 10 C 0.52 -0.20 7.91 -10.99 -0.09 -0.29 16 11 O -0.49 -2.55 16.12 -14.35 -0.23 -2.78 16 12 N -0.71 2.55 5.26 -53.02 -0.28 2.27 16 13 C 0.12 -0.35 4.29 -67.12 -0.29 -0.64 16 14 H 0.11 -0.11 7.50 -51.93 -0.39 -0.50 16 15 C -0.14 0.45 7.27 -25.78 -0.19 0.26 16 16 C -0.08 0.26 3.79 -90.81 -0.34 -0.08 16 17 H 0.10 -0.39 7.44 -51.93 -0.39 -0.77 16 18 C -0.12 0.23 5.30 -104.54 -0.55 -0.32 16 19 C 0.13 -0.07 7.25 -39.43 -0.29 -0.36 16 20 F -0.13 -0.02 16.36 2.25 0.04 0.02 16 21 C -0.19 0.07 10.01 -39.45 -0.39 -0.33 16 22 C 0.13 -0.01 7.30 -39.43 -0.29 -0.30 16 23 F -0.13 -0.18 17.27 2.25 0.04 -0.14 16 24 C -0.16 0.27 10.03 -39.50 -0.40 -0.12 16 25 C -0.06 0.16 8.61 -39.60 -0.34 -0.18 16 26 C -0.13 0.56 7.29 -25.92 -0.19 0.37 16 27 C -0.08 -0.18 6.86 -79.81 -0.55 -0.72 16 28 N 0.03 0.18 4.45 34.03 0.15 0.33 16 29 O -0.18 -1.23 18.45 -29.46 -0.54 -1.77 16 30 O -0.12 -0.96 17.24 -36.49 -0.63 -1.59 16 31 C 0.01 0.00 9.19 -39.61 -0.36 -0.36 16 32 H 0.38 -1.45 8.70 45.56 0.40 -1.05 16 33 H 0.13 -0.43 7.96 -51.93 -0.41 -0.85 16 34 H -0.25 0.01 7.11 56.52 0.40 0.41 16 35 H -0.26 0.66 7.01 56.52 0.40 1.06 16 36 H 0.15 -0.99 4.84 -52.49 -0.25 -1.24 16 37 H 0.16 -1.15 6.30 -52.48 -0.33 -1.48 16 38 H 0.10 -0.67 7.66 -51.93 -0.40 -1.07 16 39 H 0.10 -0.65 7.66 -51.93 -0.40 -1.05 16 40 H 0.40 -2.71 8.70 -40.82 -0.36 -3.06 16 41 H 0.10 -0.37 6.32 -51.93 -0.33 -0.70 16 42 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.15 -0.20 8.06 -52.49 -0.42 -0.62 16 44 H 0.15 -0.47 8.06 -52.49 -0.42 -0.89 16 45 H 0.15 -0.71 6.66 -52.49 -0.35 -1.06 16 46 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 47 H 0.10 -0.47 7.72 -51.93 -0.40 -0.87 16 48 H 0.16 0.02 7.61 -52.48 -0.40 -0.38 16 LS Contribution 419.96 15.07 6.33 6.33 Total: 0.00 -12.88 419.96 -11.44 -24.32 By element: Atomic # 1 Polarization: -10.63 SS G_CDS: -4.90 Total: -15.53 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -5.50 Total: -2.88 kcal Atomic # 7 Polarization: 2.72 SS G_CDS: -0.13 Total: 2.59 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -2.24 Total: -6.93 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.08 Total: -0.12 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: -5.08 Total: -7.78 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -12.88 -11.44 -24.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.475 kcal (2) G-P(sol) polarization free energy of solvation -12.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.320 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.795 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds