Wall clock time and date at job start Sun Mar 7 2021 00:09:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37637 * 125.67344 * 2 1 4 4 C 1.46671 * 126.22833 * 359.96714 * 3 2 1 5 5 O 1.21701 * 120.00053 * 354.70953 * 4 3 2 6 6 N 1.34776 * 120.00653 * 174.71625 * 4 3 2 7 7 C 1.46498 * 120.00332 * 185.07550 * 6 4 3 8 8 H 1.08997 * 112.85357 * 336.19757 * 7 6 4 9 9 C 1.53777 * 113.61064 * 107.50494 * 7 6 4 10 10 C 1.53779 * 87.08395 * 89.11686 * 9 7 6 11 11 H 1.09003 * 113.61325 * 270.87840 * 10 9 7 12 12 C 1.50707 * 113.69341 * 139.99274 * 10 9 7 13 13 C 1.38447 * 119.98745 * 142.18608 * 12 10 9 14 14 F 1.35095 * 120.01386 * 0.02722 * 13 12 10 15 15 C 1.38445 * 119.96976 * 179.76267 * 13 12 10 16 16 C 1.38389 * 119.95136 * 0.49208 * 15 13 12 17 17 F 1.35099 * 120.01347 * 179.78311 * 16 15 13 18 18 C 1.38498 * 119.97596 * 359.76237 * 16 15 13 19 19 C 1.38191 * 120.02532 * 0.02562 * 18 16 15 20 20 C 1.53779 * 87.08269 * 25.43082 * 10 9 7 21 21 C 1.37885 * 107.55169 * 179.71595 * 3 2 1 22 22 C 1.39882 * 107.08810 * 0.42274 * 21 3 2 23 23 Br 1.89099 * 126.07544 * 179.83680 * 22 21 3 24 24 C 1.35507 * 107.85159 * 359.57870 * 22 21 3 25 25 C 1.50699 * 125.57127 * 180.26418 * 24 22 21 26 26 O 1.42894 * 109.47183 * 235.42856 * 25 24 22 27 27 Si 1.86299 * 109.47215 * 115.42331 * 25 24 22 28 28 H 1.09004 * 109.46802 * 275.65937 * 1 2 3 29 29 H 1.08998 * 109.47664 * 35.66370 * 1 2 3 30 30 H 1.09003 * 109.47131 * 155.66993 * 1 2 3 31 31 H 0.97006 * 119.99503 * 5.07964 * 6 4 3 32 32 H 1.09009 * 113.61049 * 203.66433 * 9 7 6 33 33 H 1.09000 * 113.61655 * 334.56076 * 9 7 6 34 34 H 1.08000 * 120.02154 * 180.25354 * 15 13 12 35 35 H 1.07999 * 119.98835 * 180.02562 * 18 16 15 36 36 H 1.07997 * 119.97337 * 179.97438 * 19 18 16 37 37 H 1.08996 * 113.61249 * 220.02101 * 20 10 9 38 38 H 1.08996 * 113.61180 * 89.11759 * 20 10 9 39 39 H 1.07999 * 126.45906 * 180.29627 * 21 3 2 40 40 H 1.09001 * 109.47183 * 355.42652 * 25 24 22 41 41 H 0.96698 * 114.00156 * 180.02562 * 26 25 24 42 42 H 1.48497 * 110.00308 * 303.82990 * 27 25 24 43 43 H 1.48504 * 109.99854 * 65.14931 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8120 2.5122 -0.0007 5 8 0.6255 2.7646 -0.0985 6 7 2.7072 3.5140 0.1069 7 6 2.2459 4.8999 0.2182 8 1 1.2495 5.0491 -0.1977 9 6 2.4245 5.4975 1.6238 10 6 3.8246 5.9439 1.1705 11 1 4.5994 5.1981 1.3480 12 6 4.2104 7.3164 1.6592 13 6 5.5141 7.5706 2.0497 14 9 6.4404 6.5889 1.9923 15 6 5.8693 8.8328 2.4940 16 6 4.9183 9.8362 2.5567 17 9 5.2625 11.0672 2.9942 18 6 3.6135 9.5781 2.1705 19 6 3.2610 8.3190 1.7230 20 6 3.2768 5.9331 -0.2664 21 6 3.5781 0.6892 0.0065 22 6 3.5529 -0.7094 0.0006 23 35 5.0610 -1.8502 0.0011 24 6 2.2558 -1.1015 0.0003 25 6 1.7714 -2.5285 0.0003 26 8 0.8947 -2.7339 -1.1092 27 14 0.8572 -2.8739 1.5865 28 1 -0.3633 0.1013 1.0227 29 1 -0.3634 0.8349 -0.5991 30 1 -0.3633 -0.9364 -0.4234 31 1 3.6571 3.3172 0.1105 32 1 1.7489 6.3266 1.8348 33 1 2.4400 4.7504 2.4172 34 1 6.8870 9.0332 2.7950 35 1 2.8713 10.3611 2.2190 36 1 2.2433 8.1186 1.4225 37 1 3.9803 5.5375 -0.9989 38 1 2.8343 6.8812 -0.5721 39 1 4.4582 1.3152 0.0127 40 1 2.6246 -3.2018 -0.0812 41 1 0.5435 -3.6327 -1.1718 42 1 1.7292 -2.5752 2.7507 43 1 -0.3766 -2.0499 1.6514 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:44 Heat of formation + Delta-G solvation = -40.061256 kcal Electronic energy + Delta-G solvation = -31917.714129 eV Core-core repulsion = 27034.954226 eV Total energy + Delta-G solvation = -4882.759904 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.038 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -50.09387 -50.06210 -42.97857 -41.47915 -40.10295 -38.69873 -37.76453 -35.16112 -34.31616 -32.46340 -31.87207 -31.44110 -30.96315 -27.51748 -27.40707 -26.76692 -25.90987 -24.31664 -23.44870 -22.84749 -21.81424 -20.62740 -20.20178 -19.38513 -18.95360 -18.55172 -18.22920 -17.64905 -17.09414 -17.05053 -16.95282 -16.88382 -16.66008 -16.39173 -16.05220 -15.83404 -15.59554 -15.49797 -15.23768 -15.00005 -14.70211 -14.47871 -14.38284 -14.26805 -14.02658 -13.87683 -13.80503 -13.58444 -13.48064 -13.36511 -12.88799 -12.83536 -12.58296 -12.16143 -12.07799 -12.00373 -11.78496 -11.45486 -11.35565 -11.19088 -10.67983 -10.28560 -10.11476 -9.92313 -9.62022 -9.38923 -5.13666 -0.14743 -0.05231 0.01555 0.51154 0.86324 1.23294 1.34212 1.53904 1.85990 2.01416 2.13177 2.26201 2.80503 3.07019 3.26473 3.40485 3.41958 3.47100 3.56832 3.60403 3.64640 3.67331 3.83712 3.90891 3.97466 4.05009 4.05445 4.14650 4.23498 4.35896 4.46551 4.52167 4.59802 4.66810 4.71041 4.79347 4.82105 4.87178 4.89245 4.97084 5.05230 5.06568 5.13679 5.22903 5.46183 5.51418 5.69519 5.70720 6.28093 6.75413 6.93075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.399 5.399 3 C -0.054 4.054 4 C 0.595 3.405 5 O -0.572 6.572 6 N -0.687 5.687 7 C 0.117 3.883 8 H 0.100 0.900 9 C -0.137 4.137 10 C -0.073 4.073 11 H 0.102 0.898 12 C -0.111 4.111 13 C 0.116 3.884 14 F -0.138 7.138 15 C -0.199 4.199 16 C 0.107 3.893 17 F -0.142 7.142 18 C -0.155 4.155 19 C -0.055 4.055 20 C -0.122 4.122 21 C -0.103 4.103 22 C -0.179 4.179 23 Br -0.010 7.010 24 C 0.079 3.921 25 C -0.060 4.060 26 O -0.557 6.557 27 Si 0.776 3.224 28 H 0.075 0.925 29 H 0.098 0.902 30 H 0.112 0.888 31 H 0.415 0.585 32 H 0.114 0.886 33 H 0.067 0.933 34 H 0.150 0.850 35 H 0.163 0.837 36 H 0.173 0.827 37 H 0.085 0.915 38 H 0.116 0.884 39 H 0.182 0.818 40 H 0.108 0.892 41 H 0.411 0.589 42 H -0.297 1.297 43 H -0.273 1.273 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.999 -3.153 -0.461 3.762 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.072 5.072 3 C -0.168 4.168 4 C 0.383 3.617 5 O -0.452 6.452 6 N -0.338 5.338 7 C 0.012 3.988 8 H 0.118 0.882 9 C -0.176 4.176 10 C -0.091 4.091 11 H 0.120 0.880 12 C -0.112 4.112 13 C 0.096 3.904 14 F -0.116 7.116 15 C -0.218 4.218 16 C 0.088 3.912 17 F -0.121 7.121 18 C -0.173 4.173 19 C -0.073 4.073 20 C -0.160 4.160 21 C -0.130 4.130 22 C -0.265 4.265 23 Br 0.075 6.925 24 C -0.042 4.042 25 C -0.169 4.169 26 O -0.368 6.368 27 Si 0.678 3.322 28 H 0.094 0.906 29 H 0.116 0.884 30 H 0.130 0.870 31 H 0.253 0.747 32 H 0.132 0.868 33 H 0.086 0.914 34 H 0.168 0.832 35 H 0.180 0.820 36 H 0.190 0.810 37 H 0.104 0.896 38 H 0.135 0.865 39 H 0.199 0.801 40 H 0.126 0.874 41 H 0.264 0.736 42 H -0.224 1.224 43 H -0.199 1.199 Dipole moment (debyes) X Y Z Total from point charges -2.809 -2.391 0.118 3.691 hybrid contribution 1.116 0.716 0.032 1.326 sum -1.693 -1.674 0.150 2.386 Atomic orbital electron populations 1.22564 0.74702 1.06631 1.04092 1.43947 1.07638 1.04286 1.51323 1.20212 0.90318 0.87968 1.18337 1.16883 0.85486 0.83571 0.75763 1.90804 1.17498 1.85002 1.51946 1.45228 1.09981 1.05360 1.73264 1.21944 0.99788 0.79430 0.97673 0.88174 1.23607 0.95852 1.01396 0.96711 1.21552 0.97950 0.92435 0.97189 0.87995 1.19957 0.91398 0.97949 1.01946 1.17322 0.86775 0.84987 1.01290 1.91502 1.65238 1.60759 1.94112 1.21168 1.01985 0.92252 1.06441 1.17570 0.94126 0.79944 0.99557 1.91525 1.92986 1.40421 1.87156 1.21525 0.94646 0.99756 1.01393 1.21075 1.00612 0.90057 0.95520 1.23432 0.97466 0.99730 0.95331 1.21553 0.95556 0.93019 1.02887 1.20992 0.91435 0.95098 1.18987 1.96662 1.35003 1.62685 1.98189 1.20103 0.89294 0.89007 1.05761 1.24514 0.99994 0.90323 1.02057 1.86403 1.64557 1.38522 1.47307 0.94730 0.77147 0.88683 0.71602 0.90647 0.88357 0.86972 0.74697 0.86789 0.91437 0.83207 0.81978 0.80989 0.89595 0.86543 0.80052 0.87416 0.73567 1.22389 1.19884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.29 8.66 127.77 1.11 1.40 16 2 N -0.40 -2.73 3.12 -519.62 -1.62 -4.35 16 3 C -0.05 -0.32 6.88 40.35 0.28 -0.04 16 4 C 0.59 3.35 7.77 86.44 0.67 4.02 16 5 O -0.57 -6.65 14.35 -4.35 -0.06 -6.71 16 6 N -0.69 0.97 5.25 -444.00 -2.33 -1.36 16 7 C 0.12 -0.40 4.36 45.52 0.20 -0.20 16 8 H 0.10 -0.05 7.41 -2.39 -0.02 -0.06 16 9 C -0.14 0.69 7.25 31.12 0.23 0.91 16 10 C -0.07 0.38 3.78 -11.01 -0.04 0.34 16 11 H 0.10 -0.45 7.44 -2.39 -0.02 -0.46 16 12 C -0.11 0.31 5.30 -19.81 -0.10 0.21 16 13 C 0.12 0.14 7.24 22.37 0.16 0.30 16 14 F -0.14 -0.46 16.36 44.97 0.74 0.27 16 15 C -0.20 -0.32 10.01 22.35 0.22 -0.10 16 16 C 0.11 0.15 7.30 22.37 0.16 0.31 16 17 F -0.14 -0.65 17.27 44.97 0.78 0.13 16 18 C -0.15 0.50 10.03 22.32 0.22 0.73 16 19 C -0.06 0.31 8.61 22.26 0.19 0.50 16 20 C -0.12 0.85 7.29 31.12 0.23 1.08 16 21 C -0.10 -0.30 10.34 22.58 0.23 -0.07 16 22 C -0.18 -0.90 6.53 22.04 0.14 -0.75 16 23 Br -0.01 -0.03 33.06 -20.37 -0.67 -0.70 16 24 C 0.08 0.42 5.14 41.35 0.21 0.63 16 25 C -0.06 0.05 2.78 71.24 0.20 0.25 16 26 O -0.56 1.51 11.32 -148.98 -1.69 -0.18 16 27 Si 0.78 -2.08 31.35 68.60 2.15 0.07 16 28 H 0.08 0.36 7.76 -2.39 -0.02 0.34 16 29 H 0.10 0.68 6.54 -2.39 -0.02 0.66 16 30 H 0.11 0.23 5.76 -2.39 -0.01 0.22 16 31 H 0.42 -2.45 7.60 -92.70 -0.70 -3.15 16 32 H 0.11 -0.91 6.32 -2.38 -0.02 -0.92 16 33 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 34 H 0.15 0.04 8.06 -2.91 -0.02 0.02 16 35 H 0.16 -1.16 8.06 -2.91 -0.02 -1.19 16 36 H 0.17 -1.95 6.66 -2.91 -0.02 -1.97 16 37 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 38 H 0.12 -1.08 7.72 -2.39 -0.02 -1.10 16 39 H 0.18 -0.64 7.45 -2.91 -0.02 -0.66 16 40 H 0.11 -0.35 6.95 -2.39 -0.02 -0.37 16 41 H 0.41 -5.58 8.74 -74.06 -0.65 -6.22 16 42 H -0.30 -1.53 7.11 99.48 0.71 -0.83 16 43 H -0.27 -0.45 6.20 99.48 0.62 0.17 16 Total: 0.00 -20.95 383.40 1.31 -19.64 By element: Atomic # 1 Polarization: -16.05 SS G_CDS: -0.29 Total: -16.34 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 4.31 Total: 9.52 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: -3.95 Total: -5.71 kcal Atomic # 8 Polarization: -5.14 SS G_CDS: -1.75 Total: -6.89 kcal Atomic # 9 Polarization: -1.11 SS G_CDS: 1.51 Total: 0.40 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: 2.15 Total: 0.07 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.67 Total: -0.70 kcal Total: -20.95 1.31 -19.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.422 kcal (2) G-P(sol) polarization free energy of solvation -20.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.640 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds