Wall clock time and date at job start Sun Mar 7 2021 00:09:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35982 * 117.00071 * 2 1 4 4 C 1.38675 * 119.99930 * 180.02562 * 3 2 1 5 5 C 1.38150 * 120.00030 * 180.02562 * 4 3 2 6 6 C 1.50706 * 120.00291 * 180.02562 * 5 4 3 7 7 O 1.42897 * 109.46933 * 254.95374 * 6 5 4 8 8 Si 1.86299 * 109.46843 * 14.95056 * 6 5 4 9 9 C 1.38673 * 120.00115 * 359.94943 * 5 4 3 10 10 O 1.35986 * 120.00396 * 180.29943 * 9 5 4 11 11 C 1.42902 * 117.00267 * 179.72725 * 10 9 5 12 12 C 1.50698 * 109.46917 * 180.02562 * 11 10 9 13 13 O 1.21283 * 120.00151 * 359.97438 * 12 11 10 14 14 N 1.34775 * 119.99795 * 180.02562 * 12 11 10 15 15 C 1.46498 * 120.00131 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.85190 * 336.19210 * 15 14 12 17 17 C 1.53775 * 113.61602 * 107.50269 * 15 14 12 18 18 C 1.53778 * 87.08432 * 89.11659 * 17 15 14 19 19 H 1.08998 * 113.61691 * 270.88632 * 18 17 15 20 20 C 1.50697 * 113.69123 * 139.99048 * 18 17 15 21 21 C 1.38460 * 119.98781 * 142.46656 * 20 18 17 22 22 F 1.35106 * 120.00975 * 359.95446 * 21 20 18 23 23 C 1.38436 * 119.97507 * 179.97438 * 21 20 18 24 24 C 1.38394 * 119.95394 * 359.97438 * 23 21 20 25 25 F 1.35092 * 120.01703 * 179.97438 * 24 23 21 26 26 C 1.38496 * 119.97075 * 0.02562 * 24 23 21 27 27 C 1.38186 * 120.02494 * 359.74408 * 26 24 23 28 28 C 1.53778 * 87.08194 * 25.43366 * 18 17 15 29 29 C 1.38725 * 119.99866 * 0.03161 * 9 5 4 30 30 C 1.38104 * 120.00105 * 359.97438 * 29 9 5 31 31 H 1.09011 * 109.46913 * 59.99860 * 1 2 3 32 32 H 1.08997 * 109.47498 * 179.97438 * 1 2 3 33 33 H 1.08997 * 109.47100 * 300.00148 * 1 2 3 34 34 H 1.08006 * 119.99997 * 0.02898 * 4 3 2 35 35 H 1.09001 * 109.47405 * 134.95091 * 6 5 4 36 36 H 0.96701 * 114.00393 * 59.99673 * 7 6 5 37 37 H 1.48503 * 110.00119 * 58.68103 * 8 6 5 38 38 H 1.48502 * 110.00096 * 180.02562 * 8 6 5 39 39 H 1.08997 * 109.46809 * 300.00275 * 11 10 9 40 40 H 1.08997 * 109.46973 * 60.00370 * 11 10 9 41 41 H 0.97005 * 120.00324 * 359.97438 * 14 12 11 42 42 H 1.09003 * 113.61629 * 203.66813 * 17 15 14 43 43 H 1.09000 * 113.61273 * 334.56736 * 17 15 14 44 44 H 1.08005 * 120.02329 * 179.97438 * 23 21 20 45 45 H 1.08005 * 119.98800 * 179.97438 * 26 24 23 46 46 H 1.08009 * 119.97333 * 180.25459 * 27 26 24 47 47 H 1.09000 * 113.61628 * 220.02318 * 28 18 17 48 48 H 1.08997 * 113.61824 * 89.11422 * 28 18 17 49 49 H 1.08000 * 119.99609 * 180.02562 * 29 9 5 50 50 H 1.07991 * 120.00428 * 179.97438 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0584 2.5150 0.0000 6 6 5.5634 2.5940 -0.0012 7 8 6.0218 2.9670 1.2998 8 14 6.2720 0.9322 -0.4563 9 6 3.3032 3.6781 0.0000 10 8 3.9205 4.8897 -0.0056 11 6 3.0806 6.0458 -0.0113 12 6 3.9349 7.2873 -0.0177 13 8 5.1439 7.1915 -0.0169 14 7 3.3553 8.5040 -0.0232 15 6 4.1856 9.7109 -0.0299 16 1 5.1830 9.5408 0.3755 17 6 4.1845 10.4520 -1.3773 18 6 2.9638 11.2304 -0.8589 19 1 2.0119 10.7478 -1.0805 20 6 2.9779 12.6922 -1.2245 21 6 1.7972 13.3333 -1.5593 22 9 0.6328 12.6482 -1.5591 23 6 1.8104 14.6764 -1.8946 24 6 3.0040 15.3770 -1.8943 25 9 3.0184 16.6875 -2.2217 26 6 4.1838 14.7337 -1.5591 27 6 4.1687 13.3941 -1.2200 28 6 3.4833 10.9453 0.5601 29 6 1.9179 3.6055 0.0002 30 6 1.2908 2.3750 -0.0003 31 1 -0.3633 0.5139 -0.8901 32 1 -0.3634 -1.0276 -0.0005 33 1 -0.3633 0.5138 0.8899 34 1 4.0194 0.3783 -0.0014 35 1 5.8877 3.3386 -0.7281 36 1 5.7690 2.3481 1.9985 37 1 5.7773 0.5182 -1.7939 38 1 7.7556 0.9964 -0.4604 39 1 2.4516 6.0335 -0.9013 40 1 2.4512 6.0420 0.8786 41 1 2.3883 8.5807 -0.0234 42 1 5.0652 11.0748 -1.5339 43 1 3.9628 9.8089 -2.2291 44 1 0.8900 15.1772 -2.1562 45 1 5.1154 15.2800 -1.5592 46 1 5.0887 12.8943 -0.9547 47 1 2.6955 10.7004 1.2725 48 1 4.1723 11.7029 0.9333 49 1 1.3297 4.5113 -0.0003 50 1 0.2124 2.3185 0.0003 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:35 Heat of formation + Delta-G solvation = -136.401045 kcal Electronic energy + Delta-G solvation = -36988.483526 eV Core-core repulsion = 31585.661786 eV Total energy + Delta-G solvation = -5402.821740 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -50.09478 -50.03008 -41.88557 -41.54147 -40.49240 -39.77409 -38.78471 -38.00540 -36.83559 -34.71076 -32.79744 -32.05951 -31.73809 -30.97471 -29.39896 -28.08275 -26.95280 -26.55449 -26.24320 -24.44709 -23.77945 -22.95261 -22.42080 -21.89598 -20.44622 -19.60765 -19.39093 -18.78212 -18.56246 -18.24442 -17.76107 -17.49275 -17.38370 -17.06759 -17.05981 -16.96991 -16.72011 -16.63389 -16.36202 -16.04411 -15.88591 -15.71702 -15.56430 -15.48855 -15.26686 -15.15592 -14.91274 -14.62579 -14.25685 -14.14292 -13.98267 -13.91755 -13.71642 -13.61399 -13.55704 -13.50353 -13.03862 -12.94442 -12.68307 -12.60912 -12.27351 -12.22744 -11.93313 -11.89348 -11.76962 -11.49830 -11.48282 -10.91840 -10.26719 -10.25807 -10.18071 -10.11490 -9.68396 -8.78978 -4.92649 -0.21460 -0.13775 0.05830 0.37558 1.38865 1.40401 1.44833 1.75875 2.09250 2.16984 2.24727 2.52137 2.56209 2.74787 3.14166 3.31845 3.34508 3.38641 3.46621 3.50908 3.53620 3.65474 3.68158 3.73982 3.76418 3.79984 3.88882 3.89311 4.02575 4.03257 4.07758 4.12474 4.16322 4.33273 4.42151 4.49446 4.50744 4.57316 4.59048 4.63017 4.64656 4.68595 4.73522 4.79587 4.81876 4.90687 4.93498 5.01649 5.10950 5.13376 5.19297 5.38628 5.42080 5.62160 6.12409 6.28625 6.40615 6.76699 7.06035 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.099 3.901 4 C -0.107 4.107 5 C -0.108 4.108 6 C -0.056 4.056 7 O -0.530 6.530 8 Si 0.681 3.319 9 C 0.116 3.884 10 O -0.277 6.277 11 C 0.039 3.961 12 C 0.519 3.481 13 O -0.504 6.504 14 N -0.713 5.713 15 C 0.122 3.878 16 H 0.110 0.890 17 C -0.143 4.143 18 C -0.075 4.075 19 H 0.104 0.896 20 C -0.115 4.115 21 C 0.133 3.867 22 F -0.129 7.129 23 C -0.190 4.190 24 C 0.128 3.872 25 F -0.130 7.130 26 C -0.159 4.159 27 C -0.060 4.060 28 C -0.134 4.134 29 C -0.170 4.170 30 C -0.161 4.161 31 H 0.055 0.945 32 H 0.103 0.897 33 H 0.056 0.944 34 H 0.145 0.855 35 H 0.117 0.883 36 H 0.374 0.626 37 H -0.256 1.256 38 H -0.252 1.252 39 H 0.092 0.908 40 H 0.094 0.906 41 H 0.403 0.597 42 H 0.098 0.902 43 H 0.078 0.922 44 H 0.149 0.851 45 H 0.145 0.855 46 H 0.146 0.854 47 H 0.080 0.920 48 H 0.102 0.898 49 H 0.133 0.867 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.649 -1.010 1.948 6.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.054 3.946 4 C -0.125 4.125 5 C -0.109 4.109 6 C -0.166 4.166 7 O -0.334 6.334 8 Si 0.582 3.418 9 C 0.071 3.929 10 O -0.189 6.189 11 C -0.040 4.040 12 C 0.303 3.697 13 O -0.377 6.377 14 N -0.366 5.366 15 C 0.017 3.983 16 H 0.128 0.872 17 C -0.181 4.181 18 C -0.094 4.094 19 H 0.122 0.878 20 C -0.116 4.116 21 C 0.114 3.886 22 F -0.107 7.107 23 C -0.210 4.210 24 C 0.108 3.892 25 F -0.108 7.108 26 C -0.178 4.178 27 C -0.078 4.078 28 C -0.172 4.172 29 C -0.189 4.189 30 C -0.180 4.180 31 H 0.074 0.926 32 H 0.121 0.879 33 H 0.075 0.925 34 H 0.162 0.838 35 H 0.135 0.865 36 H 0.221 0.779 37 H -0.180 1.180 38 H -0.177 1.177 39 H 0.110 0.890 40 H 0.112 0.888 41 H 0.237 0.763 42 H 0.117 0.883 43 H 0.096 0.904 44 H 0.167 0.833 45 H 0.163 0.837 46 H 0.163 0.837 47 H 0.099 0.901 48 H 0.120 0.880 49 H 0.151 0.849 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -3.752 -1.180 1.029 4.066 hybrid contribution -1.824 1.191 -0.398 2.215 sum -5.577 0.011 0.631 5.612 Atomic orbital electron populations 1.23096 0.78081 1.04364 1.01331 1.86105 1.21527 1.26211 1.88987 1.18779 0.91896 0.84547 0.99372 1.20061 0.91708 0.96635 1.04108 1.19488 0.96712 0.89959 1.04783 1.24935 0.90811 1.11321 0.89580 1.86607 1.77892 1.53011 1.15879 0.95102 0.80659 0.80208 0.85786 1.18630 0.90483 0.84919 0.98883 1.86249 1.33206 1.10771 1.88718 1.22437 0.93185 0.84466 1.03869 1.20026 0.88883 0.84059 0.76689 1.90807 1.14090 1.86367 1.46436 1.45480 1.10182 1.04612 1.76366 1.21836 0.96214 0.83271 0.96957 0.87183 1.23591 0.97873 0.98578 0.98075 1.21562 1.00148 0.90417 0.97234 0.87833 1.19789 0.92006 0.96716 1.03123 1.17136 0.81526 0.89337 1.00637 1.91527 1.46120 1.79209 1.93890 1.21080 0.99337 0.93847 1.06687 1.17340 0.93828 0.78597 0.99403 1.91560 1.97241 1.32219 1.89798 1.21267 0.97836 0.95704 1.02949 1.20781 0.97683 0.92823 0.96496 1.23452 1.00851 0.97147 0.95724 1.21060 0.92943 0.98703 1.06214 1.21088 1.00310 0.91519 1.05097 0.92640 0.87899 0.92536 0.83782 0.86550 0.77943 1.18048 1.17694 0.88989 0.88816 0.76281 0.88320 0.90354 0.83300 0.83718 0.83653 0.90114 0.87966 0.84923 0.84746 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.26 10.50 -19.68 -0.21 -0.47 16 3 C 0.10 0.10 6.69 -39.24 -0.26 -0.16 16 4 C -0.11 -0.10 8.59 -39.45 -0.34 -0.44 16 5 C -0.11 -0.21 5.27 -104.49 -0.55 -0.76 16 6 C -0.06 -0.13 2.38 36.01 0.09 -0.04 16 7 O -0.53 -1.53 12.88 -35.23 -0.45 -1.99 16 8 Si 0.68 0.45 29.92 -169.99 -5.09 -4.64 16 9 C 0.12 0.24 6.66 -39.24 -0.26 -0.02 16 10 O -0.28 -0.89 8.99 -39.61 -0.36 -1.25 16 11 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 12 C 0.52 0.65 7.91 -10.99 -0.09 0.57 16 13 O -0.50 -3.23 16.10 -14.36 -0.23 -3.47 16 14 N -0.71 1.48 5.26 -53.02 -0.28 1.20 16 15 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 16 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 17 C -0.14 0.33 7.25 -25.92 -0.19 0.14 16 18 C -0.08 0.20 3.77 -90.96 -0.34 -0.14 16 19 H 0.10 -0.29 7.44 -51.93 -0.39 -0.67 16 20 C -0.12 0.15 5.30 -104.55 -0.55 -0.40 16 21 C 0.13 0.01 7.25 -39.43 -0.29 -0.28 16 22 F -0.13 -0.10 16.36 2.25 0.04 -0.07 16 23 C -0.19 -0.02 10.01 -39.45 -0.39 -0.42 16 24 C 0.13 0.04 7.30 -39.43 -0.29 -0.24 16 25 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 26 C -0.16 0.20 10.02 -39.51 -0.40 -0.19 16 27 C -0.06 0.13 8.59 -39.61 -0.34 -0.21 16 28 C -0.13 0.44 7.29 -25.92 -0.19 0.25 16 29 C -0.17 0.03 9.03 -39.45 -0.36 -0.33 16 30 C -0.16 0.04 9.03 -39.45 -0.36 -0.31 16 31 H 0.05 -0.18 7.66 -51.92 -0.40 -0.58 16 32 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 33 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 34 H 0.15 -0.14 5.13 -52.48 -0.27 -0.41 16 35 H 0.12 0.47 7.82 -51.93 -0.41 0.07 16 36 H 0.37 -0.59 8.70 45.56 0.40 -0.19 16 37 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 38 H -0.25 -0.94 7.11 56.52 0.40 -0.54 16 39 H 0.09 -0.31 7.66 -51.93 -0.40 -0.71 16 40 H 0.09 -0.31 7.66 -51.93 -0.40 -0.71 16 41 H 0.40 -2.02 8.70 -40.82 -0.36 -2.38 16 42 H 0.10 -0.30 6.33 -51.93 -0.33 -0.63 16 43 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.15 -0.13 8.06 -52.48 -0.42 -0.56 16 45 H 0.14 -0.42 8.06 -52.48 -0.42 -0.84 16 46 H 0.15 -0.63 6.68 -52.48 -0.35 -0.98 16 47 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 48 H 0.10 -0.39 7.71 -51.93 -0.40 -0.79 16 49 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16 50 H 0.13 -0.33 6.29 -52.49 -0.33 -0.66 16 LS Contribution 422.93 15.07 6.37 6.37 Total: 0.00 -11.17 422.93 -10.43 -21.60 By element: Atomic # 1 Polarization: -8.65 SS G_CDS: -6.05 Total: -14.70 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -4.22 Total: -2.42 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -0.28 Total: 1.20 kcal Atomic # 8 Polarization: -5.92 SS G_CDS: -1.25 Total: -7.17 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.08 Total: -0.25 kcal Atomic # 14 Polarization: 0.45 SS G_CDS: -5.09 Total: -4.64 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -11.17 -10.43 -21.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.800 kcal (2) G-P(sol) polarization free energy of solvation -11.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds