Wall clock time and date at job start Sun Mar 7 2021 00:09:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38681 * 119.95165 * 359.97205 * 6 5 4 8 8 O 1.35917 * 120.05777 * 180.02562 * 7 6 5 9 9 C 1.42896 * 116.99851 * 0.02562 * 8 7 6 10 10 C 1.50703 * 109.46846 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00227 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99861 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99748 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.84966 * 336.19018 * 13 12 10 15 15 C 1.53777 * 113.61661 * 107.49792 * 13 12 10 16 16 C 1.53788 * 87.08150 * 89.11501 * 15 13 12 17 17 H 1.09002 * 113.68740 * 270.87598 * 16 15 13 18 18 C 1.50702 * 113.61446 * 139.98379 * 16 15 13 19 19 C 1.38453 * 119.98618 * 142.22941 * 18 16 15 20 20 F 1.35094 * 120.01296 * 0.02562 * 19 18 16 21 21 C 1.38445 * 119.97115 * 179.76716 * 19 18 16 22 22 C 1.38394 * 119.94762 * 0.48228 * 21 19 18 23 23 F 1.35103 * 120.00969 * 179.79250 * 22 21 19 24 24 C 1.38495 * 119.98013 * 359.76646 * 22 21 19 25 25 C 1.38193 * 120.02258 * 0.02562 * 24 22 21 26 26 C 1.53779 * 87.08119 * 25.43230 * 16 15 13 27 27 C 1.38830 * 119.88032 * 0.02562 * 7 6 5 28 28 Br 1.89111 * 120.03419 * 180.02562 * 27 7 6 29 29 C 1.38193 * 119.93151 * 359.76266 * 27 7 6 30 30 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 31 31 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 32 32 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 33 33 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 34 34 H 1.08008 * 119.96214 * 359.97438 * 5 4 2 35 35 H 1.07995 * 120.02734 * 179.97438 * 6 5 4 36 36 H 1.09004 * 109.47307 * 299.99653 * 9 8 7 37 37 H 1.09001 * 109.47449 * 60.00236 * 9 8 7 38 38 H 0.97000 * 120.00562 * 359.97438 * 12 10 9 39 39 H 1.08999 * 113.61705 * 203.66473 * 15 13 12 40 40 H 1.09006 * 113.61556 * 334.56949 * 15 13 12 41 41 H 1.07992 * 120.02280 * 180.25275 * 21 19 18 42 42 H 1.07993 * 119.99304 * 179.97438 * 24 22 21 43 43 H 1.07992 * 119.97353 * 179.97438 * 25 24 22 44 44 H 1.08992 * 113.61863 * 220.02140 * 26 16 15 45 45 H 1.08998 * 113.68903 * 89.12638 * 26 16 15 46 46 H 1.07999 * 119.97803 * 180.23619 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3061 -2.6568 -4.5991 9 6 2.9213 -4.0234 -4.7610 10 6 3.5126 -4.5638 -6.0374 11 8 4.1958 -3.8489 -6.7396 12 7 3.2813 -5.8414 -6.3993 13 6 3.8566 -6.3669 -7.6399 14 1 4.0825 -5.5858 -8.3658 15 6 5.0146 -7.3529 -7.4127 16 6 3.9543 -8.4661 -7.3701 17 1 3.5523 -8.6501 -6.3737 18 6 4.3776 -9.7302 -8.0730 19 6 4.0316 -10.9634 -7.5472 20 9 3.3143 -11.0336 -6.4046 21 6 4.4165 -12.1244 -8.1958 22 6 5.1554 -12.0508 -9.3637 23 9 5.5352 -13.1831 -9.9954 24 6 5.5047 -10.8162 -9.8850 25 6 5.1163 -9.6579 -9.2391 26 6 3.0702 -7.5488 -8.2313 27 6 3.1884 -0.6865 -3.2689 28 35 4.2748 0.2348 -4.5128 29 6 2.7226 -0.0357 -2.1423 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5616 2.4678 1.2086 33 1 3.5346 1.7703 -0.0322 34 1 0.9758 -2.5574 -0.7361 35 1 1.7943 -3.7220 -2.7445 36 1 3.2874 -4.6065 -3.9160 37 1 1.8343 -4.0919 -4.8061 38 1 2.7345 -6.4131 -5.8379 39 1 5.6950 -7.4302 -8.2607 40 1 5.5327 -7.2070 -6.4648 41 1 4.1436 -13.0866 -7.7886 42 1 6.0816 -10.7586 -10.7961 43 1 5.3895 -8.6957 -9.6461 44 1 2.0188 -7.5609 -7.9444 45 1 3.2179 -7.6788 -9.3033 46 1 2.9796 0.9993 -1.9719 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:55 Heat of formation + Delta-G solvation = -97.976065 kcal Electronic energy + Delta-G solvation = -34266.776177 eV Core-core repulsion = 29000.022477 eV Total energy + Delta-G solvation = -5266.753700 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.042 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -50.10771 -50.03649 -41.91254 -41.45420 -40.33762 -39.32102 -38.61769 -37.28707 -34.76892 -33.50714 -32.27754 -32.03495 -31.69967 -30.45346 -29.54596 -26.97999 -26.59043 -26.15242 -24.49627 -24.08451 -23.05379 -22.53165 -21.95546 -20.48543 -19.63606 -19.41113 -18.69895 -18.31522 -18.13187 -17.69158 -17.55773 -17.07714 -17.04623 -16.95229 -16.66048 -16.55150 -16.37164 -16.11020 -15.79112 -15.71421 -15.60599 -15.50631 -15.31634 -14.90504 -14.79019 -14.32784 -14.27965 -14.09737 -13.99413 -13.86284 -13.68725 -13.60439 -13.47729 -12.95421 -12.69575 -12.52199 -12.34479 -12.25153 -12.19148 -11.91838 -11.85299 -11.82106 -11.52419 -11.07869 -10.99862 -10.54256 -10.31068 -10.19976 -10.03914 -9.69668 -9.34085 -5.09517 -0.22587 -0.14887 -0.09182 0.01172 0.68323 1.21243 1.23791 1.37005 1.57415 1.91846 2.15792 2.32186 2.33234 2.73735 3.11801 3.28057 3.30364 3.34300 3.35743 3.42356 3.42899 3.49316 3.61463 3.64547 3.66365 3.74557 3.78268 3.81860 3.87450 3.97950 4.01664 4.24278 4.36350 4.39305 4.47105 4.50729 4.55900 4.61288 4.66696 4.70774 4.71825 4.77878 4.79950 4.87789 4.92284 4.92990 5.08820 5.20529 5.32227 5.37536 5.61071 5.93218 6.21700 6.47900 6.98380 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.060 4.060 3 Si 0.679 3.321 4 C -0.152 4.152 5 C -0.035 4.035 6 C -0.204 4.204 7 C 0.161 3.839 8 O -0.274 6.274 9 C 0.037 3.963 10 C 0.519 3.481 11 O -0.503 6.503 12 N -0.711 5.711 13 C 0.123 3.877 14 H 0.111 0.889 15 C -0.143 4.143 16 C -0.075 4.075 17 H 0.104 0.896 18 C -0.116 4.116 19 C 0.133 3.867 20 F -0.129 7.129 21 C -0.190 4.190 22 C 0.128 3.872 23 F -0.130 7.130 24 C -0.159 4.159 25 C -0.060 4.060 26 C -0.134 4.134 27 C -0.119 4.119 28 Br -0.023 7.023 29 C -0.050 4.050 30 H 0.380 0.620 31 H 0.117 0.883 32 H -0.250 1.250 33 H -0.254 1.254 34 H 0.138 0.862 35 H 0.139 0.861 36 H 0.098 0.902 37 H 0.099 0.901 38 H 0.403 0.597 39 H 0.099 0.901 40 H 0.078 0.922 41 H 0.149 0.851 42 H 0.145 0.855 43 H 0.146 0.854 44 H 0.080 0.920 45 H 0.102 0.898 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.289 -1.758 -0.403 3.751 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.171 4.171 3 Si 0.580 3.420 4 C -0.153 4.153 5 C -0.053 4.053 6 C -0.224 4.224 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.041 4.041 10 C 0.304 3.696 11 O -0.376 6.376 12 N -0.365 5.365 13 C 0.017 3.983 14 H 0.129 0.871 15 C -0.181 4.181 16 C -0.094 4.094 17 H 0.122 0.878 18 C -0.117 4.117 19 C 0.114 3.886 20 F -0.107 7.107 21 C -0.209 4.209 22 C 0.108 3.892 23 F -0.108 7.108 24 C -0.178 4.178 25 C -0.078 4.078 26 C -0.172 4.172 27 C -0.199 4.199 28 Br 0.062 6.938 29 C -0.069 4.069 30 H 0.228 0.772 31 H 0.134 0.866 32 H -0.175 1.175 33 H -0.178 1.178 34 H 0.155 0.845 35 H 0.157 0.843 36 H 0.115 0.885 37 H 0.116 0.884 38 H 0.238 0.762 39 H 0.117 0.883 40 H 0.097 0.903 41 H 0.167 0.833 42 H 0.163 0.837 43 H 0.163 0.837 44 H 0.099 0.901 45 H 0.121 0.879 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.681 -0.540 -0.552 1.850 hybrid contribution -0.581 -1.855 0.950 2.163 sum -2.262 -2.394 0.398 3.318 Atomic orbital electron populations 1.86507 1.16952 1.81642 1.49377 1.24928 0.85291 1.09907 0.97003 0.94781 0.81464 0.78109 0.87598 1.20256 1.01513 0.95540 0.98001 1.20941 0.95513 0.93279 0.95611 1.21289 1.03167 1.01284 0.96628 1.18627 0.92916 0.90788 0.86428 1.86277 1.69540 1.23774 1.38908 1.22540 1.01230 0.82750 0.97626 1.19945 0.81126 0.81969 0.86597 1.90814 1.36765 1.57147 1.52850 1.45471 1.54108 1.11933 1.25017 1.21848 0.94160 0.95782 0.86477 0.87140 1.23597 0.96584 0.94035 1.03903 1.21568 0.98103 0.90284 0.99410 0.87809 1.19785 1.01277 0.93347 0.97262 1.17135 0.94487 0.93100 0.83900 1.91524 1.75199 1.97069 1.46941 1.21084 1.03304 0.99624 0.96936 1.17346 0.97388 0.82558 0.91863 1.91564 1.89100 1.49122 1.81031 1.21266 1.03358 0.90712 1.02425 1.20780 0.95097 0.98746 0.93158 1.23449 0.99483 0.93512 1.00730 1.20993 1.06682 0.93283 0.98936 1.96818 1.65599 1.74638 1.56722 1.20857 0.95291 0.99410 0.91361 0.77230 0.86595 1.17490 1.17838 0.84451 0.84303 0.88466 0.88361 0.76215 0.88285 0.90316 0.83298 0.83719 0.83650 0.90107 0.87944 0.84055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.47 12.77 -35.23 -0.45 0.03 16 2 C -0.06 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.68 -0.87 29.78 -169.99 -5.06 -5.94 16 4 C -0.15 0.11 5.39 -104.60 -0.56 -0.46 16 5 C -0.03 0.04 9.60 -39.60 -0.38 -0.34 16 6 C -0.20 0.27 9.04 -39.44 -0.36 -0.09 16 7 C 0.16 0.16 6.68 -39.20 -0.26 -0.10 16 8 O -0.27 -0.51 9.01 -39.39 -0.35 -0.86 16 9 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 10 C 0.52 0.05 7.91 -10.98 -0.09 -0.04 16 11 O -0.50 -2.56 16.10 -14.36 -0.23 -2.80 16 12 N -0.71 2.12 5.26 -53.01 -0.28 1.84 16 13 C 0.12 -0.31 4.32 -67.12 -0.29 -0.60 16 14 H 0.11 -0.09 7.46 -51.93 -0.39 -0.48 16 15 C -0.14 0.41 7.25 -25.92 -0.19 0.23 16 16 C -0.08 0.24 3.78 -90.96 -0.34 -0.11 16 17 H 0.10 -0.34 7.44 -51.93 -0.39 -0.72 16 18 C -0.12 0.20 5.30 -104.54 -0.55 -0.36 16 19 C 0.13 -0.03 7.25 -39.43 -0.29 -0.32 16 20 F -0.13 -0.07 16.36 2.25 0.04 -0.03 16 21 C -0.19 0.02 10.01 -39.45 -0.39 -0.37 16 22 C 0.13 0.01 7.30 -39.43 -0.29 -0.27 16 23 F -0.13 -0.20 17.27 2.25 0.04 -0.16 16 24 C -0.16 0.25 10.03 -39.50 -0.40 -0.15 16 25 C -0.06 0.15 8.61 -39.60 -0.34 -0.19 16 26 C -0.13 0.52 7.29 -25.92 -0.19 0.33 16 27 C -0.12 -0.20 6.24 -39.38 -0.25 -0.45 16 28 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.32 16 29 C -0.05 0.00 8.40 -39.58 -0.33 -0.34 16 30 H 0.38 -1.73 8.70 45.56 0.40 -1.33 16 31 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 33 H -0.25 -0.29 7.11 56.52 0.40 0.12 16 34 H 0.14 -0.32 8.06 -52.48 -0.42 -0.75 16 35 H 0.14 -0.58 6.30 -52.49 -0.33 -0.91 16 36 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 37 H 0.10 -0.47 7.66 -51.93 -0.40 -0.87 16 38 H 0.40 -2.36 8.70 -40.82 -0.36 -2.72 16 39 H 0.10 -0.36 6.31 -51.93 -0.33 -0.68 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.15 -0.16 8.06 -52.49 -0.42 -0.59 16 42 H 0.14 -0.45 8.06 -52.49 -0.42 -0.88 16 43 H 0.15 -0.69 6.65 -52.49 -0.35 -1.04 16 44 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 45 H 0.10 -0.44 7.73 -51.93 -0.40 -0.84 16 46 H 0.14 -0.17 4.87 -52.49 -0.26 -0.43 16 LS Contribution 414.25 15.07 6.24 6.24 Total: 0.00 -9.77 414.25 -12.44 -22.21 By element: Atomic # 1 Polarization: -9.96 SS G_CDS: -4.92 Total: -14.88 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -5.21 Total: -3.33 kcal Atomic # 7 Polarization: 2.12 SS G_CDS: -0.28 Total: 1.84 kcal Atomic # 8 Polarization: -2.60 SS G_CDS: -1.04 Total: -3.63 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.08 Total: -0.19 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.06 Total: -5.94 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.26 Total: -2.32 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -9.77 -12.44 -22.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.763 kcal (2) G-P(sol) polarization free energy of solvation -9.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.536 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.213 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds