Wall clock time and date at job start Sun Mar 7 2021 00:10:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35965 * 116.99638 * 2 1 4 4 C 1.39449 * 120.11515 * 179.72366 * 3 2 1 5 5 O 1.34774 * 133.24580 * 359.97438 * 4 3 2 6 6 C 1.34932 * 110.84082 * 180.02562 * 5 4 3 7 7 C 1.46990 * 125.13634 * 179.97438 * 6 5 4 8 8 O 1.21653 * 119.99933 * 180.02562 * 7 6 5 9 9 N 1.34781 * 120.00270 * 0.02562 * 7 6 5 10 10 C 1.46500 * 120.00009 * 179.97438 * 9 7 6 11 11 H 1.09008 * 112.84841 * 336.19430 * 10 9 7 12 12 C 1.53778 * 113.61412 * 107.50421 * 10 9 7 13 13 C 1.53774 * 87.08143 * 89.11713 * 12 10 9 14 14 H 1.09005 * 113.61334 * 270.88533 * 13 12 10 15 15 C 1.50699 * 113.69327 * 139.99428 * 13 12 10 16 16 C 1.38454 * 119.99004 * 142.18313 * 15 13 12 17 17 F 1.35107 * 120.01143 * 0.02824 * 16 15 13 18 18 C 1.38436 * 119.97423 * 179.76729 * 16 15 13 19 19 C 1.38400 * 119.95229 * 0.48719 * 18 16 15 20 20 F 1.35100 * 120.01517 * 179.78626 * 19 18 16 21 21 C 1.38501 * 119.97077 * 359.77111 * 19 18 16 22 22 C 1.38189 * 120.02661 * 359.97438 * 21 19 18 23 23 C 1.53775 * 113.61471 * 205.00058 * 10 9 7 24 24 C 1.35813 * 109.71902 * 359.44997 * 6 5 4 25 25 C 1.40613 * 119.13083 * 179.75744 * 4 3 2 26 26 C 1.39773 * 120.12426 * 0.50277 * 25 4 3 27 27 C 1.50692 * 120.09967 * 179.75174 * 26 25 4 28 28 O 1.42902 * 109.47748 * 75.01649 * 27 26 25 29 29 Si 1.86302 * 109.47334 * 195.01969 * 27 26 25 30 30 C 1.36635 * 119.80656 * 359.76274 * 26 25 4 31 31 C 1.38252 * 120.12195 * 0.02562 * 3 2 1 32 32 H 1.08996 * 109.47352 * 299.99786 * 1 2 3 33 33 H 1.08996 * 109.47452 * 60.00239 * 1 2 3 34 34 H 1.09005 * 109.47329 * 179.97438 * 1 2 3 35 35 H 0.96999 * 119.99549 * 0.02562 * 9 7 6 36 36 H 1.09005 * 113.61352 * 203.66884 * 12 10 9 37 37 H 1.08997 * 113.61447 * 334.56305 * 12 10 9 38 38 H 1.08002 * 120.02782 * 180.25662 * 18 16 15 39 39 H 1.08002 * 119.98499 * 180.02562 * 21 19 18 40 40 H 1.07994 * 119.97217 * 180.02562 * 22 21 19 41 41 H 1.09002 * 113.61526 * 25.43337 * 23 10 9 42 42 H 1.08996 * 113.61730 * 156.33456 * 23 10 9 43 43 H 1.08003 * 126.95432 * 179.97438 * 24 6 5 44 44 H 1.09004 * 109.46633 * 315.01780 * 27 26 25 45 45 H 0.96697 * 114.00397 * 180.02562 * 28 27 26 46 46 H 1.48498 * 109.99977 * 178.67545 * 29 27 26 47 47 H 1.48505 * 109.99790 * 299.99438 * 29 27 26 48 48 H 1.08003 * 119.74596 * 180.02562 * 30 26 25 49 49 H 1.08005 * 119.66437 * 359.96949 * 31 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2874 0.0058 5 8 4.4140 0.3573 0.0125 6 6 5.6316 0.9388 0.0168 7 6 6.9130 0.2185 0.0249 8 8 7.9594 0.8389 0.0287 9 7 6.9286 -1.1292 0.0281 10 6 8.2057 -1.8470 0.0357 11 1 9.0268 -1.2541 -0.3674 12 6 8.5288 -2.5151 1.3825 13 6 7.7766 -3.7506 0.8607 14 1 6.7091 -3.7370 1.0806 15 6 8.4326 -5.0575 1.2251 16 6 7.6545 -6.1520 1.5623 17 9 6.3074 -6.0487 1.5641 18 6 8.2573 -7.3538 1.8923 19 6 9.6374 -7.4569 1.8946 20 9 10.2271 -8.6279 2.2207 21 6 10.4138 -6.3592 1.5622 22 6 9.8109 -5.1615 1.2278 23 6 8.1197 -3.2633 -0.5569 24 6 5.4944 2.2898 0.0007 25 6 4.0553 2.5510 0.0005 26 6 3.2765 3.7117 0.0001 27 6 3.9380 5.0657 0.0001 28 8 4.4604 5.3407 -1.3013 29 14 2.6862 6.3684 0.4548 30 6 1.9136 3.6150 0.0001 31 6 1.2956 2.3725 0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3634 0.5138 -0.8900 34 1 -0.3634 -1.0277 -0.0005 35 1 6.0942 -1.6238 0.0247 36 1 9.5937 -2.6865 1.5405 37 1 8.0452 -2.0369 2.2343 38 1 7.6511 -8.2092 2.1514 39 1 11.4909 -6.4395 1.5635 40 1 10.4172 -4.3063 0.9683 41 1 7.3058 -3.3893 -1.2709 42 1 9.0726 -3.6395 -0.9292 43 1 6.2874 3.0231 0.0000 44 1 4.7504 5.0731 0.7268 45 1 4.9017 6.1980 -1.3749 46 1 3.3335 7.7045 0.4894 47 1 1.5733 6.3685 -0.5285 48 1 1.3127 4.5125 -0.0006 49 1 0.2173 2.3119 0.0005 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:09 Heat of formation + Delta-G solvation = -93.328662 kcal Electronic energy + Delta-G solvation = -38497.901387 eV Core-core repulsion = 32996.032743 eV Total energy + Delta-G solvation = -5501.868643 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.131 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -50.03215 -49.99092 -43.64105 -41.63569 -40.70805 -40.09648 -38.99400 -38.74481 -37.18420 -34.72902 -33.55592 -32.08711 -31.91729 -31.61491 -30.83266 -28.70820 -26.91264 -26.67939 -26.18478 -25.01964 -24.19042 -23.92996 -22.90882 -22.01076 -21.59970 -20.39070 -19.83379 -19.30232 -18.85591 -18.57192 -18.42555 -18.21740 -17.62727 -17.47649 -17.07413 -17.01794 -16.90461 -16.65325 -16.59484 -16.32421 -16.31067 -15.92064 -15.74370 -15.64093 -15.49445 -15.29388 -15.04498 -14.64583 -14.48855 -14.15464 -14.09439 -14.01281 -13.93218 -13.84373 -13.65202 -13.55331 -13.40229 -13.21804 -12.91030 -12.65992 -12.64209 -12.43557 -12.19782 -12.07859 -11.86582 -11.72815 -11.48133 -11.41486 -10.92067 -10.51045 -10.29415 -10.15133 -9.74104 -9.63818 -8.95670 -5.01954 -0.56920 -0.17030 -0.09405 0.16153 0.72498 1.19767 1.30210 1.53137 1.87689 1.90157 2.03683 2.07333 2.21431 2.40321 2.79419 3.17742 3.19017 3.34255 3.36462 3.40459 3.49157 3.55071 3.57897 3.67551 3.71948 3.80552 3.86342 3.94787 3.97551 3.99836 4.07223 4.12238 4.12410 4.17007 4.33061 4.45876 4.48422 4.48784 4.52777 4.61646 4.66872 4.72543 4.77241 4.84055 4.85650 4.86388 4.91687 4.93712 4.97520 5.09077 5.14001 5.28213 5.33018 5.40747 5.65252 5.66541 6.17172 6.31915 6.41725 6.90881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.173 6.173 6 C -0.025 4.025 7 C 0.607 3.393 8 O -0.508 6.508 9 N -0.701 5.701 10 C 0.119 3.881 11 H 0.113 0.887 12 C -0.142 4.142 13 C -0.077 4.077 14 H 0.105 0.895 15 C -0.115 4.115 16 C 0.134 3.866 17 F -0.128 7.128 18 C -0.190 4.190 19 C 0.127 3.873 20 F -0.130 7.130 21 C -0.159 4.159 22 C -0.060 4.060 23 C -0.134 4.134 24 C -0.102 4.102 25 C -0.083 4.083 26 C -0.050 4.050 27 C -0.075 4.075 28 O -0.533 6.533 29 Si 0.688 3.312 30 C -0.090 4.090 31 C -0.176 4.176 32 H 0.061 0.939 33 H 0.060 0.940 34 H 0.105 0.895 35 H 0.410 0.590 36 H 0.100 0.900 37 H 0.079 0.921 38 H 0.149 0.851 39 H 0.145 0.855 40 H 0.146 0.854 41 H 0.081 0.919 42 H 0.103 0.897 43 H 0.173 0.827 44 H 0.077 0.923 45 H 0.380 0.620 46 H -0.259 1.259 47 H -0.253 1.253 48 H 0.140 0.860 49 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.847 1.214 1.847 3.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.104 3.896 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.076 4.076 7 C 0.393 3.607 8 O -0.384 6.384 9 N -0.352 5.352 10 C 0.014 3.986 11 H 0.131 0.869 12 C -0.180 4.180 13 C -0.095 4.095 14 H 0.123 0.877 15 C -0.116 4.116 16 C 0.114 3.886 17 F -0.107 7.107 18 C -0.210 4.210 19 C 0.108 3.892 20 F -0.109 7.109 21 C -0.178 4.178 22 C -0.078 4.078 23 C -0.172 4.172 24 C -0.122 4.122 25 C -0.084 4.084 26 C -0.051 4.051 27 C -0.184 4.184 28 O -0.340 6.340 29 Si 0.589 3.411 30 C -0.108 4.108 31 C -0.195 4.195 32 H 0.080 0.920 33 H 0.079 0.921 34 H 0.124 0.876 35 H 0.245 0.755 36 H 0.118 0.882 37 H 0.098 0.902 38 H 0.167 0.833 39 H 0.163 0.837 40 H 0.164 0.836 41 H 0.100 0.900 42 H 0.122 0.878 43 H 0.190 0.810 44 H 0.095 0.905 45 H 0.228 0.772 46 H -0.184 1.184 47 H -0.178 1.178 48 H 0.158 0.842 49 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.746 1.249 1.491 3.365 hybrid contribution -0.017 -0.094 -0.684 0.690 sum -2.763 1.156 0.808 3.102 Atomic orbital electron populations 1.23192 0.77322 1.04753 1.01815 1.86173 1.22155 1.25638 1.88382 1.17728 0.86483 0.85886 0.99467 1.18729 0.87432 0.86839 1.07104 1.84048 1.12617 1.34683 1.76164 1.21898 0.83895 0.92552 1.09224 1.16583 0.85457 0.82004 0.76686 1.90917 1.30331 1.67410 1.49744 1.45572 1.09799 1.05619 1.74172 1.21920 0.86650 0.92765 0.97298 0.86917 1.23590 1.01608 0.94876 0.97938 1.21577 1.00406 0.90321 0.97181 0.87714 1.19788 0.93868 0.94866 1.03041 1.17147 0.77280 0.93632 1.00502 1.91537 1.28752 1.96515 1.93846 1.21081 0.94210 0.98918 1.06743 1.17342 0.90204 0.82201 0.99466 1.91560 1.84020 1.45436 1.89840 1.21257 1.01339 0.92137 1.03068 1.20773 0.93056 0.97405 0.96551 1.23451 1.03873 0.94006 0.95872 1.22701 0.94709 0.94286 1.00536 1.19397 0.92635 0.92112 1.04257 1.18337 0.92361 0.92006 1.02374 1.24778 1.04886 1.00571 0.88170 1.86620 1.76776 1.41131 1.29505 0.94978 0.79634 0.76966 0.89543 1.20532 0.93363 0.97807 0.99099 1.20957 1.00398 0.90436 1.07748 0.92001 0.92146 0.87644 0.75456 0.88166 0.90192 0.83310 0.83746 0.83648 0.90013 0.87833 0.80967 0.90497 0.77184 1.18382 1.17754 0.84243 0.83387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.53 10.50 -19.63 -0.21 -0.74 16 3 C 0.15 0.32 6.70 -39.13 -0.26 0.06 16 4 C 0.05 0.17 7.35 -38.24 -0.28 -0.11 16 5 O -0.17 -0.59 10.28 2.65 0.03 -0.56 16 6 C -0.03 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.61 1.65 7.80 -12.71 -0.10 1.55 16 8 O -0.51 -2.69 16.43 5.23 0.09 -2.60 16 9 N -0.70 -0.01 5.26 -54.23 -0.29 -0.30 16 10 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 11 H 0.11 -0.04 7.46 -51.92 -0.39 -0.43 16 12 C -0.14 0.27 7.25 -25.92 -0.19 0.08 16 13 C -0.08 0.13 3.78 -90.97 -0.34 -0.21 16 14 H 0.10 -0.13 7.44 -51.93 -0.39 -0.52 16 15 C -0.11 0.09 5.30 -104.55 -0.55 -0.46 16 16 C 0.13 0.09 7.24 -39.43 -0.29 -0.20 16 17 F -0.13 -0.22 16.36 2.25 0.04 -0.18 16 18 C -0.19 -0.10 10.01 -39.45 -0.39 -0.50 16 19 C 0.13 0.08 7.30 -39.42 -0.29 -0.21 16 20 F -0.13 -0.25 17.27 2.25 0.04 -0.22 16 21 C -0.16 0.17 10.03 -39.50 -0.40 -0.22 16 22 C -0.06 0.12 8.61 -39.60 -0.34 -0.22 16 23 C -0.13 0.34 7.29 -25.93 -0.19 0.15 16 24 C -0.10 -0.30 10.68 -37.23 -0.40 -0.70 16 25 C -0.08 -0.26 6.16 -105.21 -0.65 -0.91 16 26 C -0.05 -0.09 5.30 -104.63 -0.55 -0.64 16 27 C -0.07 -0.01 2.70 36.00 0.10 0.09 16 28 O -0.53 -0.74 12.86 -35.23 -0.45 -1.19 16 29 Si 0.69 -0.95 30.20 -169.99 -5.13 -6.09 16 30 C -0.09 -0.03 8.62 -39.96 -0.34 -0.38 16 31 C -0.18 -0.01 9.03 -39.38 -0.36 -0.36 16 32 H 0.06 -0.23 7.66 -51.93 -0.40 -0.63 16 33 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 34 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 35 H 0.41 -0.49 8.42 -40.82 -0.34 -0.84 16 36 H 0.10 -0.32 6.32 -51.93 -0.33 -0.64 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.15 -0.07 8.06 -52.49 -0.42 -0.49 16 39 H 0.14 -0.40 8.06 -52.49 -0.42 -0.82 16 40 H 0.15 -0.62 6.66 -52.49 -0.35 -0.97 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.10 -0.36 7.72 -51.93 -0.40 -0.76 16 43 H 0.17 0.31 8.06 -52.48 -0.42 -0.11 16 44 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 45 H 0.38 -1.01 8.74 45.56 0.40 -0.61 16 46 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 47 H -0.25 -0.27 6.75 56.52 0.38 0.12 16 48 H 0.14 -0.21 4.85 -52.48 -0.25 -0.46 16 49 H 0.15 -0.42 6.26 -52.48 -0.33 -0.75 16 LS Contribution 421.10 15.07 6.35 6.35 Total: 0.00 -9.02 421.10 -10.27 -19.29 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -5.34 Total: -10.74 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -5.38 Total: -3.02 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: -0.29 Total: -0.30 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -0.55 Total: -5.09 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.08 Total: -0.40 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.13 Total: -6.09 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -9.02 -10.27 -19.29 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.034 kcal (2) G-P(sol) polarization free energy of solvation -9.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.294 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds