Wall clock time and date at job start Sun Mar 7 2021 00:09:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35992 * 117.00102 * 2 1 4 4 C 1.39155 * 120.07450 * 180.02562 * 3 2 1 5 5 O 1.35999 * 120.07079 * 359.97203 * 4 3 2 6 6 C 1.42899 * 116.99737 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47134 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99819 * 0.02562 * 7 6 5 9 9 N 1.34784 * 120.00120 * 179.97438 * 7 6 5 10 10 C 1.46496 * 119.99797 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.85455 * 336.19767 * 10 9 7 12 12 C 1.53786 * 113.61513 * 107.50362 * 10 9 7 13 13 C 1.53784 * 87.07924 * 89.11240 * 12 10 9 14 14 H 1.08995 * 113.69158 * 270.87295 * 13 12 10 15 15 C 1.50697 * 113.61053 * 139.98054 * 13 12 10 16 16 C 1.38452 * 119.98628 * 142.23025 * 15 13 12 17 17 F 1.35105 * 120.01314 * 0.02562 * 16 15 13 18 18 C 1.38438 * 119.97618 * 179.77009 * 16 15 13 19 19 C 1.38393 * 119.95148 * 0.47987 * 18 16 15 20 20 F 1.35094 * 120.01760 * 179.79046 * 19 18 16 21 21 C 1.38496 * 119.97193 * 359.77100 * 19 18 16 22 22 C 1.38190 * 120.02548 * 0.02562 * 21 19 18 23 23 C 1.53778 * 113.61361 * 205.00187 * 10 9 7 24 24 C 1.38563 * 119.85389 * 180.02562 * 4 3 2 25 25 C 1.38242 * 120.00125 * 359.97438 * 24 4 3 26 26 C 1.38258 * 120.14563 * 359.97438 * 25 24 4 27 27 C 1.50699 * 119.92693 * 179.97438 * 26 25 24 28 28 O 1.42901 * 109.46830 * 119.99588 * 27 26 25 29 29 Si 1.86298 * 109.46950 * 0.02562 * 27 26 25 30 30 C 1.38240 * 120.14267 * 0.26821 * 26 25 24 31 31 H 1.09004 * 109.46853 * 180.02562 * 1 2 3 32 32 H 1.08997 * 109.47107 * 300.00192 * 1 2 3 33 33 H 1.08999 * 109.46951 * 60.00278 * 1 2 3 34 34 H 1.09000 * 109.46929 * 300.00265 * 6 5 4 35 35 H 1.09005 * 109.47040 * 60.00169 * 6 5 4 36 36 H 0.96994 * 119.99395 * 0.02562 * 9 7 6 37 37 H 1.08997 * 113.61553 * 203.66233 * 12 10 9 38 38 H 1.09003 * 113.61322 * 334.56756 * 12 10 9 39 39 H 1.08001 * 120.02570 * 180.25643 * 18 16 15 40 40 H 1.07997 * 119.98904 * 179.97438 * 21 19 18 41 41 H 1.07998 * 119.97580 * 180.02562 * 22 21 19 42 42 H 1.08999 * 113.61538 * 25.43065 * 23 10 9 43 43 H 1.08999 * 113.61560 * 156.33690 * 23 10 9 44 44 H 1.07999 * 120.00038 * 180.02562 * 24 4 3 45 45 H 1.07994 * 119.92863 * 180.02562 * 25 24 4 46 46 H 1.08991 * 109.47351 * 239.99735 * 27 26 25 47 47 H 0.96708 * 114.00246 * 299.99864 * 28 27 26 48 48 H 1.48506 * 109.99834 * 180.02562 * 29 27 26 49 49 H 1.48502 * 110.00011 * 301.31529 * 29 27 26 50 50 H 1.08000 * 119.99501 * 179.74641 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3006 -0.0005 7 6 6.2519 -1.0582 0.0002 8 8 5.5670 -2.0591 0.0002 9 7 7.5958 -1.1612 -0.0002 10 6 8.2291 -2.4822 -0.0001 11 1 7.5836 -3.2612 0.4056 12 6 8.8772 -2.8548 -1.3441 13 6 10.1581 -2.1817 -0.8234 14 1 10.2155 -1.1167 -1.0480 15 6 11.4191 -2.9244 -1.1827 16 6 12.5632 -2.2221 -1.5212 17 9 12.5494 -0.8712 -1.5291 18 6 13.7229 -2.9046 -1.8467 19 6 13.7344 -4.2885 -1.8428 20 9 14.8641 -4.9559 -2.1642 21 6 12.5873 -4.9890 -1.5088 22 6 11.4314 -4.3066 -1.1800 23 6 9.6471 -2.4855 0.5950 24 6 4.0603 2.5233 0.0000 25 6 3.3030 3.6798 0.0005 26 6 1.9224 3.6057 0.0000 27 6 1.1016 4.8696 0.0012 28 8 0.2777 4.9035 -1.1659 29 14 2.2365 6.3470 0.0024 30 6 1.2933 2.3748 0.0045 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3633 0.5138 0.8899 33 1 -0.3633 0.5138 -0.8900 34 1 5.9065 0.8504 -0.8905 35 1 5.9065 0.8504 0.8895 36 1 8.1434 -0.3607 -0.0006 37 1 8.9795 -3.9292 -1.4965 38 1 8.4329 -2.3454 -2.1992 39 1 14.6170 -2.3575 -2.1069 40 1 12.5958 -6.0689 -1.5060 41 1 10.5375 -4.8537 -0.9193 42 1 9.8244 -1.6779 1.3052 43 1 9.9599 -3.4589 0.9726 44 1 5.1386 2.5840 -0.0008 45 1 3.7908 4.6433 0.0005 46 1 0.4725 4.8934 0.8909 47 1 0.7719 4.8849 -1.9970 48 1 1.4392 7.5999 0.0042 49 1 3.1212 6.3069 1.1945 50 1 0.2147 2.3197 0.0082 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:50 Heat of formation + Delta-G solvation = -135.812882 kcal Electronic energy + Delta-G solvation = -36731.385977 eV Core-core repulsion = 31328.589742 eV Total energy + Delta-G solvation = -5402.796235 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -50.08547 -50.02303 -41.89195 -41.54814 -40.40989 -39.38420 -38.91100 -38.53703 -36.93194 -34.70758 -32.19039 -31.95961 -31.64840 -31.40731 -29.53688 -28.43588 -26.94581 -26.39911 -26.05527 -24.41852 -23.68736 -22.98724 -22.55702 -21.86386 -20.44288 -19.79813 -19.38350 -18.57386 -18.45621 -18.23051 -17.92746 -17.58380 -17.41791 -17.05882 -16.98084 -16.95638 -16.65857 -16.59584 -16.35320 -16.11351 -15.96808 -15.69956 -15.64024 -15.50568 -15.48537 -15.25056 -15.02693 -14.65064 -14.28340 -14.14196 -13.93435 -13.76355 -13.70583 -13.63631 -13.58062 -13.47100 -12.91973 -12.67533 -12.65839 -12.52398 -12.22598 -12.20300 -12.07048 -12.02553 -11.88239 -11.74708 -11.49010 -10.92348 -10.48734 -10.26277 -10.17395 -9.79775 -9.67656 -8.86269 -5.07873 -0.20691 -0.13044 0.16382 0.28554 1.25291 1.38034 1.44964 1.58932 1.93357 2.17722 2.30902 2.48054 2.56260 2.75576 3.14882 3.32603 3.35216 3.38798 3.40533 3.47980 3.51709 3.62073 3.68250 3.74124 3.77197 3.78505 3.89552 3.90189 3.92358 4.03952 4.11397 4.24759 4.28564 4.33578 4.42737 4.47486 4.50095 4.55539 4.58844 4.64385 4.64934 4.69194 4.74253 4.80397 4.82925 4.91374 4.94272 4.98540 5.08708 5.11851 5.35779 5.39978 5.54342 5.62914 5.94674 6.27384 6.52724 6.53805 7.06225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.108 3.892 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.519 3.481 8 O -0.506 6.506 9 N -0.712 5.712 10 C 0.122 3.878 11 H 0.110 0.890 12 C -0.143 4.143 13 C -0.075 4.075 14 H 0.104 0.896 15 C -0.115 4.115 16 C 0.133 3.867 17 F -0.129 7.129 18 C -0.190 4.190 19 C 0.128 3.872 20 F -0.130 7.130 21 C -0.159 4.159 22 C -0.060 4.060 23 C -0.134 4.134 24 C -0.169 4.169 25 C -0.114 4.114 26 C -0.115 4.115 27 C -0.066 4.066 28 O -0.541 6.541 29 Si 0.691 3.309 30 C -0.146 4.146 31 H 0.103 0.897 32 H 0.055 0.945 33 H 0.057 0.943 34 H 0.096 0.904 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.098 0.902 38 H 0.078 0.922 39 H 0.149 0.851 40 H 0.145 0.855 41 H 0.146 0.854 42 H 0.080 0.920 43 H 0.102 0.898 44 H 0.139 0.861 45 H 0.132 0.868 46 H 0.113 0.887 47 H 0.380 0.620 48 H -0.255 1.255 49 H -0.257 1.257 50 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.708 2.191 -0.825 3.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.062 3.938 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.304 3.696 8 O -0.379 6.379 9 N -0.366 5.366 10 C 0.017 3.983 11 H 0.128 0.872 12 C -0.181 4.181 13 C -0.094 4.094 14 H 0.122 0.878 15 C -0.116 4.116 16 C 0.114 3.886 17 F -0.107 7.107 18 C -0.210 4.210 19 C 0.108 3.892 20 F -0.108 7.108 21 C -0.178 4.178 22 C -0.078 4.078 23 C -0.172 4.172 24 C -0.188 4.188 25 C -0.132 4.132 26 C -0.116 4.116 27 C -0.177 4.177 28 O -0.346 6.346 29 Si 0.593 3.407 30 C -0.165 4.165 31 H 0.121 0.879 32 H 0.074 0.926 33 H 0.076 0.924 34 H 0.114 0.886 35 H 0.112 0.888 36 H 0.238 0.762 37 H 0.117 0.883 38 H 0.097 0.903 39 H 0.167 0.833 40 H 0.163 0.837 41 H 0.163 0.837 42 H 0.099 0.901 43 H 0.120 0.880 44 H 0.157 0.843 45 H 0.149 0.851 46 H 0.131 0.869 47 H 0.227 0.773 48 H -0.180 1.180 49 H -0.182 1.182 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.009 1.824 0.046 2.714 hybrid contribution 0.343 0.425 0.213 0.586 sum 2.352 2.249 0.259 3.264 Atomic orbital electron populations 1.23134 0.78096 1.04415 1.01381 1.86247 1.21352 1.25344 1.88534 1.18279 0.89009 0.85565 1.00995 1.18273 0.88296 0.85746 1.01901 1.86277 1.15981 1.27758 1.88893 1.22469 0.81360 0.96148 1.04066 1.20027 0.82320 0.90615 0.76656 1.90803 1.62534 1.38000 1.46518 1.45477 1.05857 1.08936 1.76335 1.21836 0.93843 0.85613 0.96998 0.87212 1.23596 0.94493 1.01915 0.98109 1.21570 0.90654 0.99902 0.97238 0.87777 1.19790 0.94526 0.94227 1.03091 1.17134 0.93755 0.77110 1.00619 1.91528 1.96937 1.28385 1.93877 1.21081 0.99607 0.93518 1.06748 1.17342 0.83094 0.89294 0.99451 1.91560 1.49022 1.80313 1.89935 1.21265 0.91868 1.01632 1.03006 1.20781 0.98012 0.92474 0.96522 1.23452 0.94073 1.03927 0.95746 1.20990 1.00461 0.90685 1.06641 1.20690 0.92781 0.97869 1.01853 1.20044 0.93695 0.95211 1.02617 1.25035 0.99555 1.01841 0.91260 1.86499 1.35748 1.96935 1.15416 0.94694 0.80870 0.76561 0.88594 1.20935 1.00424 0.90401 1.04761 0.87856 0.92624 0.92403 0.88648 0.88751 0.76225 0.88325 0.90283 0.83304 0.83735 0.83653 0.90116 0.87990 0.84291 0.85054 0.86921 0.77306 1.17989 1.18244 0.84159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.27 10.28 -34.22 -0.35 -1.62 16 3 C 0.11 0.34 6.70 -39.12 -0.26 0.08 16 4 C 0.10 0.25 6.70 -39.12 -0.26 -0.01 16 5 O -0.28 -0.98 9.45 -47.37 -0.45 -1.42 16 6 C 0.04 -0.04 5.22 36.00 0.19 0.14 16 7 C 0.52 0.51 7.91 -10.98 -0.09 0.42 16 8 O -0.51 -3.13 16.10 -14.36 -0.23 -3.36 16 9 N -0.71 1.72 5.26 -53.02 -0.28 1.44 16 10 C 0.12 -0.26 4.32 -67.12 -0.29 -0.55 16 11 H 0.11 -0.04 7.46 -51.93 -0.39 -0.42 16 12 C -0.14 0.37 7.25 -25.91 -0.19 0.19 16 13 C -0.08 0.22 3.78 -90.96 -0.34 -0.12 16 14 H 0.10 -0.32 7.44 -51.93 -0.39 -0.70 16 15 C -0.12 0.18 5.29 -104.55 -0.55 -0.37 16 16 C 0.13 -0.02 7.24 -39.43 -0.29 -0.30 16 17 F -0.13 -0.08 16.36 2.25 0.04 -0.04 16 18 C -0.19 0.01 10.01 -39.45 -0.39 -0.39 16 19 C 0.13 0.02 7.30 -39.43 -0.29 -0.26 16 20 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 21 C -0.16 0.23 10.03 -39.50 -0.40 -0.16 16 22 C -0.06 0.14 8.61 -39.60 -0.34 -0.20 16 23 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 24 C -0.17 0.10 9.04 -39.46 -0.36 -0.26 16 25 C -0.11 0.10 8.66 -39.57 -0.34 -0.25 16 26 C -0.11 -0.02 5.39 -104.61 -0.56 -0.58 16 27 C -0.07 0.03 2.82 36.01 0.10 0.13 16 28 O -0.54 0.04 12.77 -35.23 -0.45 -0.41 16 29 Si 0.69 -1.07 29.78 -169.99 -5.06 -6.13 16 30 C -0.15 -0.20 8.60 -39.46 -0.34 -0.54 16 31 H 0.10 -0.11 8.14 -51.93 -0.42 -0.54 16 32 H 0.06 -0.05 7.65 -51.93 -0.40 -0.44 16 33 H 0.06 -0.05 7.67 -51.93 -0.40 -0.45 16 34 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 35 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 36 H 0.40 -2.18 8.70 -40.82 -0.36 -2.54 16 37 H 0.10 -0.33 6.31 -51.93 -0.33 -0.66 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 40 H 0.14 -0.44 8.06 -52.49 -0.42 -0.86 16 41 H 0.15 -0.66 6.66 -52.49 -0.35 -1.01 16 42 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.10 -0.41 7.72 -51.93 -0.40 -0.81 16 44 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 45 H 0.13 -0.40 4.87 -52.49 -0.26 -0.65 16 46 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 47 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 48 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 49 H -0.26 -0.16 7.11 56.52 0.40 0.25 16 50 H 0.14 0.07 6.30 -52.49 -0.33 -0.26 16 LS Contribution 423.07 15.07 6.38 6.38 Total: 0.00 -11.39 423.07 -10.62 -22.01 By element: Atomic # 1 Polarization: -8.87 SS G_CDS: -6.04 Total: -14.91 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -4.20 Total: -1.77 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -0.28 Total: 1.44 kcal Atomic # 8 Polarization: -5.33 SS G_CDS: -1.48 Total: -6.81 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.08 Total: -0.21 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.13 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -11.39 -10.62 -22.01 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.804 kcal (2) G-P(sol) polarization free energy of solvation -11.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.616 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds