Wall clock time and date at job start Sun Mar 7 2021 00:09:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86295 * 109.47387 * 2 1 4 4 C 1.50704 * 109.47194 * 120.00312 * 2 1 3 5 5 C 1.38264 * 119.94536 * 64.99163 * 4 2 1 6 6 C 1.38147 * 120.05256 * 180.02562 * 5 4 2 7 7 C 1.38729 * 119.94632 * 0.02562 * 6 5 4 8 8 O 1.35903 * 120.05601 * 180.02562 * 7 6 5 9 9 C 1.42896 * 116.99812 * 179.97438 * 8 7 6 10 10 F 1.39896 * 109.47093 * 60.00225 * 9 8 7 11 11 F 1.39899 * 109.47312 * 299.99278 * 9 8 7 12 12 C 1.50704 * 109.47006 * 179.97438 * 9 8 7 13 13 O 1.21280 * 119.99905 * 0.02562 * 12 9 8 14 14 N 1.34776 * 120.00197 * 179.97438 * 12 9 8 15 15 C 1.46496 * 120.00015 * 180.02562 * 14 12 9 16 16 H 1.09004 * 112.90889 * 336.25053 * 15 14 12 17 17 C 1.53784 * 113.61524 * 107.50411 * 15 14 12 18 18 C 1.53779 * 87.08045 * 89.11591 * 17 15 14 19 19 H 1.09006 * 113.61307 * 270.88660 * 18 17 15 20 20 C 1.50701 * 113.61419 * 139.98099 * 18 17 15 21 21 C 1.38462 * 119.98575 * 142.50044 * 20 18 17 22 22 F 1.35097 * 120.01253 * 0.02615 * 21 20 18 23 23 C 1.38444 * 119.97276 * 179.97438 * 21 20 18 24 24 C 1.38396 * 119.94958 * 0.02562 * 23 21 20 25 25 F 1.35098 * 120.01287 * 179.97438 * 24 23 21 26 26 C 1.38495 * 119.97484 * 359.97438 * 24 23 21 27 27 C 1.38188 * 120.02828 * 359.72659 * 26 24 23 28 28 C 1.53779 * 87.08402 * 25.43458 * 18 17 15 29 29 C 1.38724 * 119.88847 * 0.26473 * 7 6 5 30 30 C 1.38151 * 119.94523 * 359.48053 * 29 7 6 31 31 H 0.96700 * 113.99806 * 300.00441 * 1 2 3 32 32 H 1.09009 * 109.47208 * 239.99321 * 2 1 3 33 33 H 1.48503 * 109.99937 * 299.99601 * 3 2 1 34 34 H 1.48498 * 110.00022 * 61.31962 * 3 2 1 35 35 H 1.08000 * 119.97159 * 359.97438 * 5 4 2 36 36 H 1.08001 * 120.02144 * 179.97438 * 6 5 4 37 37 H 0.96998 * 119.99607 * 0.02562 * 14 12 9 38 38 H 1.09002 * 113.61478 * 203.66556 * 17 15 14 39 39 H 1.09004 * 113.61162 * 334.56734 * 17 15 14 40 40 H 1.07990 * 120.02232 * 179.97438 * 23 21 20 41 41 H 1.08003 * 119.98627 * 180.02562 * 26 24 23 42 42 H 1.07995 * 119.97812 * 180.29550 * 27 26 24 43 43 H 1.08997 * 113.61646 * 220.02209 * 28 18 17 44 44 H 1.08998 * 113.69354 * 89.12517 * 28 18 17 45 45 H 1.08000 * 120.03327 * 179.72262 * 29 7 6 46 46 H 1.08002 * 119.97546 * 180.27200 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6839 -2.0605 1.3972 6 6 2.1429 -2.7139 2.5246 7 6 2.8522 -2.0142 3.4899 8 8 3.3052 -2.6549 4.5996 9 6 4.0284 -1.8716 5.5510 10 9 3.2116 -0.8377 6.0211 11 9 5.1640 -1.3282 4.9409 12 6 4.4473 -2.7446 6.7058 13 8 4.1557 -3.9218 6.7129 14 7 5.1469 -2.2175 7.7300 15 6 5.5546 -3.0664 8.8523 16 1 4.9240 -3.9478 8.9686 17 6 7.0602 -3.3790 8.8730 18 6 7.2344 -2.0996 9.7082 19 1 7.3902 -1.2037 9.1072 20 6 8.2373 -2.2391 10.8243 21 6 9.0697 -1.1796 11.1432 22 9 8.9824 -0.0207 10.4543 23 6 9.9906 -1.3078 12.1689 24 6 10.0784 -2.4954 12.8741 25 9 10.9770 -2.6222 13.8749 26 6 9.2448 -3.5539 12.5533 27 6 8.3217 -3.4227 11.5334 28 6 5.7775 -2.2913 10.1617 29 6 3.0939 -0.6585 3.3231 30 6 2.6373 -0.0107 2.1915 31 1 -0.3933 0.4418 0.7650 32 1 1.7923 -0.5140 -0.8900 33 1 1.5616 2.4678 -1.2086 34 1 1.5879 2.4585 1.2242 35 1 1.1306 -2.6045 0.6460 36 1 1.9489 -3.7684 2.6545 37 1 5.3805 -1.2761 7.7241 38 1 7.3092 -4.2915 9.4149 39 1 7.5305 -3.3269 7.8911 40 1 10.6404 -0.4821 12.4180 41 1 9.3129 -4.4806 13.1038 42 1 7.6688 -4.2469 11.2871 43 1 5.2124 -1.3612 10.2201 44 1 5.6744 -2.9061 11.0559 45 1 3.6419 -0.1105 4.0753 46 1 2.8291 1.0439 2.0590 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:19 Heat of formation + Delta-G solvation = -197.103570 kcal Electronic energy + Delta-G solvation = -38235.468901 eV Core-core repulsion = 32365.326762 eV Total energy + Delta-G solvation = -5870.142139 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.113 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -50.84805 -50.11618 -50.05223 -48.82425 -41.91398 -41.32256 -40.51852 -39.34626 -38.86019 -37.34484 -35.08453 -32.43153 -32.12104 -31.99980 -31.68700 -29.08403 -27.07856 -26.64717 -26.06062 -24.66785 -24.29943 -23.21093 -22.77511 -22.42139 -20.71749 -20.61140 -19.81524 -19.63804 -19.35912 -18.65090 -18.32236 -17.87784 -17.42955 -17.15412 -17.08880 -16.98051 -16.74347 -16.64493 -16.40657 -16.36592 -16.23512 -15.86104 -15.74281 -15.58162 -15.42587 -15.37337 -15.35961 -15.27483 -15.06344 -15.00660 -14.37584 -14.35337 -14.25174 -14.16606 -14.04080 -13.79996 -13.65416 -13.51220 -13.03841 -12.99103 -12.73201 -12.39892 -12.33989 -12.22894 -12.03763 -11.71974 -11.63416 -11.52289 -10.64433 -10.62676 -10.23131 -10.16054 -9.72405 -9.55566 -5.00154 -0.24993 -0.16698 0.05966 0.17936 0.44985 0.65802 1.23816 1.54685 1.72409 1.92428 1.98606 2.13317 2.47851 2.67907 2.72191 3.01791 3.21330 3.26025 3.30162 3.32686 3.34087 3.44005 3.53576 3.56922 3.64756 3.72347 3.72371 3.81626 3.97195 4.09638 4.19839 4.25007 4.38553 4.39536 4.43604 4.47179 4.54051 4.62476 4.65264 4.70378 4.73458 4.77690 4.81908 4.89287 4.92710 4.97183 5.07311 5.17340 5.36136 5.39660 5.59038 5.71520 5.87320 6.35376 6.36214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.072 4.072 3 Si 0.683 3.317 4 C -0.140 4.140 5 C -0.055 4.055 6 C -0.126 4.126 7 C 0.107 3.893 8 O -0.286 6.286 9 C 0.432 3.568 10 F -0.175 7.175 11 F -0.173 7.173 12 C 0.520 3.480 13 O -0.465 6.465 14 N -0.688 5.688 15 C 0.117 3.883 16 H 0.117 0.883 17 C -0.142 4.142 18 C -0.077 4.077 19 H 0.106 0.894 20 C -0.117 4.117 21 C 0.135 3.865 22 F -0.128 7.128 23 C -0.190 4.190 24 C 0.129 3.871 25 F -0.129 7.129 26 C -0.159 4.159 27 C -0.060 4.060 28 C -0.132 4.132 29 C -0.187 4.187 30 C -0.079 4.079 31 H 0.376 0.624 32 H 0.120 0.880 33 H -0.255 1.255 34 H -0.260 1.260 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.411 0.589 38 H 0.104 0.896 39 H 0.082 0.918 40 H 0.150 0.850 41 H 0.145 0.855 42 H 0.146 0.854 43 H 0.083 0.917 44 H 0.107 0.893 45 H 0.136 0.864 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.102 0.488 2.014 2.952 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.181 4.181 3 Si 0.585 3.415 4 C -0.141 4.141 5 C -0.073 4.073 6 C -0.144 4.144 7 C 0.064 3.936 8 O -0.202 6.202 9 C 0.354 3.646 10 F -0.156 7.156 11 F -0.155 7.155 12 C 0.298 3.702 13 O -0.334 6.334 14 N -0.342 5.342 15 C 0.013 3.987 16 H 0.135 0.865 17 C -0.180 4.180 18 C -0.095 4.095 19 H 0.124 0.876 20 C -0.118 4.118 21 C 0.115 3.885 22 F -0.107 7.107 23 C -0.209 4.209 24 C 0.109 3.891 25 F -0.108 7.108 26 C -0.178 4.178 27 C -0.078 4.078 28 C -0.170 4.170 29 C -0.205 4.205 30 C -0.096 4.096 31 H 0.224 0.776 32 H 0.138 0.862 33 H -0.180 1.180 34 H -0.185 1.185 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.247 0.753 38 H 0.122 0.878 39 H 0.100 0.900 40 H 0.167 0.833 41 H 0.163 0.837 42 H 0.164 0.836 43 H 0.102 0.898 44 H 0.125 0.875 45 H 0.154 0.846 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.771 0.021 1.521 2.335 hybrid contribution -0.508 1.031 0.678 1.334 sum 1.262 1.052 2.199 2.745 Atomic orbital electron populations 1.86609 1.17615 1.79943 1.49348 1.24982 0.84001 1.10917 0.98248 0.94996 0.91664 0.74555 0.80309 1.20309 1.01231 0.95055 0.97456 1.20904 0.96690 0.93504 0.96229 1.20539 0.99897 1.01128 0.92883 1.18982 0.96657 0.91581 0.86380 1.86669 1.67923 1.36250 1.29370 1.21789 0.76576 0.79524 0.86681 1.93196 1.73210 1.60632 1.88569 1.93201 1.51453 1.86590 1.84233 1.19291 0.80369 0.87947 0.82616 1.90880 1.52034 1.14267 1.76262 1.45458 1.54770 1.14065 1.19884 1.22053 0.96810 0.94862 0.84968 0.86515 1.23613 0.95185 0.97813 1.01375 1.21590 0.93001 1.00184 0.94722 0.87617 1.19742 0.98719 0.93555 0.99744 1.17138 0.96707 0.82382 0.92255 1.91533 1.95262 1.46191 1.77668 1.21092 1.02371 0.99291 0.98177 1.17350 0.89875 0.94259 0.87571 1.91564 1.65179 1.96246 1.57797 1.21263 0.97060 0.99259 1.00190 1.20766 0.97006 0.96692 0.93299 1.23468 0.94799 1.01783 0.96979 1.21465 1.05125 0.93061 1.00849 1.20856 0.96375 0.99725 0.92668 0.77596 0.86194 1.18024 1.18485 0.84244 0.84112 0.75294 0.87802 0.89951 0.83261 0.83699 0.83639 0.89787 0.87465 0.84650 0.84808 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.50 12.83 -35.23 -0.45 -0.95 16 2 C -0.07 0.04 2.80 36.01 0.10 0.14 16 3 Si 0.68 -0.77 29.88 -169.99 -5.08 -5.85 16 4 C -0.14 -0.01 5.35 -104.60 -0.56 -0.57 16 5 C -0.06 -0.02 9.68 -39.61 -0.38 -0.40 16 6 C -0.13 -0.16 9.99 -39.43 -0.39 -0.55 16 7 C 0.11 0.25 6.48 -39.22 -0.25 -0.01 16 8 O -0.29 -0.89 9.60 -39.35 -0.38 -1.26 16 9 C 0.43 0.50 2.05 36.01 0.07 0.57 16 10 F -0.17 -0.11 15.27 2.25 0.03 -0.08 16 11 F -0.17 -0.08 15.31 2.25 0.03 -0.05 16 12 C 0.52 0.49 7.34 -10.98 -0.08 0.41 16 13 O -0.46 -1.92 16.10 -14.35 -0.23 -2.15 16 14 N -0.69 1.57 5.26 -53.01 -0.28 1.29 16 15 C 0.12 -0.37 4.32 -67.12 -0.29 -0.66 16 16 H 0.12 -0.27 7.47 -51.93 -0.39 -0.65 16 17 C -0.14 0.51 7.25 -25.92 -0.19 0.32 16 18 C -0.08 0.27 3.78 -90.96 -0.34 -0.08 16 19 H 0.11 -0.35 7.45 -51.93 -0.39 -0.74 16 20 C -0.12 0.25 5.30 -104.54 -0.55 -0.31 16 21 C 0.13 -0.06 7.25 -39.42 -0.29 -0.35 16 22 F -0.13 -0.06 16.36 2.25 0.04 -0.02 16 23 C -0.19 0.07 10.01 -39.45 -0.39 -0.32 16 24 C 0.13 -0.03 7.30 -39.43 -0.29 -0.31 16 25 F -0.13 -0.16 17.27 2.25 0.04 -0.13 16 26 C -0.16 0.32 10.02 -39.50 -0.40 -0.08 16 27 C -0.06 0.18 8.59 -39.60 -0.34 -0.16 16 28 C -0.13 0.58 7.29 -25.92 -0.19 0.39 16 29 C -0.19 -0.22 8.26 -39.43 -0.33 -0.55 16 30 C -0.08 -0.01 8.66 -39.60 -0.34 -0.35 16 31 H 0.38 -0.66 8.70 45.56 0.40 -0.26 16 32 H 0.12 -0.17 7.96 -51.92 -0.41 -0.58 16 33 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 34 H -0.26 -0.19 7.00 56.52 0.40 0.21 16 35 H 0.14 -0.12 8.06 -52.49 -0.42 -0.54 16 36 H 0.14 0.02 8.06 -52.49 -0.42 -0.41 16 37 H 0.41 -1.79 8.70 -40.82 -0.36 -2.15 16 38 H 0.10 -0.49 6.32 -51.93 -0.33 -0.81 16 39 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.15 -0.19 8.06 -52.49 -0.42 -0.62 16 41 H 0.15 -0.52 8.06 -52.48 -0.42 -0.94 16 42 H 0.15 -0.80 6.67 -52.49 -0.35 -1.15 16 43 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 44 H 0.11 -0.55 7.72 -51.93 -0.40 -0.95 16 45 H 0.14 0.05 5.10 -52.49 -0.27 -0.22 16 46 H 0.13 -0.23 4.83 -52.49 -0.25 -0.48 16 LS Contribution 403.16 15.07 6.08 6.08 Total: 0.00 -7.77 403.16 -10.12 -17.89 By element: Atomic # 1 Polarization: -7.41 SS G_CDS: -4.49 Total: -11.90 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -5.43 Total: -2.87 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -0.28 Total: 1.29 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -1.06 Total: -4.37 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.14 Total: -0.27 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.08 Total: -5.85 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -7.77 -10.12 -17.89 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -179.216 kcal (2) G-P(sol) polarization free energy of solvation -7.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.982 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.888 kcal (6) G-S(sol) free energy of system = (1) + (5) -197.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds