Wall clock time and date at job start Sun Mar 7 2021 00:09:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37637 * 125.67344 * 2 1 4 4 C 1.46671 * 126.22833 * 359.96714 * 3 2 1 5 5 O 1.21701 * 120.00053 * 354.70953 * 4 3 2 6 6 N 1.34776 * 120.00653 * 174.71625 * 4 3 2 7 7 C 1.46498 * 120.00332 * 185.07550 * 6 4 3 8 8 H 1.08997 * 112.85357 * 336.19757 * 7 6 4 9 9 C 1.53777 * 113.61064 * 107.50494 * 7 6 4 10 10 C 1.53779 * 87.08395 * 89.11686 * 9 7 6 11 11 H 1.09003 * 113.61325 * 270.87840 * 10 9 7 12 12 C 1.50707 * 113.69341 * 139.99274 * 10 9 7 13 13 C 1.38447 * 119.98745 * 142.18608 * 12 10 9 14 14 F 1.35095 * 120.01386 * 0.02722 * 13 12 10 15 15 C 1.38445 * 119.96976 * 179.76267 * 13 12 10 16 16 C 1.38389 * 119.95136 * 0.49208 * 15 13 12 17 17 F 1.35099 * 120.01347 * 179.78311 * 16 15 13 18 18 C 1.38498 * 119.97596 * 359.76237 * 16 15 13 19 19 C 1.38191 * 120.02532 * 0.02562 * 18 16 15 20 20 C 1.53779 * 87.08269 * 25.43082 * 10 9 7 21 21 C 1.37885 * 107.55169 * 179.71595 * 3 2 1 22 22 C 1.39882 * 107.08810 * 0.42274 * 21 3 2 23 23 Br 1.89099 * 126.07544 * 179.83680 * 22 21 3 24 24 C 1.35507 * 107.85159 * 359.57870 * 22 21 3 25 25 C 1.50699 * 125.57127 * 180.26418 * 24 22 21 26 26 O 1.42894 * 109.47183 * 235.42856 * 25 24 22 27 27 Si 1.86299 * 109.47215 * 115.42331 * 25 24 22 28 28 H 1.09004 * 109.46802 * 275.65937 * 1 2 3 29 29 H 1.08998 * 109.47664 * 35.66370 * 1 2 3 30 30 H 1.09003 * 109.47131 * 155.66993 * 1 2 3 31 31 H 0.97006 * 119.99503 * 5.07964 * 6 4 3 32 32 H 1.09009 * 113.61049 * 203.66433 * 9 7 6 33 33 H 1.09000 * 113.61655 * 334.56076 * 9 7 6 34 34 H 1.08000 * 120.02154 * 180.25354 * 15 13 12 35 35 H 1.07999 * 119.98835 * 180.02562 * 18 16 15 36 36 H 1.07997 * 119.97337 * 179.97438 * 19 18 16 37 37 H 1.08996 * 113.61249 * 220.02101 * 20 10 9 38 38 H 1.08996 * 113.61180 * 89.11759 * 20 10 9 39 39 H 1.07999 * 126.45906 * 180.29627 * 21 3 2 40 40 H 1.09001 * 109.47183 * 355.42652 * 25 24 22 41 41 H 0.96698 * 114.00156 * 180.02562 * 26 25 24 42 42 H 1.48497 * 110.00308 * 303.82990 * 27 25 24 43 43 H 1.48504 * 109.99854 * 65.14931 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8120 2.5122 -0.0007 5 8 0.6255 2.7646 -0.0985 6 7 2.7072 3.5140 0.1069 7 6 2.2459 4.8999 0.2182 8 1 1.2495 5.0491 -0.1977 9 6 2.4245 5.4975 1.6238 10 6 3.8246 5.9439 1.1705 11 1 4.5994 5.1981 1.3480 12 6 4.2104 7.3164 1.6592 13 6 5.5141 7.5706 2.0497 14 9 6.4404 6.5889 1.9923 15 6 5.8693 8.8328 2.4940 16 6 4.9183 9.8362 2.5567 17 9 5.2625 11.0672 2.9942 18 6 3.6135 9.5781 2.1705 19 6 3.2610 8.3190 1.7230 20 6 3.2768 5.9331 -0.2664 21 6 3.5781 0.6892 0.0065 22 6 3.5529 -0.7094 0.0006 23 35 5.0610 -1.8502 0.0011 24 6 2.2558 -1.1015 0.0003 25 6 1.7714 -2.5285 0.0003 26 8 0.8947 -2.7339 -1.1092 27 14 0.8572 -2.8739 1.5865 28 1 -0.3633 0.1013 1.0227 29 1 -0.3634 0.8349 -0.5991 30 1 -0.3633 -0.9364 -0.4234 31 1 3.6571 3.3172 0.1105 32 1 1.7489 6.3266 1.8348 33 1 2.4400 4.7504 2.4172 34 1 6.8870 9.0332 2.7950 35 1 2.8713 10.3611 2.2190 36 1 2.2433 8.1186 1.4225 37 1 3.9803 5.5375 -0.9989 38 1 2.8343 6.8812 -0.5721 39 1 4.4582 1.3152 0.0127 40 1 2.6246 -3.2018 -0.0812 41 1 0.5435 -3.6327 -1.1718 42 1 1.7292 -2.5752 2.7507 43 1 -0.3766 -2.0499 1.6514 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:46 Heat of formation + Delta-G solvation = -43.969622 kcal Electronic energy + Delta-G solvation = -31917.883609 eV Core-core repulsion = 27034.954226 eV Total energy + Delta-G solvation = -4882.929383 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.038 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.06692 -50.01578 -42.88210 -41.54682 -40.06064 -38.72044 -37.84953 -35.09174 -34.22114 -32.42651 -31.93672 -31.44968 -30.91178 -27.42104 -27.38045 -26.94998 -25.97661 -24.38269 -23.41304 -22.87231 -21.74732 -20.57744 -20.23863 -19.39027 -18.90626 -18.63245 -18.25512 -17.63492 -17.05539 -17.02753 -16.97037 -16.87985 -16.66489 -16.34212 -16.03585 -15.79560 -15.60061 -15.47500 -15.30198 -15.00801 -14.62606 -14.41471 -14.35277 -14.21031 -14.09447 -13.91881 -13.78812 -13.68185 -13.58551 -13.26892 -12.93956 -12.86097 -12.66954 -12.22239 -12.06825 -11.90126 -11.87911 -11.50004 -11.31942 -11.04892 -10.73108 -10.28767 -10.17525 -9.80954 -9.66981 -9.29407 -5.21499 -0.19956 -0.12299 0.12825 0.62970 0.89445 1.23495 1.39690 1.50097 1.81751 2.13360 2.16888 2.19242 2.76582 2.99687 3.14911 3.33153 3.36334 3.40995 3.49789 3.51928 3.55322 3.68982 3.75228 3.77797 3.91090 3.98235 4.04337 4.18485 4.26224 4.39458 4.41978 4.49192 4.57989 4.59522 4.61291 4.67563 4.70944 4.75405 4.80689 4.82743 4.91389 4.94588 5.11840 5.21636 5.40557 5.58623 5.63686 5.79695 6.27771 6.36134 6.99562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.386 5.386 3 C -0.034 4.034 4 C 0.597 3.403 5 O -0.537 6.537 6 N -0.701 5.701 7 C 0.122 3.878 8 H 0.112 0.888 9 C -0.143 4.143 10 C -0.076 4.076 11 H 0.104 0.896 12 C -0.115 4.115 13 C 0.134 3.866 14 F -0.128 7.128 15 C -0.190 4.190 16 C 0.128 3.872 17 F -0.130 7.130 18 C -0.159 4.159 19 C -0.060 4.060 20 C -0.134 4.134 21 C -0.110 4.110 22 C -0.160 4.160 23 Br -0.015 7.015 24 C 0.093 3.907 25 C -0.053 4.053 26 O -0.545 6.545 27 Si 0.686 3.314 28 H 0.077 0.923 29 H 0.108 0.892 30 H 0.102 0.898 31 H 0.405 0.595 32 H 0.099 0.901 33 H 0.078 0.922 34 H 0.149 0.851 35 H 0.145 0.855 36 H 0.145 0.855 37 H 0.081 0.919 38 H 0.103 0.897 39 H 0.158 0.842 40 H 0.098 0.902 41 H 0.390 0.610 42 H -0.249 1.249 43 H -0.246 1.246 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.669 -2.841 0.050 3.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.059 5.059 3 C -0.149 4.149 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.352 5.352 7 C 0.017 3.983 8 H 0.130 0.870 9 C -0.181 4.181 10 C -0.094 4.094 11 H 0.123 0.877 12 C -0.116 4.116 13 C 0.114 3.886 14 F -0.106 7.106 15 C -0.209 4.209 16 C 0.108 3.892 17 F -0.108 7.108 18 C -0.178 4.178 19 C -0.078 4.078 20 C -0.172 4.172 21 C -0.137 4.137 22 C -0.246 4.246 23 Br 0.069 6.931 24 C -0.028 4.028 25 C -0.163 4.163 26 O -0.352 6.352 27 Si 0.584 3.416 28 H 0.096 0.904 29 H 0.127 0.873 30 H 0.120 0.880 31 H 0.241 0.759 32 H 0.117 0.883 33 H 0.097 0.903 34 H 0.167 0.833 35 H 0.163 0.837 36 H 0.163 0.837 37 H 0.100 0.900 38 H 0.121 0.879 39 H 0.176 0.824 40 H 0.115 0.885 41 H 0.239 0.761 42 H -0.173 1.173 43 H -0.170 1.170 Dipole moment (debyes) X Y Z Total from point charges -2.509 -2.066 0.654 3.315 hybrid contribution 0.998 0.630 -0.149 1.189 sum -1.511 -1.436 0.504 2.145 Atomic orbital electron populations 1.22602 0.74804 1.06560 1.04367 1.43770 1.07332 1.03889 1.50898 1.20003 0.89788 0.87831 1.17310 1.16785 0.85630 0.83123 0.75986 1.90828 1.16145 1.84568 1.49979 1.45269 1.09788 1.05455 1.74672 1.21860 0.99809 0.79702 0.96909 0.87050 1.23602 0.95608 1.01302 0.97619 1.21569 0.98095 0.93051 0.96668 0.87737 1.19785 0.91878 0.97257 1.02702 1.17138 0.86203 0.85098 1.00112 1.91532 1.64766 1.60458 1.93893 1.21086 1.01682 0.91999 1.06177 1.17339 0.93203 0.80298 0.98333 1.91561 1.92778 1.39698 1.86793 1.21258 0.95118 0.98901 1.02528 1.20770 0.99663 0.90860 0.96509 1.23451 0.98159 0.99755 0.95814 1.21223 0.95188 0.92979 1.04269 1.20763 0.91067 0.94473 1.18268 1.96675 1.35449 1.62836 1.98156 1.19560 0.89003 0.87913 1.06296 1.24357 0.99170 0.91597 1.01186 1.86448 1.64639 1.36347 1.47758 0.95625 0.80487 0.90510 0.74981 0.90414 0.87343 0.87984 0.75919 0.88268 0.90337 0.83280 0.83747 0.83696 0.90003 0.87908 0.82434 0.88456 0.76137 1.17338 1.16997 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.10 8.66 59.85 0.52 0.62 16 2 N -0.39 -1.14 3.12 -115.59 -0.36 -1.50 16 3 C -0.03 -0.09 6.88 -81.99 -0.56 -0.65 16 4 C 0.60 1.41 7.77 -12.86 -0.10 1.31 16 5 O -0.54 -2.73 14.35 5.19 0.07 -2.66 16 6 N -0.70 0.54 5.25 -54.32 -0.29 0.25 16 7 C 0.12 -0.19 4.36 -67.12 -0.29 -0.48 16 8 H 0.11 -0.03 7.41 -51.93 -0.39 -0.41 16 9 C -0.14 0.31 7.25 -25.92 -0.19 0.12 16 10 C -0.08 0.17 3.78 -90.96 -0.34 -0.18 16 11 H 0.10 -0.21 7.44 -51.93 -0.39 -0.60 16 12 C -0.12 0.12 5.30 -104.54 -0.55 -0.43 16 13 C 0.13 0.06 7.24 -39.43 -0.29 -0.23 16 14 F -0.13 -0.17 16.36 2.25 0.04 -0.13 16 15 C -0.19 -0.07 10.01 -39.45 -0.39 -0.47 16 16 C 0.13 0.07 7.30 -39.43 -0.29 -0.22 16 17 F -0.13 -0.24 17.27 2.25 0.04 -0.20 16 18 C -0.16 0.19 10.03 -39.50 -0.40 -0.21 16 19 C -0.06 0.12 8.61 -39.60 -0.34 -0.22 16 20 C -0.13 0.39 7.29 -25.92 -0.19 0.20 16 21 C -0.11 -0.15 10.34 -39.10 -0.40 -0.55 16 22 C -0.16 -0.38 6.53 -39.94 -0.26 -0.65 16 23 Br -0.02 -0.02 33.06 -68.01 -2.25 -2.27 16 24 C 0.09 0.23 5.14 -81.91 -0.42 -0.19 16 25 C -0.05 0.02 2.78 36.00 0.10 0.12 16 26 O -0.54 0.56 11.32 -35.23 -0.40 0.16 16 27 Si 0.69 -0.97 31.35 -169.99 -5.33 -6.30 16 28 H 0.08 0.12 7.76 -51.93 -0.40 -0.28 16 29 H 0.11 0.28 6.54 -51.93 -0.34 -0.06 16 30 H 0.10 0.07 5.76 -51.93 -0.30 -0.23 16 31 H 0.41 -1.13 7.60 -40.82 -0.31 -1.44 16 32 H 0.10 -0.31 6.32 -51.92 -0.33 -0.64 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 34 H 0.15 -0.09 8.06 -52.49 -0.42 -0.52 16 35 H 0.14 -0.41 8.06 -52.49 -0.42 -0.83 16 36 H 0.15 -0.62 6.66 -52.49 -0.35 -0.97 16 37 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.10 -0.37 7.72 -51.93 -0.40 -0.77 16 39 H 0.16 -0.23 7.45 -52.49 -0.39 -0.62 16 40 H 0.10 -0.13 6.95 -51.93 -0.36 -0.49 16 41 H 0.39 -2.39 8.74 45.56 0.40 -2.00 16 42 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 43 H -0.25 -0.14 6.20 56.52 0.35 0.21 16 LS Contribution 383.40 15.07 5.78 5.78 Total: 0.00 -8.31 383.40 -11.59 -19.90 By element: Atomic # 1 Polarization: -6.42 SS G_CDS: -4.50 Total: -10.92 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -4.40 Total: -2.11 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.65 Total: -1.25 kcal Atomic # 8 Polarization: -2.18 SS G_CDS: -0.32 Total: -2.50 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.08 Total: -0.34 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.33 Total: -6.30 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.25 Total: -2.27 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -8.31 -11.59 -19.90 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.065 kcal (2) G-P(sol) polarization free energy of solvation -8.311 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.905 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds