Wall clock time and date at job start Sun Mar 7 2021 00:09:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.38242 * 119.97270 * 119.99770 * 4 2 1 6 6 C 1.38286 * 120.11575 * 180.02562 * 5 4 2 7 7 C 1.38120 * 120.05268 * 0.02562 * 6 5 4 8 8 C 1.38751 * 119.94749 * 359.97438 * 7 6 5 9 9 O 1.35896 * 120.06100 * 180.02562 * 8 7 6 10 10 C 1.42900 * 116.99604 * 359.97438 * 9 8 7 11 11 C 1.50701 * 109.46927 * 180.02562 * 10 9 8 12 12 O 1.21277 * 120.00363 * 0.02562 * 11 10 9 13 13 N 1.34780 * 120.00219 * 180.02562 * 11 10 9 14 14 C 1.46492 * 120.00488 * 180.02562 * 13 11 10 15 15 H 1.09005 * 112.84734 * 25.33281 * 14 13 11 16 16 C 1.53784 * 113.61641 * 156.52879 * 14 13 11 17 17 C 1.53783 * 87.08083 * 89.11939 * 16 14 13 18 18 H 1.09004 * 113.61041 * 270.80210 * 17 16 14 19 19 C 1.50696 * 113.61464 * 139.98136 * 17 16 14 20 20 C 1.38449 * 119.98387 * 119.72397 * 19 17 16 21 21 F 1.35102 * 120.01728 * 0.02562 * 20 19 17 22 22 C 1.38445 * 119.97235 * 179.74967 * 20 19 17 23 23 C 1.38393 * 119.94833 * 0.54528 * 22 20 19 24 24 F 1.35103 * 120.01528 * 179.68307 * 23 22 20 25 25 C 1.38502 * 119.97824 * 359.70730 * 23 22 20 26 26 C 1.38183 * 120.01901 * 0.02562 * 25 23 22 27 27 C 1.53775 * 113.61766 * 254.13914 * 14 13 11 28 28 C 1.38162 * 119.97359 * 299.73159 * 4 2 1 29 29 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 30 30 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 31 31 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 32 32 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 33 33 H 1.08005 * 119.93980 * 359.97438 * 5 4 2 34 34 H 1.08001 * 119.97532 * 179.97438 * 6 5 4 35 35 H 1.07997 * 120.02750 * 180.02562 * 7 6 5 36 36 H 1.08993 * 109.47490 * 300.00602 * 10 9 8 37 37 H 1.09004 * 109.46718 * 60.00783 * 10 9 8 38 38 H 0.97010 * 119.99587 * 0.02562 * 13 11 10 39 39 H 1.09003 * 113.61467 * 203.66662 * 16 14 13 40 40 H 1.08996 * 113.61092 * 334.56658 * 16 14 13 41 41 H 1.07998 * 120.02583 * 180.25300 * 22 20 19 42 42 H 1.07995 * 119.98931 * 179.97438 * 25 23 22 43 43 H 1.08007 * 119.97460 * 179.97438 * 26 25 23 44 44 H 1.09005 * 113.61341 * 25.42637 * 27 14 13 45 45 H 1.08999 * 113.62144 * 156.33450 * 27 14 13 46 46 H 1.08003 * 120.02839 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.7263 -0.0382 -2.1399 6 6 3.1885 -0.6872 -3.2702 7 6 2.8566 -2.0092 -3.4931 8 6 2.0591 -2.6863 -2.5817 9 8 1.7315 -3.9873 -2.7985 10 6 2.2426 -4.5956 -3.9862 11 6 1.7784 -6.0277 -4.0568 12 8 1.0785 -6.4824 -3.1769 13 7 2.1412 -6.8032 -5.0977 14 6 1.6896 -8.1950 -5.1667 15 1 0.7645 -8.3676 -4.6165 16 6 1.6734 -8.7675 -6.5939 17 6 3.1306 -9.1964 -6.3540 18 1 3.8607 -8.4350 -6.6286 19 6 3.4608 -10.5543 -6.9178 20 6 4.4488 -10.6827 -7.8792 21 9 5.1171 -9.5911 -8.3115 22 6 4.7556 -11.9311 -8.3933 23 6 4.0663 -13.0477 -7.9536 24 9 4.3602 -14.2657 -8.4591 25 6 3.0747 -12.9162 -6.9956 26 6 2.7733 -11.6704 -6.4792 27 6 2.7939 -9.2174 -4.8508 28 6 1.6021 -2.0349 -1.4454 29 1 -0.3934 0.4417 0.7649 30 1 1.7923 -0.5138 0.8901 31 1 3.5346 1.7703 0.0322 32 1 1.5616 2.4678 -1.2086 33 1 2.9859 0.9960 -1.9679 34 1 3.8089 -0.1596 -3.9795 35 1 3.2181 -2.5158 -4.3757 36 1 1.8784 -4.0526 -4.8583 37 1 3.3321 -4.5669 -3.9691 38 1 2.7014 -6.4396 -5.8013 39 1 0.9871 -9.6048 -6.7208 40 1 1.5636 -8.0078 -7.3678 41 1 5.5289 -12.0328 -9.1403 42 1 2.5365 -13.7874 -6.6527 43 1 1.9996 -11.5686 -5.7325 44 1 3.5883 -8.8207 -4.2185 45 1 2.4135 -10.1775 -4.5020 46 1 0.9844 -2.5609 -0.7325 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:29 Heat of formation + Delta-G solvation = -101.042673 kcal Electronic energy + Delta-G solvation = -32069.303742 eV Core-core repulsion = 27142.235067 eV Total energy + Delta-G solvation = -4927.068675 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -50.08975 -50.06021 -41.81303 -41.29511 -40.27464 -39.12637 -38.52402 -37.30575 -34.74633 -32.69536 -32.09029 -31.81995 -31.41996 -29.31314 -26.87906 -26.75504 -26.06919 -24.31519 -23.82201 -23.16560 -22.58676 -21.66175 -20.32345 -19.38874 -19.23772 -18.46755 -18.39369 -18.14735 -17.69283 -17.53993 -17.34729 -17.06455 -16.90738 -16.77847 -16.57548 -16.38866 -15.89403 -15.75319 -15.57152 -15.50174 -15.21218 -15.12115 -14.69754 -14.63591 -14.34320 -14.06201 -13.85190 -13.81487 -13.66150 -13.58409 -13.45142 -13.23199 -12.86825 -12.57934 -12.47723 -12.27111 -12.18997 -12.08106 -11.85237 -11.77030 -11.34680 -11.08485 -10.43486 -10.23023 -10.10821 -9.97603 -9.61544 -9.43011 -4.92945 -0.14540 -0.05087 0.06664 0.22256 1.25094 1.36290 1.41623 1.65398 1.96523 2.26215 2.48646 2.51544 2.80500 3.27384 3.36909 3.42517 3.43809 3.48364 3.61357 3.65370 3.71746 3.78435 3.84018 3.85113 3.91026 3.95615 4.02547 4.06139 4.14612 4.15627 4.19878 4.39385 4.54693 4.57474 4.67503 4.72148 4.80226 4.82538 4.84686 4.88092 4.89530 4.98361 5.05846 5.07497 5.08313 5.18630 5.22984 5.29142 5.49447 5.54551 5.70865 6.16330 6.38706 6.87686 7.05674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.090 4.090 3 Si 0.787 3.213 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.072 4.072 7 C -0.202 4.202 8 C 0.121 3.879 9 O -0.317 6.317 10 C 0.034 3.966 11 C 0.517 3.483 12 O -0.568 6.568 13 N -0.694 5.694 14 C 0.115 3.885 15 H 0.091 0.909 16 C -0.121 4.121 17 C -0.071 4.071 18 H 0.107 0.893 19 C -0.112 4.112 20 C 0.117 3.883 21 F -0.137 7.137 22 C -0.199 4.199 23 C 0.107 3.893 24 F -0.143 7.143 25 C -0.155 4.155 26 C -0.056 4.056 27 C -0.139 4.139 28 C -0.144 4.144 29 H 0.404 0.596 30 H 0.091 0.909 31 H -0.284 1.284 32 H -0.294 1.294 33 H 0.122 0.878 34 H 0.159 0.841 35 H 0.167 0.833 36 H 0.125 0.875 37 H 0.126 0.874 38 H 0.420 0.580 39 H 0.112 0.888 40 H 0.089 0.911 41 H 0.151 0.849 42 H 0.161 0.839 43 H 0.171 0.829 44 H 0.069 0.931 45 H 0.109 0.891 46 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.378 2.444 -0.821 2.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.199 4.199 3 Si 0.692 3.308 4 C -0.052 4.052 5 C -0.199 4.199 6 C -0.089 4.089 7 C -0.220 4.220 8 C 0.076 3.924 9 O -0.230 6.230 10 C -0.043 4.043 11 C 0.304 3.696 12 O -0.446 6.446 13 N -0.348 5.348 14 C 0.009 3.991 15 H 0.109 0.891 16 C -0.159 4.159 17 C -0.089 4.089 18 H 0.125 0.875 19 C -0.113 4.113 20 C 0.098 3.902 21 F -0.115 7.115 22 C -0.218 4.218 23 C 0.088 3.912 24 F -0.121 7.121 25 C -0.174 4.174 26 C -0.074 4.074 27 C -0.178 4.178 28 C -0.162 4.162 29 H 0.255 0.745 30 H 0.109 0.891 31 H -0.211 1.211 32 H -0.222 1.222 33 H 0.139 0.861 34 H 0.176 0.824 35 H 0.184 0.816 36 H 0.143 0.857 37 H 0.144 0.856 38 H 0.258 0.742 39 H 0.130 0.870 40 H 0.108 0.892 41 H 0.168 0.832 42 H 0.179 0.821 43 H 0.188 0.812 44 H 0.088 0.912 45 H 0.127 0.873 46 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 1.354 2.252 -1.074 2.839 hybrid contribution 0.794 -0.658 -0.961 1.410 sum 2.148 1.594 -2.035 3.361 Atomic orbital electron populations 1.86450 1.17227 1.82539 1.51341 1.25035 0.85985 1.11899 0.96954 0.94238 0.77230 0.74549 0.84762 1.19500 0.96593 0.93079 0.96033 1.21021 1.02459 0.99742 0.96680 1.21242 0.97428 0.94026 0.96241 1.21610 1.02553 0.96389 1.01495 1.19173 0.95212 0.83075 0.94986 1.86126 1.71201 1.22827 1.42858 1.22771 1.02031 0.90843 0.88673 1.20440 0.79682 0.87744 0.81760 1.90767 1.38681 1.75424 1.39724 1.45376 1.53348 1.11524 1.24514 1.21884 0.98282 0.80133 0.98763 0.89111 1.23412 0.95208 1.01876 0.95381 1.21607 0.98413 0.92805 0.96092 0.87530 1.19969 0.96438 0.97688 0.97185 1.17292 0.93831 0.82393 0.96716 1.91503 1.79103 1.52357 1.88541 1.21171 1.04447 0.91059 1.05142 1.17577 0.97506 0.79706 0.96451 1.91526 1.92651 1.41782 1.86160 1.21518 0.98009 1.00633 0.97238 1.21072 0.98488 0.89454 0.98368 1.23644 0.98692 1.00471 0.94966 1.20332 1.03551 0.94512 0.97847 0.74487 0.89075 1.21090 1.22193 0.86069 0.82385 0.81599 0.85721 0.85623 0.74199 0.86977 0.89233 0.83164 0.82108 0.81180 0.91248 0.87317 0.85779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.47 12.75 -148.98 -1.90 -3.37 16 2 C -0.09 -0.17 2.81 71.23 0.20 0.03 16 3 Si 0.79 -1.14 29.79 68.60 2.04 0.90 16 4 C -0.05 -0.38 5.42 -19.88 -0.11 -0.48 16 5 C -0.18 -0.99 8.67 22.28 0.19 -0.79 16 6 C -0.07 -0.10 10.04 22.25 0.22 0.12 16 7 C -0.20 -0.15 9.04 22.36 0.20 0.06 16 8 C 0.12 0.81 6.69 22.51 0.15 0.96 16 9 O -0.32 -2.50 9.67 -73.35 -0.71 -3.21 16 10 C 0.03 -0.08 5.22 71.24 0.37 0.29 16 11 C 0.52 1.27 7.91 87.66 0.69 1.97 16 12 O -0.57 -7.93 16.12 16.01 0.26 -7.68 16 13 N -0.69 3.51 5.26 -440.05 -2.32 1.19 16 14 C 0.11 -0.50 4.29 45.52 0.20 -0.30 16 15 H 0.09 0.01 7.50 -2.38 -0.02 -0.01 16 16 C -0.12 1.00 7.29 31.12 0.23 1.23 16 17 C -0.07 0.47 3.79 -10.92 -0.04 0.42 16 18 H 0.11 -0.73 7.45 -2.38 -0.02 -0.75 16 19 C -0.11 0.41 5.30 -19.82 -0.10 0.30 16 20 C 0.12 0.01 7.24 22.37 0.16 0.17 16 21 F -0.14 -0.24 16.36 44.97 0.74 0.50 16 22 C -0.20 -0.17 10.01 22.36 0.22 0.05 16 23 C 0.11 0.11 7.30 22.37 0.16 0.27 16 24 F -0.14 -0.60 17.27 44.97 0.78 0.17 16 25 C -0.16 0.53 10.03 22.32 0.22 0.75 16 26 C -0.06 0.33 8.61 22.25 0.19 0.52 16 27 C -0.14 0.77 7.27 31.21 0.23 1.00 16 28 C -0.14 -1.34 9.56 22.37 0.21 -1.13 16 29 H 0.40 -3.42 8.74 -74.06 -0.65 -4.07 16 30 H 0.09 -0.14 7.96 -2.39 -0.02 -0.16 16 31 H -0.28 -0.89 7.11 99.48 0.71 -0.18 16 32 H -0.29 -1.67 7.11 99.48 0.71 -0.96 16 33 H 0.12 0.50 4.87 -2.91 -0.01 0.49 16 34 H 0.16 -0.74 8.06 -2.91 -0.02 -0.76 16 35 H 0.17 -1.21 6.30 -2.91 -0.02 -1.23 16 36 H 0.13 -1.05 7.66 -2.39 -0.02 -1.07 16 37 H 0.13 -1.09 7.66 -2.39 -0.02 -1.11 16 38 H 0.42 -4.99 8.70 -92.70 -0.81 -5.80 16 39 H 0.11 -1.09 7.72 -2.39 -0.02 -1.11 16 40 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 41 H 0.15 -0.08 8.06 -2.91 -0.02 -0.11 16 42 H 0.16 -1.14 8.06 -2.91 -0.02 -1.16 16 43 H 0.17 -1.89 6.66 -2.91 -0.02 -1.91 16 44 H 0.07 -0.22 8.14 -2.38 -0.02 -0.24 16 45 H 0.11 -0.82 6.32 -2.39 -0.02 -0.84 16 46 H 0.12 1.33 8.06 -2.91 -0.02 1.30 16 Total: 0.00 -28.70 393.96 2.15 -26.55 By element: Atomic # 1 Polarization: -20.17 SS G_CDS: -0.35 Total: -20.52 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: 3.61 Total: 5.45 kcal Atomic # 7 Polarization: 3.51 SS G_CDS: -2.32 Total: 1.19 kcal Atomic # 8 Polarization: -11.90 SS G_CDS: -2.35 Total: -14.25 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 1.51 Total: 0.67 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: 2.04 Total: 0.90 kcal Total: -28.70 2.15 -26.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.490 kcal (2) G-P(sol) polarization free energy of solvation -28.700 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.553 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds