Wall clock time and date at job start Sun Mar 7 2021 00:10:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.33823 * 122.45118 * 2 1 4 4 C 1.50698 * 124.51955 * 359.95403 * 3 2 1 5 5 O 1.42897 * 109.47501 * 113.27613 * 4 3 2 6 6 Si 1.86295 * 109.46908 * 233.27835 * 4 3 2 7 7 S 1.70617 * 110.95740 * 179.97438 * 3 2 1 8 8 C 1.75836 * 91.56104 * 0.02562 * 7 3 2 9 9 C 1.46580 * 125.45441 * 180.02562 * 8 7 3 10 10 O 1.21700 * 119.99982 * 180.02562 * 9 8 7 11 11 N 1.34783 * 120.00310 * 0.02562 * 9 8 7 12 12 C 1.46500 * 120.00208 * 180.02562 * 11 9 8 13 13 H 1.09004 * 112.84827 * 23.80736 * 12 11 9 14 14 C 1.53779 * 113.61152 * 155.00322 * 12 11 9 15 15 C 1.53779 * 87.08104 * 89.20217 * 14 12 11 16 16 H 1.08994 * 113.61384 * 270.79795 * 15 14 12 17 17 C 1.50695 * 113.61554 * 139.97583 * 15 14 12 18 18 C 1.38458 * 119.98666 * 120.27454 * 17 15 14 19 19 F 1.35104 * 120.01319 * 0.02814 * 18 17 15 20 20 C 1.38441 * 119.97285 * 180.30198 * 18 17 15 21 21 C 1.38392 * 119.95202 * 359.42647 * 20 18 17 22 22 F 1.35105 * 120.01601 * 180.25565 * 21 20 18 23 23 C 1.38493 * 119.97385 * 0.27664 * 21 20 18 24 24 C 1.38189 * 120.02598 * 0.02562 * 23 21 20 25 25 C 1.53775 * 113.69172 * 252.54179 * 12 11 9 26 26 C 1.36646 * 109.08705 * 0.26133 * 8 7 3 27 27 H 1.09003 * 109.46966 * 84.85339 * 1 2 3 28 28 H 1.09006 * 109.47183 * 204.84720 * 1 2 3 29 29 H 1.08992 * 109.47329 * 324.85008 * 1 2 3 30 30 H 1.09000 * 109.47079 * 353.27341 * 4 3 2 31 31 H 0.96699 * 113.99583 * 59.99692 * 5 4 3 32 32 H 1.48500 * 110.00403 * 58.68123 * 6 4 3 33 33 H 1.48507 * 110.00055 * 179.97438 * 6 4 3 34 34 H 0.97004 * 119.99462 * 0.02562 * 11 9 8 35 35 H 1.08999 * 113.61503 * 334.64750 * 14 12 11 36 36 H 1.09002 * 113.68581 * 203.76466 * 14 12 11 37 37 H 1.08005 * 120.02591 * 179.70327 * 20 18 17 38 38 H 1.08005 * 119.98714 * 180.02562 * 23 21 20 39 39 H 1.08004 * 119.97631 * 179.97438 * 24 23 21 40 40 H 1.08998 * 113.61583 * 156.32539 * 25 12 11 41 41 H 1.09001 * 113.61948 * 25.41618 * 25 12 11 42 42 H 1.08000 * 123.35207 * 179.73472 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1293 0.0000 4 6 1.6355 2.5161 -0.0010 5 8 1.9383 3.1634 1.2365 6 14 2.3601 3.4978 -1.4088 7 16 3.8970 0.7893 0.0007 8 6 3.5937 -0.9427 0.0002 9 6 4.6232 -1.9862 0.0010 10 8 4.3002 -3.1595 0.0001 11 7 5.9274 -1.6462 0.0028 12 6 6.9563 -2.6891 0.0030 13 1 6.5997 -3.6355 -0.4037 14 6 8.2986 -2.2302 -0.5905 15 6 8.6824 -1.7796 0.8288 16 1 8.3906 -0.7542 1.0553 17 6 10.1162 -2.0730 1.1883 18 6 10.9699 -1.0376 1.5293 19 9 10.5176 0.2354 1.5404 20 6 12.2886 -1.3068 1.8535 21 6 12.7490 -2.6119 1.8478 22 9 14.0343 -2.8766 2.1689 23 6 11.8916 -3.6466 1.5123 24 6 10.5771 -3.3761 1.1828 25 6 7.6895 -2.8334 1.3470 26 6 2.2447 -1.1601 -0.0063 27 1 -0.3633 0.0922 -1.0236 28 1 -0.3634 -0.9326 0.4318 29 1 -0.3633 0.8402 0.5916 30 1 0.5542 2.4512 -0.1221 31 1 2.8849 3.2558 1.4106 32 1 2.0795 2.8185 -2.6991 33 1 1.7863 4.8675 -1.4212 34 1 6.1848 -0.7109 0.0039 35 1 8.2042 -1.4075 -1.2993 36 1 8.9119 -3.0475 -0.9700 37 1 12.9565 -0.4993 2.1150 38 1 12.2506 -4.6652 1.5082 39 1 9.9094 -4.1836 0.9210 40 1 8.1353 -3.8166 1.4978 41 1 7.1034 -2.4976 2.2025 42 1 1.8020 -2.1452 -0.0121 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:14 Heat of formation + Delta-G solvation = -73.915892 kcal Electronic energy + Delta-G solvation = -29185.376955 eV Core-core repulsion = 24667.319024 eV Total energy + Delta-G solvation = -4518.057931 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.089 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.06201 -50.00700 -41.68361 -40.48926 -39.72477 -38.71394 -37.61017 -34.69308 -32.59294 -31.95268 -31.45917 -29.94345 -27.31365 -26.93120 -25.96149 -24.60088 -24.15082 -22.94331 -22.00709 -20.56016 -20.08999 -19.61892 -19.27691 -18.27604 -17.91876 -17.52283 -17.37495 -17.04228 -16.90865 -16.61881 -16.34003 -16.27393 -16.12297 -15.80510 -15.52973 -15.40635 -15.32853 -15.03661 -14.79744 -14.40983 -14.22562 -14.11051 -13.91779 -13.67531 -13.59660 -13.52882 -13.22692 -13.09818 -12.90700 -12.66146 -12.48676 -12.25882 -12.19250 -12.01766 -11.87428 -11.47650 -11.16191 -10.84193 -10.27771 -10.16760 -9.74972 -9.65956 -9.52896 -5.27514 -0.69659 -0.19110 -0.11476 0.24239 0.64416 1.00355 1.22622 1.52187 1.81606 1.89131 2.10006 2.19503 2.77179 3.16304 3.21509 3.34123 3.37489 3.44925 3.47063 3.52990 3.63240 3.71746 3.78927 3.91879 4.02145 4.05377 4.09458 4.33630 4.38665 4.44436 4.51239 4.58243 4.59806 4.64548 4.69829 4.75300 4.76518 4.82059 4.84692 4.89511 4.93571 4.95774 5.13258 5.19220 5.30434 5.41349 5.64453 6.27610 6.29766 7.03012 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.098 4.098 3 C -0.230 4.230 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.677 3.323 7 S 0.202 5.798 8 C -0.261 4.261 9 C 0.597 3.403 10 O -0.522 6.522 11 N -0.710 5.710 12 C 0.121 3.879 13 H 0.111 0.889 14 C -0.135 4.135 15 C -0.076 4.076 16 H 0.104 0.896 17 C -0.115 4.115 18 C 0.134 3.866 19 F -0.128 7.128 20 C -0.190 4.190 21 C 0.127 3.873 22 F -0.130 7.130 23 C -0.159 4.159 24 C -0.060 4.060 25 C -0.143 4.143 26 C -0.043 4.043 27 H 0.073 0.927 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.128 0.872 31 H 0.378 0.622 32 H -0.248 1.248 33 H -0.240 1.240 34 H 0.399 0.601 35 H 0.081 0.919 36 H 0.103 0.897 37 H 0.149 0.851 38 H 0.145 0.855 39 H 0.146 0.854 40 H 0.099 0.901 41 H 0.079 0.921 42 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.766 1.403 -1.204 2.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.111 4.111 3 C -0.350 4.350 4 C -0.147 4.147 5 O -0.337 6.337 6 Si 0.575 3.425 7 S 0.471 5.529 8 C -0.381 4.381 9 C 0.383 3.617 10 O -0.399 6.399 11 N -0.362 5.362 12 C 0.016 3.984 13 H 0.129 0.871 14 C -0.173 4.173 15 C -0.094 4.094 16 H 0.122 0.878 17 C -0.116 4.116 18 C 0.114 3.886 19 F -0.107 7.107 20 C -0.209 4.209 21 C 0.108 3.892 22 F -0.108 7.108 23 C -0.178 4.178 24 C -0.078 4.078 25 C -0.181 4.181 26 C -0.077 4.077 27 H 0.092 0.908 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.145 0.855 31 H 0.225 0.775 32 H -0.171 1.171 33 H -0.163 1.163 34 H 0.234 0.766 35 H 0.099 0.901 36 H 0.121 0.879 37 H 0.167 0.833 38 H 0.162 0.838 39 H 0.163 0.837 40 H 0.117 0.883 41 H 0.097 0.903 42 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 2.092 1.970 -1.906 3.448 hybrid contribution -1.305 -0.528 0.387 1.460 sum 0.787 1.443 -1.519 2.238 Atomic orbital electron populations 1.20624 0.89128 1.03635 1.02703 1.18704 0.98159 0.90914 1.03282 1.24463 0.98848 1.00802 1.10865 1.24653 1.03828 0.89813 0.96363 1.86577 1.29742 1.79397 1.38011 0.95131 0.90122 0.80288 0.76925 1.82639 1.02891 0.98634 1.68716 1.24460 0.97928 0.96682 1.19016 1.16895 0.81468 0.87411 0.75891 1.90865 1.81499 1.18127 1.49365 1.45515 1.05012 1.09789 1.75846 1.21853 0.86943 0.92488 0.97101 0.87072 1.23456 0.95521 1.02503 0.95774 1.21570 0.89830 1.00788 0.97229 0.87768 1.19787 0.96092 0.92643 1.03064 1.17136 0.91754 0.79119 1.00565 1.91530 1.89177 1.36098 1.93859 1.21082 0.95909 0.97202 1.06746 1.17343 0.79418 0.92969 0.99471 1.91563 1.34766 1.94566 1.89953 1.21260 0.93874 0.99624 1.03032 1.20777 0.94709 0.95758 0.96553 1.23597 0.96863 0.99558 0.98104 1.20707 0.90921 1.00066 0.95962 0.90825 0.90725 0.90916 0.85485 0.77501 1.17146 1.16346 0.76566 0.90077 0.87905 0.83290 0.83756 0.83671 0.88261 0.90263 0.82563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.10 9.47 36.00 0.34 0.44 16 2 C -0.10 -0.04 5.78 -106.45 -0.62 -0.66 16 3 C -0.23 0.11 4.83 -35.86 -0.17 -0.06 16 4 C -0.03 0.03 2.77 36.00 0.10 0.13 16 5 O -0.53 0.29 12.88 -35.23 -0.45 -0.17 16 6 Si 0.68 -1.12 32.13 -169.99 -5.46 -6.58 16 7 S 0.20 -0.42 20.83 -107.50 -2.24 -2.65 16 8 C -0.26 -0.21 6.45 -36.79 -0.24 -0.44 16 9 C 0.60 1.12 7.78 -12.89 -0.10 1.02 16 10 O -0.52 -2.86 16.44 5.19 0.09 -2.77 16 11 N -0.71 0.79 5.26 -54.36 -0.29 0.50 16 12 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 13 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 14 C -0.13 0.44 7.29 -25.92 -0.19 0.25 16 15 C -0.08 0.20 3.78 -90.96 -0.34 -0.15 16 16 H 0.10 -0.27 7.44 -51.93 -0.39 -0.66 16 17 C -0.11 0.17 5.29 -104.55 -0.55 -0.38 16 18 C 0.13 -0.01 7.25 -39.43 -0.29 -0.30 16 19 F -0.13 -0.08 16.36 2.25 0.04 -0.04 16 20 C -0.19 0.01 10.01 -39.45 -0.39 -0.39 16 21 C 0.13 0.02 7.30 -39.43 -0.29 -0.26 16 22 F -0.13 -0.21 17.27 2.25 0.04 -0.17 16 23 C -0.16 0.23 10.02 -39.51 -0.40 -0.16 16 24 C -0.06 0.14 8.61 -39.60 -0.34 -0.20 16 25 C -0.14 0.34 7.25 -25.92 -0.19 0.15 16 26 C -0.04 -0.05 9.78 -40.43 -0.40 -0.45 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.11 8.11 -51.93 -0.42 -0.53 16 29 H 0.07 -0.08 7.00 -51.93 -0.36 -0.44 16 30 H 0.13 -0.12 6.25 -51.93 -0.32 -0.44 16 31 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 32 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 33 H -0.24 -0.25 7.11 56.52 0.40 0.15 16 34 H 0.40 -1.28 7.82 -40.82 -0.32 -1.60 16 35 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 36 H 0.10 -0.41 7.72 -51.93 -0.40 -0.81 16 37 H 0.15 -0.16 8.06 -52.48 -0.42 -0.58 16 38 H 0.14 -0.44 8.06 -52.48 -0.42 -0.86 16 39 H 0.15 -0.66 6.66 -52.48 -0.35 -1.01 16 40 H 0.10 -0.33 6.31 -51.93 -0.33 -0.66 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 42 H 0.16 0.15 8.06 -52.49 -0.42 -0.27 16 LS Contribution 375.43 15.07 5.66 5.66 Total: 0.00 -7.59 375.43 -11.59 -19.18 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -4.62 Total: -11.00 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -4.35 Total: -1.95 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.29 Total: 0.50 kcal Atomic # 8 Polarization: -2.57 SS G_CDS: -0.37 Total: -2.94 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.08 Total: -0.21 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.46 Total: -6.58 kcal Atomic # 16 Polarization: -0.42 SS G_CDS: -2.24 Total: -2.65 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -7.59 -11.59 -19.18 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.740 kcal (2) G-P(sol) polarization free energy of solvation -7.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.176 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds