Wall clock time and date at job start Sun Mar 7 2021 00:09:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38681 * 119.95165 * 359.97205 * 6 5 4 8 8 O 1.35917 * 120.05777 * 180.02562 * 7 6 5 9 9 C 1.42896 * 116.99851 * 0.02562 * 8 7 6 10 10 C 1.50703 * 109.46846 * 180.02562 * 9 8 7 11 11 O 1.21283 * 120.00227 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99861 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99748 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.84966 * 336.19018 * 13 12 10 15 15 C 1.53777 * 113.61661 * 107.49792 * 13 12 10 16 16 C 1.53788 * 87.08150 * 89.11501 * 15 13 12 17 17 H 1.09002 * 113.68740 * 270.87598 * 16 15 13 18 18 C 1.50702 * 113.61446 * 139.98379 * 16 15 13 19 19 C 1.38453 * 119.98618 * 142.22941 * 18 16 15 20 20 F 1.35094 * 120.01296 * 0.02562 * 19 18 16 21 21 C 1.38445 * 119.97115 * 179.76716 * 19 18 16 22 22 C 1.38394 * 119.94762 * 0.48228 * 21 19 18 23 23 F 1.35103 * 120.00969 * 179.79250 * 22 21 19 24 24 C 1.38495 * 119.98013 * 359.76646 * 22 21 19 25 25 C 1.38193 * 120.02258 * 0.02562 * 24 22 21 26 26 C 1.53779 * 87.08119 * 25.43230 * 16 15 13 27 27 C 1.38830 * 119.88032 * 0.02562 * 7 6 5 28 28 Br 1.89111 * 120.03419 * 180.02562 * 27 7 6 29 29 C 1.38193 * 119.93151 * 359.76266 * 27 7 6 30 30 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 31 31 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 32 32 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 33 33 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 34 34 H 1.08008 * 119.96214 * 359.97438 * 5 4 2 35 35 H 1.07995 * 120.02734 * 179.97438 * 6 5 4 36 36 H 1.09004 * 109.47307 * 299.99653 * 9 8 7 37 37 H 1.09001 * 109.47449 * 60.00236 * 9 8 7 38 38 H 0.97000 * 120.00562 * 359.97438 * 12 10 9 39 39 H 1.08999 * 113.61705 * 203.66473 * 15 13 12 40 40 H 1.09006 * 113.61556 * 334.56949 * 15 13 12 41 41 H 1.07992 * 120.02280 * 180.25275 * 21 19 18 42 42 H 1.07993 * 119.99304 * 179.97438 * 24 22 21 43 43 H 1.07992 * 119.97353 * 179.97438 * 25 24 22 44 44 H 1.08992 * 113.61863 * 220.02140 * 26 16 15 45 45 H 1.08998 * 113.68903 * 89.12638 * 26 16 15 46 46 H 1.07999 * 119.97803 * 180.23619 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3061 -2.6568 -4.5991 9 6 2.9213 -4.0234 -4.7610 10 6 3.5126 -4.5638 -6.0374 11 8 4.1958 -3.8489 -6.7396 12 7 3.2813 -5.8414 -6.3993 13 6 3.8566 -6.3669 -7.6399 14 1 4.0825 -5.5858 -8.3658 15 6 5.0146 -7.3529 -7.4127 16 6 3.9543 -8.4661 -7.3701 17 1 3.5523 -8.6501 -6.3737 18 6 4.3776 -9.7302 -8.0730 19 6 4.0316 -10.9634 -7.5472 20 9 3.3143 -11.0336 -6.4046 21 6 4.4165 -12.1244 -8.1958 22 6 5.1554 -12.0508 -9.3637 23 9 5.5352 -13.1831 -9.9954 24 6 5.5047 -10.8162 -9.8850 25 6 5.1163 -9.6579 -9.2391 26 6 3.0702 -7.5488 -8.2313 27 6 3.1884 -0.6865 -3.2689 28 35 4.2748 0.2348 -4.5128 29 6 2.7226 -0.0357 -2.1423 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5616 2.4678 1.2086 33 1 3.5346 1.7703 -0.0322 34 1 0.9758 -2.5574 -0.7361 35 1 1.7943 -3.7220 -2.7445 36 1 3.2874 -4.6065 -3.9160 37 1 1.8343 -4.0919 -4.8061 38 1 2.7345 -6.4131 -5.8379 39 1 5.6950 -7.4302 -8.2607 40 1 5.5327 -7.2070 -6.4648 41 1 4.1436 -13.0866 -7.7886 42 1 6.0816 -10.7586 -10.7961 43 1 5.3895 -8.6957 -9.6461 44 1 2.0188 -7.5609 -7.9444 45 1 3.2179 -7.6788 -9.3033 46 1 2.9796 0.9993 -1.9719 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13428180_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:09:53 Heat of formation + Delta-G solvation = -94.770328 kcal Electronic energy + Delta-G solvation = -34266.637165 eV Core-core repulsion = 29000.022477 eV Total energy + Delta-G solvation = -5266.614688 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.042 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -50.07588 -50.04906 -41.80788 -41.32900 -40.27023 -39.22657 -38.54305 -37.19930 -34.69472 -33.48538 -32.18464 -31.92138 -31.58398 -30.43237 -29.42796 -26.72268 -26.49017 -26.00429 -24.37854 -23.99554 -22.93919 -22.45477 -21.85144 -20.30916 -19.52879 -19.34997 -18.60605 -18.23409 -18.03043 -17.57527 -17.45010 -17.05045 -16.93740 -16.82380 -16.57239 -16.46767 -16.37551 -16.01047 -15.70129 -15.64576 -15.55639 -15.42482 -15.19658 -14.79964 -14.74930 -14.28737 -14.13525 -14.02634 -13.85317 -13.71985 -13.56651 -13.44109 -13.39662 -12.84863 -12.56509 -12.42406 -12.24134 -12.19124 -12.05097 -11.86031 -11.85476 -11.73071 -11.32052 -11.19665 -11.01401 -10.46235 -10.18258 -10.08717 -9.99402 -9.59950 -9.30804 -5.03224 -0.13068 -0.03791 -0.03117 0.08502 0.64098 1.28873 1.39122 1.43731 1.59432 1.93201 2.27657 2.40382 2.48966 2.81904 3.29810 3.44458 3.45665 3.49352 3.50454 3.56246 3.64322 3.67740 3.79281 3.83299 3.87000 3.93308 4.03287 4.07554 4.08401 4.09371 4.17527 4.34775 4.46505 4.60321 4.62716 4.69635 4.74666 4.79116 4.82883 4.84877 4.90595 4.91184 5.01096 5.03911 5.07748 5.11368 5.25605 5.30505 5.45798 5.56315 5.72272 6.05453 6.43372 6.77608 7.12617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.053 4.053 3 Si 0.745 3.255 4 C -0.151 4.151 5 C -0.034 4.034 6 C -0.195 4.195 7 C 0.150 3.850 8 O -0.303 6.303 9 C 0.032 3.968 10 C 0.516 3.484 11 O -0.564 6.564 12 N -0.695 5.695 13 C 0.116 3.884 14 H 0.091 0.909 15 C -0.140 4.140 16 C -0.071 4.071 17 H 0.107 0.893 18 C -0.111 4.111 19 C 0.117 3.883 20 F -0.136 7.136 21 C -0.199 4.199 22 C 0.106 3.894 23 F -0.143 7.143 24 C -0.156 4.156 25 C -0.056 4.056 26 C -0.122 4.122 27 C -0.139 4.139 28 Br -0.049 7.049 29 C -0.056 4.056 30 H 0.396 0.604 31 H 0.118 0.882 32 H -0.293 1.293 33 H -0.289 1.289 34 H 0.155 0.845 35 H 0.172 0.828 36 H 0.127 0.873 37 H 0.131 0.869 38 H 0.420 0.580 39 H 0.107 0.893 40 H 0.069 0.931 41 H 0.150 0.850 42 H 0.161 0.839 43 H 0.171 0.829 44 H 0.089 0.911 45 H 0.110 0.890 46 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.671 -2.718 0.008 5.404 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.165 4.165 3 Si 0.652 3.348 4 C -0.153 4.153 5 C -0.052 4.052 6 C -0.214 4.214 7 C 0.102 3.898 8 O -0.215 6.215 9 C -0.045 4.045 10 C 0.302 3.698 11 O -0.441 6.441 12 N -0.349 5.349 13 C 0.011 3.989 14 H 0.109 0.891 15 C -0.178 4.178 16 C -0.089 4.089 17 H 0.125 0.875 18 C -0.112 4.112 19 C 0.098 3.902 20 F -0.115 7.115 21 C -0.218 4.218 22 C 0.087 3.913 23 F -0.122 7.122 24 C -0.175 4.175 25 C -0.074 4.074 26 C -0.160 4.160 27 C -0.219 4.219 28 Br 0.036 6.964 29 C -0.075 4.075 30 H 0.246 0.754 31 H 0.135 0.865 32 H -0.220 1.220 33 H -0.216 1.216 34 H 0.173 0.827 35 H 0.190 0.810 36 H 0.145 0.855 37 H 0.148 0.852 38 H 0.258 0.742 39 H 0.125 0.875 40 H 0.088 0.912 41 H 0.168 0.832 42 H 0.178 0.822 43 H 0.188 0.812 44 H 0.108 0.892 45 H 0.129 0.871 46 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -3.107 -1.547 -0.146 3.474 hybrid contribution -0.161 -1.572 0.860 1.800 sum -3.268 -3.119 0.714 4.574 Atomic orbital electron populations 1.86475 1.16757 1.81971 1.50625 1.24828 0.85439 1.09297 0.96900 0.93976 0.78399 0.76990 0.85436 1.20298 1.01260 0.96007 0.97720 1.21199 0.95176 0.92973 0.95853 1.21602 1.01693 1.02560 0.95528 1.18794 0.93526 0.90654 0.86858 1.86239 1.70239 1.25638 1.39430 1.22834 1.03019 0.81449 0.97219 1.20441 0.80234 0.82237 0.86842 1.90791 1.39687 1.58787 1.54859 1.45370 1.53364 1.11273 1.24882 1.21854 0.95031 0.95568 0.86440 0.89074 1.23600 0.96593 0.93816 1.03827 1.21566 0.98157 0.89522 0.99663 0.87453 1.19982 1.00676 0.93268 0.97323 1.17287 0.95235 0.93642 0.84041 1.91500 1.75479 1.97138 1.47342 1.21172 1.03527 1.00008 0.97136 1.17579 0.98504 0.82818 0.92391 1.91525 1.89393 1.49925 1.81313 1.21517 1.02853 0.90262 1.02819 1.21072 0.94235 0.99476 0.92615 1.23412 0.99656 0.91862 1.01021 1.21135 1.07540 0.94034 0.99230 1.96775 1.66521 1.75206 1.57853 1.20922 0.95559 0.99767 0.91232 0.75383 0.86484 1.22023 1.21574 0.82738 0.81039 0.85512 0.85159 0.74235 0.87477 0.91207 0.83187 0.82172 0.81202 0.89221 0.87147 0.83665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.74 12.77 -148.98 -1.90 -0.16 16 2 C -0.05 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.74 -1.47 29.78 68.60 2.04 0.57 16 4 C -0.15 0.36 5.39 -19.85 -0.11 0.26 16 5 C -0.03 0.15 9.60 22.26 0.21 0.37 16 6 C -0.19 0.97 9.04 22.36 0.20 1.17 16 7 C 0.15 0.22 6.68 22.52 0.15 0.37 16 8 O -0.30 -1.08 9.01 -73.58 -0.66 -1.75 16 9 C 0.03 -0.19 5.22 71.24 0.37 0.19 16 10 C 0.52 0.00 7.91 87.66 0.69 0.69 16 11 O -0.56 -6.58 16.10 16.00 0.26 -6.32 16 12 N -0.69 4.80 5.26 -440.02 -2.32 2.48 16 13 C 0.12 -0.65 4.32 45.52 0.20 -0.46 16 14 H 0.09 -0.09 7.46 -2.39 -0.02 -0.11 16 15 C -0.14 0.91 7.25 31.12 0.23 1.14 16 16 C -0.07 0.53 3.78 -11.01 -0.04 0.49 16 17 H 0.11 -0.85 7.44 -2.39 -0.02 -0.87 16 18 C -0.11 0.48 5.30 -19.81 -0.10 0.37 16 19 C 0.12 -0.06 7.25 22.37 0.16 0.11 16 20 F -0.14 -0.14 16.36 44.97 0.74 0.59 16 21 C -0.20 -0.09 10.01 22.36 0.22 0.13 16 22 C 0.11 0.07 7.30 22.37 0.16 0.24 16 23 F -0.14 -0.57 17.27 44.97 0.78 0.20 16 24 C -0.16 0.58 10.03 22.32 0.22 0.80 16 25 C -0.06 0.35 8.61 22.26 0.19 0.55 16 26 C -0.12 1.12 7.29 31.12 0.23 1.35 16 27 C -0.14 -0.54 6.24 22.40 0.14 -0.40 16 28 Br -0.05 -0.36 33.16 -20.37 -0.68 -1.04 16 29 C -0.06 -0.02 8.40 22.27 0.19 0.17 16 30 H 0.40 -4.18 8.70 -74.05 -0.64 -4.82 16 31 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 32 H -0.29 -1.49 7.11 99.48 0.71 -0.78 16 33 H -0.29 -1.08 7.11 99.48 0.71 -0.37 16 34 H 0.15 -1.21 8.06 -2.91 -0.02 -1.23 16 35 H 0.17 -2.11 6.30 -2.91 -0.02 -2.13 16 36 H 0.13 -1.52 7.66 -2.38 -0.02 -1.54 16 37 H 0.13 -1.63 7.66 -2.39 -0.02 -1.65 16 38 H 0.42 -5.76 8.70 -92.71 -0.81 -6.57 16 39 H 0.11 -0.88 6.31 -2.39 -0.02 -0.90 16 40 H 0.07 -0.30 8.14 -2.38 -0.02 -0.32 16 41 H 0.15 -0.14 8.06 -2.91 -0.02 -0.16 16 42 H 0.16 -1.17 8.06 -2.91 -0.02 -1.19 16 43 H 0.17 -1.95 6.65 -2.91 -0.02 -1.97 16 44 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 45 H 0.11 -1.14 7.73 -2.39 -0.02 -1.16 16 46 H 0.15 -0.23 4.87 -2.91 -0.01 -0.25 16 Total: 0.00 -26.34 414.25 1.45 -24.88 By element: Atomic # 1 Polarization: -27.02 SS G_CDS: -0.32 Total: -27.34 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: 3.52 Total: 7.89 kcal Atomic # 7 Polarization: 4.80 SS G_CDS: -2.32 Total: 2.48 kcal Atomic # 8 Polarization: -5.93 SS G_CDS: -2.31 Total: -8.24 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 1.51 Total: 0.80 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: 2.04 Total: 0.57 kcal Atomic # 35 Polarization: -0.36 SS G_CDS: -0.68 Total: -1.04 kcal Total: -26.34 1.45 -24.88 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.888 kcal (2) G-P(sol) polarization free energy of solvation -26.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.224 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.882 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds