Wall clock time and date at job start Sun Mar 7 2021 00:10:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86306 * 109.46981 * 2 1 4 4 C 1.50704 * 109.47306 * 240.00334 * 2 1 3 5 5 C 1.35456 * 125.56293 * 119.97284 * 4 2 1 6 6 C 1.39834 * 107.86157 * 180.02562 * 5 4 2 7 7 C 1.37877 * 107.08815 * 0.02562 * 6 5 4 8 8 C 1.46679 * 126.23636 * 179.97438 * 7 6 5 9 9 O 1.21693 * 119.99680 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00079 * 180.02562 * 8 7 6 11 11 C 1.46495 * 119.99987 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.85302 * 336.19107 * 11 10 8 13 13 C 1.53783 * 113.69591 * 107.46287 * 11 10 8 14 14 C 1.53782 * 87.07977 * 89.12369 * 13 11 10 15 15 H 1.08994 * 113.69133 * 270.87053 * 14 13 11 16 16 C 1.50703 * 113.60819 * 139.98487 * 14 13 11 17 17 C 1.38185 * 119.98980 * 322.49837 * 16 14 13 18 18 C 1.38232 * 120.04918 * 180.02562 * 17 16 14 19 19 C 1.38447 * 120.02761 * 359.97438 * 18 17 16 20 20 F 1.35095 * 120.01281 * 180.02562 * 19 18 17 21 21 C 1.38445 * 119.97471 * 0.02562 * 19 18 17 22 22 C 1.38398 * 119.94690 * 0.28137 * 21 19 18 23 23 F 1.35104 * 120.00972 * 179.71479 * 22 21 19 24 24 C 1.53782 * 87.08260 * 25.43603 * 14 13 11 25 25 N 1.35535 * 125.56006 * 300.28282 * 4 2 1 26 26 H 0.96701 * 113.99964 * 59.99705 * 1 2 3 27 27 H 1.08997 * 109.47245 * 120.00114 * 2 1 3 28 28 H 1.48504 * 110.00212 * 298.68226 * 3 2 1 29 29 H 1.48497 * 109.99675 * 60.00112 * 3 2 1 30 30 H 1.07994 * 126.06750 * 0.02562 * 5 4 2 31 31 H 1.07996 * 126.46118 * 179.97438 * 6 5 4 32 32 H 0.97002 * 120.00265 * 359.97438 * 10 8 7 33 33 H 1.09006 * 113.60778 * 334.57647 * 13 11 10 34 34 H 1.08994 * 113.61707 * 203.67993 * 13 11 10 35 35 H 1.08002 * 119.97601 * 0.04966 * 17 16 14 36 36 H 1.08001 * 119.98496 * 180.02562 * 18 17 16 37 37 H 1.08002 * 120.02257 * 179.97438 * 21 19 18 38 38 H 1.08997 * 113.61331 * 89.11476 * 24 14 13 39 39 H 1.09000 * 113.61450 * 220.01699 * 24 14 13 40 40 H 0.96994 * 125.68034 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7130 -0.1633 -2.1921 6 6 2.9563 -1.1454 -3.1573 7 6 2.3013 -2.2873 -2.7474 8 6 2.2771 -3.5733 -3.4524 9 8 2.8755 -3.7019 -4.5042 10 7 1.5922 -4.6125 -2.9354 11 6 1.5685 -5.8970 -3.6392 12 1 1.7614 -5.7981 -4.7074 13 6 2.4109 -6.9896 -2.9598 14 6 1.1519 -7.3482 -2.1528 15 1 1.0553 -6.7906 -1.2212 16 6 0.9538 -8.8310 -1.9705 17 6 1.2686 -9.7011 -2.9968 18 6 1.0869 -11.0614 -2.8312 19 6 0.5897 -11.5536 -1.6365 20 9 0.4127 -12.8831 -1.4747 21 6 0.2740 -10.6827 -0.6076 22 6 0.4503 -9.3205 -0.7768 23 9 0.1372 -8.4691 0.2244 24 6 0.3349 -6.7555 -3.3130 25 7 1.6699 -1.9991 -1.5586 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8899 28 1 1.5878 2.4587 -1.2242 29 1 1.5614 2.4678 1.2085 30 1 3.0826 0.8513 -2.2100 31 1 3.5456 -1.0309 -4.0550 32 1 1.1155 -4.5101 -2.0968 33 1 3.2240 -6.5973 -2.3491 34 1 2.7332 -7.7783 -3.6395 35 1 1.6573 -9.3182 -3.9289 36 1 1.3337 -11.7406 -3.6338 37 1 -0.1143 -11.0658 0.3246 38 1 0.0897 -7.4803 -4.0893 39 1 -0.5278 -6.1743 -2.9874 40 1 1.1290 -2.6161 -1.0413 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:05 Heat of formation + Delta-G solvation = -56.283735 kcal Electronic energy + Delta-G solvation = -27526.587532 eV Core-core repulsion = 23138.479791 eV Total energy + Delta-G solvation = -4388.107741 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.112 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.10289 -50.03455 -42.58551 -41.51548 -40.02563 -38.71866 -37.90714 -34.76873 -32.34297 -31.98373 -31.71542 -31.13915 -27.29887 -26.96763 -26.09682 -24.46054 -23.59523 -22.83681 -21.66517 -21.18653 -20.41099 -19.99415 -19.35250 -18.39221 -18.21574 -17.48912 -17.08009 -17.01965 -16.77267 -16.66519 -16.38798 -16.37039 -16.05471 -15.59581 -15.47396 -15.40329 -15.18842 -14.95487 -14.60357 -14.39283 -14.11985 -13.99684 -13.91303 -13.69638 -13.68425 -13.56063 -12.94043 -12.69016 -12.40297 -12.24962 -11.94994 -11.91034 -11.50978 -11.27813 -10.91963 -10.30237 -10.19661 -10.11109 -9.69359 -9.30572 -5.00563 -0.22204 -0.14534 0.31417 1.07835 1.52567 1.57325 1.78952 1.89214 2.10663 2.16062 2.32386 2.74056 3.12598 3.15401 3.30746 3.34187 3.43537 3.48850 3.50210 3.65767 3.73584 3.76140 3.87599 4.02062 4.20214 4.24284 4.36943 4.40687 4.47946 4.56863 4.62885 4.67434 4.72156 4.78720 4.81083 4.88970 4.92603 4.96991 5.05152 5.10241 5.37217 5.55496 5.61410 5.79119 6.14161 6.19307 6.35200 7.05321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.024 3.976 5 C -0.199 4.199 6 C -0.096 4.096 7 C -0.052 4.052 8 C 0.594 3.406 9 O -0.521 6.521 10 N -0.716 5.716 11 C 0.122 3.878 12 H 0.112 0.888 13 C -0.142 4.142 14 C -0.076 4.076 15 H 0.102 0.898 16 C -0.115 4.115 17 C -0.060 4.060 18 C -0.159 4.159 19 C 0.128 3.872 20 F -0.130 7.130 21 C -0.190 4.190 22 C 0.133 3.867 23 F -0.129 7.129 24 C -0.135 4.135 25 N -0.524 5.524 26 H 0.380 0.620 27 H 0.120 0.880 28 H -0.255 1.255 29 H -0.256 1.256 30 H 0.152 0.848 31 H 0.154 0.846 32 H 0.395 0.605 33 H 0.078 0.922 34 H 0.099 0.901 35 H 0.146 0.854 36 H 0.145 0.855 37 H 0.149 0.851 38 H 0.103 0.897 39 H 0.078 0.922 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.469 0.857 0.807 1.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.094 4.094 5 C -0.223 4.223 6 C -0.122 4.122 7 C -0.166 4.166 8 C 0.382 3.618 9 O -0.396 6.396 10 N -0.367 5.367 11 C 0.017 3.983 12 H 0.130 0.870 13 C -0.181 4.181 14 C -0.094 4.094 15 H 0.120 0.880 16 C -0.116 4.116 17 C -0.078 4.078 18 C -0.177 4.177 19 C 0.108 3.892 20 F -0.108 7.108 21 C -0.209 4.209 22 C 0.113 3.887 23 F -0.108 7.108 24 C -0.173 4.173 25 N -0.120 5.120 26 H 0.229 0.771 27 H 0.138 0.862 28 H -0.179 1.179 29 H -0.180 1.180 30 H 0.169 0.831 31 H 0.171 0.829 32 H 0.229 0.771 33 H 0.097 0.903 34 H 0.118 0.882 35 H 0.164 0.836 36 H 0.163 0.837 37 H 0.167 0.833 38 H 0.121 0.879 39 H 0.097 0.903 40 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 0.662 1.125 0.681 1.473 hybrid contribution -1.735 -0.831 0.576 2.008 sum -1.072 0.294 1.257 1.678 Atomic orbital electron populations 1.86597 1.17585 1.80203 1.49708 1.24926 0.84017 1.11880 0.96296 0.94245 0.91406 0.72097 0.80593 1.21108 1.03581 0.85156 0.99514 1.20721 1.05094 1.00727 0.95780 1.21344 1.00307 0.90471 1.00125 1.20429 1.08190 0.96628 0.91327 1.17038 0.78618 0.81799 0.84349 1.90877 1.43791 1.82911 1.21995 1.45560 1.53555 1.11254 1.26326 1.21842 0.96534 0.81792 0.98175 0.87031 1.23591 0.96557 0.98650 0.99254 1.21556 0.98011 0.90650 0.99163 0.88020 1.19784 1.02221 0.96620 0.93009 1.20778 0.96844 0.91516 0.98629 1.21265 1.02590 0.96722 0.97168 1.17340 0.99701 0.77657 0.94455 1.91561 1.92867 1.30457 1.95917 1.21086 1.06621 0.91918 1.01306 1.17144 0.99364 0.86658 0.85496 1.91527 1.90372 1.69766 1.59104 1.23460 0.96942 0.98869 0.98007 1.41945 1.39932 1.11239 1.18930 0.77149 0.86184 1.17878 1.18035 0.83074 0.82880 0.77095 0.90313 0.88227 0.83631 0.83693 0.83286 0.87898 0.90290 0.74626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.38 12.88 -35.23 -0.45 -0.07 16 2 C -0.06 0.12 3.08 36.01 0.11 0.24 16 3 Si 0.72 -1.74 30.54 -169.99 -5.19 -6.94 16 4 C 0.02 -0.03 6.47 -81.95 -0.53 -0.56 16 5 C -0.20 0.10 9.32 -39.98 -0.37 -0.28 16 6 C -0.10 -0.11 10.65 -39.12 -0.42 -0.53 16 7 C -0.05 -0.05 7.06 -81.98 -0.58 -0.62 16 8 C 0.59 1.08 7.79 -12.86 -0.10 0.98 16 9 O -0.52 -2.87 16.48 5.20 0.09 -2.79 16 10 N -0.72 0.94 5.26 -54.33 -0.29 0.65 16 11 C 0.12 -0.20 4.32 -67.12 -0.29 -0.49 16 12 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 13 C -0.14 0.32 7.25 -25.92 -0.19 0.13 16 14 C -0.08 0.18 3.78 -90.96 -0.34 -0.16 16 15 H 0.10 -0.23 7.45 -51.93 -0.39 -0.62 16 16 C -0.12 0.14 5.30 -104.54 -0.55 -0.41 16 17 C -0.06 0.13 8.61 -39.60 -0.34 -0.21 16 18 C -0.16 0.21 10.02 -39.51 -0.40 -0.19 16 19 C 0.13 0.05 7.30 -39.43 -0.29 -0.24 16 20 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 21 C -0.19 -0.04 10.01 -39.45 -0.39 -0.44 16 22 C 0.13 0.03 7.24 -39.43 -0.29 -0.25 16 23 F -0.13 -0.14 16.36 2.25 0.04 -0.10 16 24 C -0.13 0.41 7.29 -25.92 -0.19 0.22 16 25 N -0.52 0.69 5.99 -5.69 -0.03 0.66 16 26 H 0.38 -1.19 8.70 45.56 0.40 -0.79 16 27 H 0.12 -0.35 7.96 -51.93 -0.41 -0.77 16 28 H -0.25 0.06 7.11 56.52 0.40 0.46 16 29 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 30 H 0.15 -0.36 6.17 -52.49 -0.32 -0.69 16 31 H 0.15 0.14 8.06 -52.49 -0.42 -0.29 16 32 H 0.40 -1.42 7.83 -40.82 -0.32 -1.74 16 33 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.10 -0.32 6.31 -51.93 -0.33 -0.65 16 35 H 0.15 -0.64 6.65 -52.49 -0.35 -0.99 16 36 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 37 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 38 H 0.10 -0.38 7.72 -51.93 -0.40 -0.78 16 39 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 40 H 0.42 -1.45 8.19 -40.82 -0.33 -1.79 16 LS Contribution 349.40 15.07 5.27 5.27 Total: 0.00 -7.90 349.40 -9.85 -17.75 By element: Atomic # 1 Polarization: -7.27 SS G_CDS: -4.16 Total: -11.43 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -5.16 Total: -2.82 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: -0.32 Total: 1.31 kcal Atomic # 8 Polarization: -2.49 SS G_CDS: -0.37 Total: -2.86 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.08 Total: -0.29 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.19 Total: -6.94 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -7.90 -9.85 -17.75 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.533 kcal (2) G-P(sol) polarization free energy of solvation -7.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.430 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.751 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds