Wall clock time and date at job start Sun Mar 7 2021 00:09:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86295 * 109.47387 * 2 1 4 4 C 1.50704 * 109.47194 * 120.00312 * 2 1 3 5 5 C 1.38264 * 119.94536 * 64.99163 * 4 2 1 6 6 C 1.38147 * 120.05256 * 180.02562 * 5 4 2 7 7 C 1.38729 * 119.94632 * 0.02562 * 6 5 4 8 8 O 1.35903 * 120.05601 * 180.02562 * 7 6 5 9 9 C 1.42896 * 116.99812 * 179.97438 * 8 7 6 10 10 F 1.39896 * 109.47093 * 60.00225 * 9 8 7 11 11 F 1.39899 * 109.47312 * 299.99278 * 9 8 7 12 12 C 1.50704 * 109.47006 * 179.97438 * 9 8 7 13 13 O 1.21280 * 119.99905 * 0.02562 * 12 9 8 14 14 N 1.34776 * 120.00197 * 179.97438 * 12 9 8 15 15 C 1.46496 * 120.00015 * 180.02562 * 14 12 9 16 16 H 1.09004 * 112.90889 * 336.25053 * 15 14 12 17 17 C 1.53784 * 113.61524 * 107.50411 * 15 14 12 18 18 C 1.53779 * 87.08045 * 89.11591 * 17 15 14 19 19 H 1.09006 * 113.61307 * 270.88660 * 18 17 15 20 20 C 1.50701 * 113.61419 * 139.98099 * 18 17 15 21 21 C 1.38462 * 119.98575 * 142.50044 * 20 18 17 22 22 F 1.35097 * 120.01253 * 0.02615 * 21 20 18 23 23 C 1.38444 * 119.97276 * 179.97438 * 21 20 18 24 24 C 1.38396 * 119.94958 * 0.02562 * 23 21 20 25 25 F 1.35098 * 120.01287 * 179.97438 * 24 23 21 26 26 C 1.38495 * 119.97484 * 359.97438 * 24 23 21 27 27 C 1.38188 * 120.02828 * 359.72659 * 26 24 23 28 28 C 1.53779 * 87.08402 * 25.43458 * 18 17 15 29 29 C 1.38724 * 119.88847 * 0.26473 * 7 6 5 30 30 C 1.38151 * 119.94523 * 359.48053 * 29 7 6 31 31 H 0.96700 * 113.99806 * 300.00441 * 1 2 3 32 32 H 1.09009 * 109.47208 * 239.99321 * 2 1 3 33 33 H 1.48503 * 109.99937 * 299.99601 * 3 2 1 34 34 H 1.48498 * 110.00022 * 61.31962 * 3 2 1 35 35 H 1.08000 * 119.97159 * 359.97438 * 5 4 2 36 36 H 1.08001 * 120.02144 * 179.97438 * 6 5 4 37 37 H 0.96998 * 119.99607 * 0.02562 * 14 12 9 38 38 H 1.09002 * 113.61478 * 203.66556 * 17 15 14 39 39 H 1.09004 * 113.61162 * 334.56734 * 17 15 14 40 40 H 1.07990 * 120.02232 * 179.97438 * 23 21 20 41 41 H 1.08003 * 119.98627 * 180.02562 * 26 24 23 42 42 H 1.07995 * 119.97812 * 180.29550 * 27 26 24 43 43 H 1.08997 * 113.61646 * 220.02209 * 28 18 17 44 44 H 1.08998 * 113.69354 * 89.12517 * 28 18 17 45 45 H 1.08000 * 120.03327 * 179.72262 * 29 7 6 46 46 H 1.08002 * 119.97546 * 180.27200 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6839 -2.0605 1.3972 6 6 2.1429 -2.7139 2.5246 7 6 2.8522 -2.0142 3.4899 8 8 3.3052 -2.6549 4.5996 9 6 4.0284 -1.8716 5.5510 10 9 3.2116 -0.8377 6.0211 11 9 5.1640 -1.3282 4.9409 12 6 4.4473 -2.7446 6.7058 13 8 4.1557 -3.9218 6.7129 14 7 5.1469 -2.2175 7.7300 15 6 5.5546 -3.0664 8.8523 16 1 4.9240 -3.9478 8.9686 17 6 7.0602 -3.3790 8.8730 18 6 7.2344 -2.0996 9.7082 19 1 7.3902 -1.2037 9.1072 20 6 8.2373 -2.2391 10.8243 21 6 9.0697 -1.1796 11.1432 22 9 8.9824 -0.0207 10.4543 23 6 9.9906 -1.3078 12.1689 24 6 10.0784 -2.4954 12.8741 25 9 10.9770 -2.6222 13.8749 26 6 9.2448 -3.5539 12.5533 27 6 8.3217 -3.4227 11.5334 28 6 5.7775 -2.2913 10.1617 29 6 3.0939 -0.6585 3.3231 30 6 2.6373 -0.0107 2.1915 31 1 -0.3933 0.4418 0.7650 32 1 1.7923 -0.5140 -0.8900 33 1 1.5616 2.4678 -1.2086 34 1 1.5879 2.4585 1.2242 35 1 1.1306 -2.6045 0.6460 36 1 1.9489 -3.7684 2.6545 37 1 5.3805 -1.2761 7.7241 38 1 7.3092 -4.2915 9.4149 39 1 7.5305 -3.3269 7.8911 40 1 10.6404 -0.4821 12.4180 41 1 9.3129 -4.4806 13.1038 42 1 7.6688 -4.2469 11.2871 43 1 5.2124 -1.3612 10.2201 44 1 5.6744 -2.9061 11.0559 45 1 3.6419 -0.1105 4.0753 46 1 2.8291 1.0439 2.0590 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:18 Heat of formation + Delta-G solvation = -192.053027 kcal Electronic energy + Delta-G solvation = -38235.249893 eV Core-core repulsion = 32365.326762 eV Total energy + Delta-G solvation = -5869.923131 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.113 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -50.90836 -50.07263 -50.04079 -48.87956 -41.80116 -41.36406 -40.47043 -39.36171 -38.76664 -37.37675 -35.03060 -32.45859 -32.09473 -31.90734 -31.55342 -29.10549 -26.77165 -26.57568 -25.97509 -24.63384 -24.20364 -23.12641 -22.73337 -22.44039 -20.67452 -20.54606 -19.77639 -19.70595 -19.28414 -18.66101 -18.22315 -17.85358 -17.43498 -17.05379 -17.03238 -16.90288 -16.68618 -16.59284 -16.42250 -16.36460 -16.22781 -15.88818 -15.76531 -15.52527 -15.43042 -15.37878 -15.27975 -15.21978 -15.12209 -14.92656 -14.41708 -14.39696 -14.22826 -14.06724 -13.83101 -13.58201 -13.55527 -13.47535 -13.03736 -12.90391 -12.56891 -12.44145 -12.25429 -12.13227 -11.82795 -11.75417 -11.57022 -11.38430 -10.63914 -10.50658 -10.18887 -10.09327 -9.61330 -9.59783 -4.93323 -0.12353 -0.02529 0.00917 0.15217 0.44096 0.60633 1.29309 1.57810 1.66231 1.94335 1.97934 2.28585 2.44475 2.73631 2.83110 3.20273 3.25264 3.39914 3.42883 3.47761 3.53256 3.55818 3.64523 3.65239 3.71044 3.82654 3.92549 4.05926 4.08874 4.15380 4.19885 4.39115 4.45980 4.58819 4.64852 4.68028 4.73731 4.82706 4.83393 4.85967 4.89864 4.91195 4.98728 5.00705 5.03995 5.08155 5.15805 5.33922 5.36895 5.42300 5.73311 5.80082 5.84453 6.42824 6.47262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.077 4.077 3 Si 0.761 3.239 4 C -0.138 4.138 5 C -0.057 4.057 6 C -0.135 4.135 7 C 0.086 3.914 8 O -0.304 6.304 9 C 0.433 3.567 10 F -0.172 7.172 11 F -0.170 7.170 12 C 0.521 3.479 13 O -0.503 6.503 14 N -0.672 5.672 15 C 0.110 3.890 16 H 0.111 0.889 17 C -0.137 4.137 18 C -0.077 4.077 19 H 0.103 0.897 20 C -0.111 4.111 21 C 0.116 3.884 22 F -0.138 7.138 23 C -0.200 4.200 24 C 0.107 3.893 25 F -0.143 7.143 26 C -0.155 4.155 27 C -0.054 4.054 28 C -0.121 4.121 29 C -0.194 4.194 30 C -0.079 4.079 31 H 0.386 0.614 32 H 0.131 0.869 33 H -0.301 1.301 34 H -0.282 1.282 35 H 0.151 0.849 36 H 0.146 0.854 37 H 0.422 0.578 38 H 0.120 0.880 39 H 0.073 0.927 40 H 0.149 0.851 41 H 0.162 0.838 42 H 0.176 0.824 43 H 0.088 0.912 44 H 0.122 0.878 45 H 0.141 0.859 46 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.854 0.206 2.132 2.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.186 4.186 3 Si 0.666 3.334 4 C -0.139 4.139 5 C -0.075 4.075 6 C -0.154 4.154 7 C 0.044 3.956 8 O -0.221 6.221 9 C 0.355 3.645 10 F -0.154 7.154 11 F -0.151 7.151 12 C 0.299 3.701 13 O -0.376 6.376 14 N -0.325 5.325 15 C 0.006 3.994 16 H 0.129 0.871 17 C -0.175 4.175 18 C -0.095 4.095 19 H 0.121 0.879 20 C -0.112 4.112 21 C 0.096 3.904 22 F -0.117 7.117 23 C -0.220 4.220 24 C 0.087 3.913 25 F -0.122 7.122 26 C -0.173 4.173 27 C -0.071 4.071 28 C -0.158 4.158 29 C -0.212 4.212 30 C -0.097 4.097 31 H 0.236 0.764 32 H 0.148 0.852 33 H -0.229 1.229 34 H -0.208 1.208 35 H 0.169 0.831 36 H 0.164 0.836 37 H 0.260 0.740 38 H 0.138 0.862 39 H 0.092 0.908 40 H 0.166 0.834 41 H 0.180 0.820 42 H 0.193 0.807 43 H 0.107 0.893 44 H 0.140 0.860 45 H 0.158 0.842 46 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.549 -0.242 1.670 2.291 hybrid contribution -0.453 1.160 0.617 1.390 sum 1.096 0.917 2.287 2.697 Atomic orbital electron populations 1.86583 1.18371 1.80321 1.50189 1.25162 0.83465 1.11563 0.98408 0.94106 0.90416 0.72330 0.76518 1.20407 1.00900 0.95004 0.97576 1.21077 0.96497 0.93790 0.96128 1.20714 0.99996 1.01565 0.93089 1.19241 0.97549 0.92239 0.86613 1.86643 1.68345 1.37198 1.29912 1.21800 0.76540 0.79557 0.86558 1.93194 1.73199 1.60492 1.88495 1.93201 1.51207 1.86524 1.84217 1.19324 0.80392 0.87424 0.82934 1.90858 1.53955 1.15670 1.77123 1.45473 1.53162 1.14753 1.19101 1.22191 0.97082 0.94923 0.85157 0.87085 1.23637 0.94363 0.98372 1.01107 1.21608 0.93261 1.00246 0.94388 0.87875 1.19938 0.98200 0.93289 0.99773 1.17333 0.97614 0.82719 0.92708 1.91503 1.95405 1.46837 1.77906 1.21164 1.02714 0.99532 0.98544 1.17597 0.90654 0.95099 0.87926 1.91524 1.65844 1.96353 1.58469 1.21534 0.96351 0.99242 1.00220 1.21098 0.96735 0.97005 0.92290 1.23466 0.93733 1.02016 0.96614 1.21595 1.05377 0.92804 1.01436 1.21057 0.95926 1.00526 0.92178 0.76447 0.85159 1.22926 1.20818 0.83119 0.83643 0.74016 0.86204 0.90845 0.83362 0.82013 0.80673 0.89325 0.85964 0.84162 0.83109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.80 12.83 -148.98 -1.91 -2.71 16 2 C -0.08 0.13 2.80 71.24 0.20 0.33 16 3 Si 0.76 -2.03 29.88 68.60 2.05 0.02 16 4 C -0.14 0.04 5.35 -19.85 -0.11 -0.06 16 5 C -0.06 -0.04 9.68 22.25 0.22 0.18 16 6 C -0.14 -0.42 9.99 22.37 0.22 -0.19 16 7 C 0.09 0.46 6.48 22.50 0.15 0.61 16 8 O -0.30 -2.24 9.60 -73.42 -0.71 -2.94 16 9 C 0.43 1.28 2.05 71.24 0.15 1.42 16 10 F -0.17 -0.28 15.27 44.97 0.69 0.41 16 11 F -0.17 -0.22 15.31 44.97 0.69 0.47 16 12 C 0.52 1.27 7.34 87.66 0.64 1.92 16 13 O -0.50 -4.69 16.10 16.01 0.26 -4.43 16 14 N -0.67 3.20 5.26 -440.02 -2.32 0.89 16 15 C 0.11 -0.78 4.32 45.52 0.20 -0.58 16 16 H 0.11 -0.57 7.47 -2.39 -0.02 -0.58 16 17 C -0.14 1.14 7.25 31.12 0.23 1.37 16 18 C -0.08 0.61 3.78 -11.01 -0.04 0.57 16 19 H 0.10 -0.74 7.45 -2.38 -0.02 -0.76 16 20 C -0.11 0.56 5.30 -19.81 -0.10 0.46 16 21 C 0.12 -0.06 7.25 22.37 0.16 0.10 16 22 F -0.14 -0.23 16.36 44.97 0.74 0.50 16 23 C -0.20 -0.06 10.01 22.36 0.22 0.17 16 24 C 0.11 0.01 7.30 22.37 0.16 0.18 16 25 F -0.14 -0.51 17.27 44.97 0.78 0.27 16 26 C -0.15 0.76 10.02 22.32 0.22 0.98 16 27 C -0.05 0.42 8.59 22.26 0.19 0.61 16 28 C -0.12 1.24 7.29 31.12 0.23 1.47 16 29 C -0.19 -0.49 8.26 22.37 0.18 -0.31 16 30 C -0.08 0.03 8.66 22.26 0.19 0.22 16 31 H 0.39 -1.47 8.70 -74.06 -0.64 -2.12 16 32 H 0.13 -0.50 7.96 -2.38 -0.02 -0.52 16 33 H -0.30 -1.54 7.11 99.48 0.71 -0.84 16 34 H -0.28 -0.26 7.00 99.48 0.70 0.44 16 35 H 0.15 -0.32 8.06 -2.91 -0.02 -0.34 16 36 H 0.15 0.17 8.06 -2.91 -0.02 0.15 16 37 H 0.42 -3.86 8.70 -92.71 -0.81 -4.67 16 38 H 0.12 -1.38 6.32 -2.39 -0.02 -1.39 16 39 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 40 H 0.15 -0.11 8.06 -2.92 -0.02 -0.14 16 41 H 0.16 -1.40 8.06 -2.91 -0.02 -1.42 16 42 H 0.18 -2.47 6.67 -2.91 -0.02 -2.49 16 43 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 44 H 0.12 -1.56 7.72 -2.39 -0.02 -1.58 16 45 H 0.14 0.11 5.10 -2.91 -0.01 0.10 16 46 H 0.15 -0.67 4.83 -2.91 -0.01 -0.68 16 Total: 0.00 -19.62 403.16 3.26 -16.36 By element: Atomic # 1 Polarization: -17.93 SS G_CDS: -0.32 Total: -18.25 kcal Atomic # 6 Polarization: 6.11 SS G_CDS: 3.31 Total: 9.42 kcal Atomic # 7 Polarization: 3.20 SS G_CDS: -2.32 Total: 0.89 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -2.36 Total: -10.08 kcal Atomic # 9 Polarization: -1.25 SS G_CDS: 2.89 Total: 1.64 kcal Atomic # 14 Polarization: -2.03 SS G_CDS: 2.05 Total: 0.02 kcal Total: -19.62 3.26 -16.36 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -175.695 kcal (2) G-P(sol) polarization free energy of solvation -19.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -195.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.258 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.053 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds