Wall clock time and date at job start Sun Mar 7 2021 00:09:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.38242 * 119.97270 * 119.99770 * 4 2 1 6 6 C 1.38286 * 120.11575 * 180.02562 * 5 4 2 7 7 C 1.38120 * 120.05268 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94749 * 359.97438 * 7 6 5 9 9 O 1.35896 * 120.06100 * 180.02562 * 8 7 6 10 10 C 1.42900 * 116.99604 * 359.97438 * 9 8 7 11 11 C 1.50701 * 109.46927 * 180.02562 * 10 9 8 12 12 O 1.21277 * 120.00363 * 0.02562 * 11 10 9 13 13 N 1.34780 * 120.00219 * 180.02562 * 11 10 9 14 14 C 1.46492 * 120.00488 * 180.02562 * 13 11 10 15 15 H 1.09005 * 112.84734 * 25.33281 * 14 13 11 16 16 C 1.53784 * 113.61641 * 156.52879 * 14 13 11 17 17 C 1.53783 * 87.08083 * 89.11939 * 16 14 13 18 18 H 1.09004 * 113.61041 * 270.80210 * 17 16 14 19 19 C 1.50696 * 113.61464 * 139.98136 * 17 16 14 20 20 C 1.38449 * 119.98387 * 119.72397 * 19 17 16 21 21 F 1.35102 * 120.01728 * 0.02562 * 20 19 17 22 22 C 1.38445 * 119.97235 * 179.74967 * 20 19 17 23 23 C 1.38393 * 119.94833 * 0.54528 * 22 20 19 24 24 F 1.35103 * 120.01528 * 179.68307 * 23 22 20 25 25 C 1.38502 * 119.97824 * 359.70730 * 23 22 20 26 26 C 1.38183 * 120.01901 * 0.02562 * 25 23 22 27 27 C 1.53775 * 113.61766 * 254.13914 * 14 13 11 28 28 C 1.38162 * 119.97359 * 299.73159 * 4 2 1 29 29 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 30 30 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 31 31 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 32 32 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 33 33 H 1.08005 * 119.93980 * 359.97438 * 5 4 2 34 34 H 1.08001 * 119.97532 * 179.97438 * 6 5 4 35 35 H 1.07997 * 120.02750 * 180.02562 * 7 6 5 36 36 H 1.08993 * 109.47490 * 300.00602 * 10 9 8 37 37 H 1.09004 * 109.46718 * 60.00783 * 10 9 8 38 38 H 0.97010 * 119.99587 * 0.02562 * 13 11 10 39 39 H 1.09003 * 113.61467 * 203.66662 * 16 14 13 40 40 H 1.08996 * 113.61092 * 334.56658 * 16 14 13 41 41 H 1.07998 * 120.02583 * 180.25300 * 22 20 19 42 42 H 1.07995 * 119.98931 * 179.97438 * 25 23 22 43 43 H 1.08007 * 119.97460 * 179.97438 * 26 25 23 44 44 H 1.09005 * 113.61341 * 25.42637 * 27 14 13 45 45 H 1.08999 * 113.62144 * 156.33450 * 27 14 13 46 46 H 1.08003 * 120.02839 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.7263 -0.0382 -2.1399 6 6 3.1885 -0.6872 -3.2702 7 6 2.8566 -2.0092 -3.4931 8 6 2.0591 -2.6863 -2.5817 9 8 1.7315 -3.9873 -2.7985 10 6 2.2426 -4.5956 -3.9862 11 6 1.7784 -6.0277 -4.0568 12 8 1.0785 -6.4824 -3.1769 13 7 2.1412 -6.8032 -5.0977 14 6 1.6896 -8.1950 -5.1667 15 1 0.7645 -8.3676 -4.6165 16 6 1.6734 -8.7675 -6.5939 17 6 3.1306 -9.1964 -6.3540 18 1 3.8607 -8.4350 -6.6286 19 6 3.4608 -10.5543 -6.9178 20 6 4.4488 -10.6827 -7.8792 21 9 5.1171 -9.5911 -8.3115 22 6 4.7556 -11.9311 -8.3933 23 6 4.0663 -13.0477 -7.9536 24 9 4.3602 -14.2657 -8.4591 25 6 3.0747 -12.9162 -6.9956 26 6 2.7733 -11.6704 -6.4792 27 6 2.7939 -9.2174 -4.8508 28 6 1.6021 -2.0349 -1.4454 29 1 -0.3934 0.4417 0.7649 30 1 1.7923 -0.5138 0.8901 31 1 3.5346 1.7703 0.0322 32 1 1.5616 2.4678 -1.2086 33 1 2.9859 0.9960 -1.9679 34 1 3.8089 -0.1596 -3.9795 35 1 3.2181 -2.5158 -4.3757 36 1 1.8784 -4.0526 -4.8583 37 1 3.3321 -4.5669 -3.9691 38 1 2.7014 -6.4396 -5.8013 39 1 0.9871 -9.6048 -6.7208 40 1 1.5636 -8.0078 -7.3678 41 1 5.5289 -12.0328 -9.1403 42 1 2.5365 -13.7874 -6.6527 43 1 1.9996 -11.5686 -5.7325 44 1 3.5883 -8.8207 -4.2185 45 1 2.4135 -10.1775 -4.5020 46 1 0.9844 -2.5609 -0.7325 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:30 Heat of formation + Delta-G solvation = -102.477542 kcal Electronic energy + Delta-G solvation = -32069.365962 eV Core-core repulsion = 27142.235067 eV Total energy + Delta-G solvation = -4927.130895 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -50.09795 -50.03062 -41.82981 -41.29397 -40.25741 -39.12818 -38.50340 -37.27022 -34.74447 -32.62659 -32.12862 -31.87059 -31.43221 -29.32312 -26.97055 -26.84560 -26.17910 -24.40766 -23.71573 -23.21114 -22.59666 -21.63519 -20.45262 -19.42085 -19.20795 -18.45939 -18.40010 -18.17816 -17.66106 -17.51475 -17.35453 -17.07011 -16.96528 -16.76943 -16.62108 -16.36449 -15.87377 -15.75094 -15.54672 -15.51449 -15.28539 -15.15468 -14.69099 -14.57497 -14.24306 -14.17120 -13.95297 -13.78729 -13.74033 -13.63398 -13.54592 -13.21020 -12.93434 -12.68746 -12.40039 -12.25277 -12.19378 -12.12454 -11.91200 -11.80663 -11.50904 -10.97425 -10.41831 -10.29333 -10.19192 -9.89721 -9.68930 -9.30365 -4.97811 -0.21912 -0.14181 0.16427 0.35947 1.22448 1.37973 1.39967 1.63189 1.96303 2.16484 2.46316 2.60530 2.74412 3.12639 3.30995 3.32673 3.35308 3.37485 3.45889 3.50047 3.65727 3.69902 3.75732 3.76433 3.85047 3.85501 3.88599 3.94582 4.02530 4.16203 4.22528 4.40384 4.47784 4.48093 4.55835 4.57813 4.62492 4.67544 4.72659 4.78846 4.81024 4.89060 4.92979 4.93677 5.09974 5.17835 5.29457 5.36787 5.40872 5.59263 5.61745 6.16778 6.31880 6.61604 7.01019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.689 3.311 4 C -0.035 4.035 5 C -0.161 4.161 6 C -0.071 4.071 7 C -0.207 4.207 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.040 3.960 11 C 0.520 3.480 12 O -0.508 6.508 13 N -0.712 5.712 14 C 0.122 3.878 15 H 0.109 0.891 16 C -0.134 4.134 17 C -0.075 4.075 18 H 0.104 0.896 19 C -0.115 4.115 20 C 0.133 3.867 21 F -0.129 7.129 22 C -0.190 4.190 23 C 0.128 3.872 24 F -0.130 7.130 25 C -0.159 4.159 26 C -0.060 4.060 27 C -0.142 4.142 28 C -0.116 4.116 29 H 0.384 0.616 30 H 0.078 0.922 31 H -0.255 1.255 32 H -0.250 1.250 33 H 0.120 0.880 34 H 0.131 0.869 35 H 0.132 0.868 36 H 0.096 0.904 37 H 0.096 0.904 38 H 0.403 0.597 39 H 0.102 0.898 40 H 0.080 0.920 41 H 0.149 0.851 42 H 0.145 0.855 43 H 0.146 0.854 44 H 0.078 0.922 45 H 0.099 0.901 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.013 1.972 -0.085 2.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.035 4.035 5 C -0.179 4.179 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.086 3.914 9 O -0.199 6.199 10 C -0.039 4.039 11 C 0.304 3.696 12 O -0.381 6.381 13 N -0.365 5.365 14 C 0.017 3.983 15 H 0.127 0.873 16 C -0.171 4.171 17 C -0.094 4.094 18 H 0.122 0.878 19 C -0.117 4.117 20 C 0.114 3.886 21 F -0.107 7.107 22 C -0.209 4.209 23 C 0.108 3.892 24 F -0.108 7.108 25 C -0.178 4.178 26 C -0.078 4.078 27 C -0.181 4.181 28 C -0.135 4.135 29 H 0.231 0.769 30 H 0.096 0.904 31 H -0.180 1.180 32 H -0.175 1.175 33 H 0.138 0.862 34 H 0.149 0.851 35 H 0.149 0.851 36 H 0.114 0.886 37 H 0.113 0.887 38 H 0.238 0.762 39 H 0.121 0.879 40 H 0.099 0.901 41 H 0.167 0.833 42 H 0.163 0.837 43 H 0.164 0.836 44 H 0.097 0.903 45 H 0.117 0.883 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 0.978 1.795 -0.322 2.070 hybrid contribution 0.907 -0.471 -1.140 1.531 sum 1.885 1.324 -1.461 2.728 Atomic orbital electron populations 1.86502 1.16953 1.81871 1.49710 1.24738 0.85962 1.10533 0.97274 0.95297 0.80544 0.77789 0.87395 1.19141 0.96374 0.93068 0.94908 1.20799 1.01834 0.99402 0.95849 1.20847 0.97858 0.93768 0.96417 1.21272 1.03685 0.96506 1.01057 1.19008 0.94750 0.83004 0.94674 1.86168 1.70402 1.22480 1.40864 1.22460 1.00297 0.92139 0.88986 1.20021 0.80578 0.86873 0.82090 1.90792 1.35733 1.74185 1.37381 1.45483 1.54201 1.11768 1.25088 1.21842 0.98753 0.79981 0.97725 0.87252 1.23444 0.95720 1.01566 0.96414 1.21616 0.97874 0.93352 0.96534 0.87804 1.19785 0.97137 0.96809 0.97923 1.17137 0.93042 0.82644 0.95805 1.91527 1.78797 1.52102 1.88311 1.21083 1.04190 0.90809 1.04862 1.17346 0.96370 0.80108 0.95340 1.91563 1.92392 1.41065 1.85797 1.21265 0.98765 0.99579 0.98144 1.20781 0.98401 0.90202 0.98401 1.23639 0.99293 1.00238 0.94922 1.20246 1.02399 0.93815 0.97033 0.76877 0.90426 1.17962 1.17491 0.86224 0.85090 0.85059 0.88642 0.88662 0.76194 0.87924 0.90097 0.83295 0.83713 0.83649 0.90308 0.88285 0.84377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.46 12.75 -35.23 -0.45 -0.91 16 2 C -0.07 -0.04 2.81 36.00 0.10 0.06 16 3 Si 0.69 -0.61 29.79 -169.99 -5.06 -5.68 16 4 C -0.03 -0.10 5.42 -104.65 -0.57 -0.67 16 5 C -0.16 -0.40 8.67 -39.56 -0.34 -0.74 16 6 C -0.07 -0.08 10.04 -39.61 -0.40 -0.48 16 7 C -0.21 -0.20 9.04 -39.44 -0.36 -0.55 16 8 C 0.13 0.40 6.69 -39.21 -0.26 0.14 16 9 O -0.29 -1.01 9.67 -39.32 -0.38 -1.39 16 10 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 11 C 0.52 0.60 7.91 -10.98 -0.09 0.51 16 12 O -0.51 -3.10 16.12 -14.35 -0.23 -3.33 16 13 N -0.71 1.54 5.26 -53.02 -0.28 1.26 16 14 C 0.12 -0.24 4.29 -67.12 -0.29 -0.53 16 15 H 0.11 -0.03 7.50 -51.93 -0.39 -0.42 16 16 C -0.13 0.45 7.29 -25.92 -0.19 0.27 16 17 C -0.08 0.20 3.79 -90.82 -0.34 -0.14 16 18 H 0.10 -0.29 7.45 -51.93 -0.39 -0.67 16 19 C -0.12 0.16 5.30 -104.55 -0.55 -0.39 16 20 C 0.13 0.01 7.24 -39.43 -0.29 -0.28 16 21 F -0.13 -0.11 16.36 2.25 0.04 -0.07 16 22 C -0.19 -0.02 10.01 -39.45 -0.39 -0.42 16 23 C 0.13 0.04 7.30 -39.43 -0.29 -0.25 16 24 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 25 C -0.16 0.21 10.03 -39.50 -0.40 -0.18 16 26 C -0.06 0.14 8.61 -39.60 -0.34 -0.20 16 27 C -0.14 0.34 7.27 -25.78 -0.19 0.16 16 28 C -0.12 -0.43 9.56 -39.43 -0.38 -0.81 16 29 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 30 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 32 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 33 H 0.12 0.21 4.87 -52.48 -0.26 -0.04 16 34 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 35 H 0.13 -0.28 6.30 -52.49 -0.33 -0.61 16 36 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 37 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 38 H 0.40 -2.04 8.70 -40.82 -0.36 -2.39 16 39 H 0.10 -0.40 7.72 -51.93 -0.40 -0.80 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 41 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 42 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 43 H 0.15 -0.65 6.66 -52.48 -0.35 -1.00 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 45 H 0.10 -0.32 6.32 -51.93 -0.33 -0.65 16 46 H 0.14 0.51 8.06 -52.48 -0.42 0.09 16 LS Contribution 393.96 15.07 5.94 5.94 Total: 0.00 -10.67 393.96 -11.10 -21.77 By element: Atomic # 1 Polarization: -7.70 SS G_CDS: -5.34 Total: -13.04 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -5.37 Total: -4.36 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.28 Total: 1.26 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -1.06 Total: -5.63 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.08 Total: -0.25 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.06 Total: -5.68 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -10.67 -11.10 -21.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.707 kcal (2) G-P(sol) polarization free energy of solvation -10.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.377 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.770 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.478 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds