Wall clock time and date at job start Sun Mar 7 2021 00:10:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37932 * 120.07776 * 2 1 4 4 C 1.38379 * 120.15111 * 180.02562 * 3 2 1 5 5 C 1.50697 * 119.85608 * 180.02562 * 4 3 2 6 6 C 1.38334 * 120.28778 * 359.97438 * 4 3 2 7 7 C 1.50706 * 119.92517 * 179.97438 * 6 4 3 8 8 O 1.42903 * 109.46915 * 75.00425 * 7 6 4 9 9 Si 1.86303 * 109.47221 * 194.99842 * 7 6 4 10 10 C 1.37977 * 120.15222 * 0.02562 * 6 4 3 11 11 C 1.39563 * 119.84631 * 359.67967 * 10 6 4 12 12 C 1.47845 * 120.14649 * 180.29615 * 11 10 6 13 13 O 1.21549 * 120.00300 * 186.30814 * 12 11 10 14 14 N 1.34773 * 119.99676 * 6.30231 * 12 11 10 15 15 C 1.46508 * 120.00144 * 179.97438 * 14 12 11 16 16 H 1.09006 * 112.84415 * 334.67355 * 15 14 12 17 17 C 1.53777 * 113.61185 * 105.86490 * 15 14 12 18 18 C 1.54052 * 86.98646 * 89.16667 * 17 15 14 19 19 H 1.09001 * 113.61099 * 270.88198 * 18 17 15 20 20 C 1.50701 * 113.69790 * 139.98818 * 18 17 15 21 21 C 1.38448 * 119.98429 * 142.46790 * 20 18 17 22 22 F 1.35099 * 120.01765 * 359.95359 * 21 20 18 23 23 C 1.38445 * 119.97279 * 179.97438 * 21 20 18 24 24 C 1.38402 * 119.94674 * 359.97438 * 23 21 20 25 25 F 1.35100 * 120.01131 * 179.97438 * 24 23 21 26 26 C 1.38496 * 119.97559 * 0.02562 * 24 23 21 27 27 C 1.38181 * 120.02544 * 359.74435 * 26 24 23 28 28 C 1.53780 * 113.61498 * 203.47471 * 15 14 12 29 29 H 1.08998 * 109.46669 * 96.55103 * 1 2 3 30 30 H 1.09000 * 109.47002 * 336.55316 * 1 2 3 31 31 H 1.08996 * 109.47380 * 216.55149 * 1 2 3 32 32 H 1.08003 * 119.92564 * 0.02562 * 3 2 1 33 33 H 1.08998 * 109.47385 * 90.00221 * 5 4 3 34 34 H 1.09003 * 109.47056 * 209.99856 * 5 4 3 35 35 H 1.08998 * 109.47369 * 329.99480 * 5 4 3 36 36 H 1.08997 * 109.47091 * 315.00171 * 7 6 4 37 37 H 0.96699 * 114.00700 * 59.99617 * 8 7 6 38 38 H 1.48492 * 110.00057 * 179.97438 * 9 7 6 39 39 H 1.48497 * 109.99952 * 301.32390 * 9 7 6 40 40 H 1.07998 * 120.08174 * 179.97438 * 10 6 4 41 41 H 0.97001 * 120.00459 * 0.02562 * 14 12 11 42 42 H 1.09007 * 113.61362 * 203.66532 * 17 15 14 43 43 H 1.09000 * 113.61879 * 334.56972 * 17 15 14 44 44 H 1.07998 * 120.03057 * 180.02562 * 23 21 20 45 45 H 1.07998 * 119.98697 * 179.97438 * 26 24 23 46 46 H 1.07997 * 119.97802 * 180.25543 * 27 26 24 47 47 H 1.08996 * 113.61461 * 25.43281 * 28 15 14 48 48 H 1.09003 * 113.60981 * 156.33175 * 28 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1936 0.0000 4 6 3.5821 1.1954 -0.0005 5 6 4.3306 2.5033 0.0001 6 6 4.2813 0.0017 -0.0005 7 6 5.7883 0.0132 -0.0017 8 8 6.2629 0.3660 1.2992 9 14 6.4219 -1.6789 -0.4560 10 6 3.6021 -1.1993 -0.0005 11 6 2.2066 -1.2081 0.0062 12 6 1.4721 -2.4912 0.0129 13 8 0.2616 -2.4992 -0.0969 14 7 2.1449 -3.6520 0.1406 15 6 1.4172 -4.9235 0.1477 16 1 0.3844 -4.8182 0.4803 17 6 1.5658 -5.7256 -1.1558 18 6 2.8104 -6.3734 -0.5198 19 1 3.7328 -5.8238 -0.7076 20 6 2.9390 -7.8474 -0.8056 21 6 4.1874 -8.4023 -1.0308 22 9 5.2900 -7.6224 -0.9952 23 6 4.3053 -9.7566 -1.2928 24 6 3.1749 -10.5543 -1.3288 25 9 3.2884 -11.8759 -1.5850 26 6 1.9272 -9.9970 -1.1033 27 6 1.8112 -8.6460 -0.8372 28 6 2.1763 -6.0638 0.8465 29 1 -0.3632 -0.1172 -1.0210 30 1 -0.3633 0.9428 0.4089 31 1 -0.3634 -0.8255 0.6120 32 1 1.6583 2.1290 0.0004 33 1 4.5115 2.8179 1.0278 34 1 5.2833 2.3769 -0.5142 35 1 3.7385 3.2610 -0.5131 36 1 6.1455 0.7423 -0.7289 37 1 5.9827 -0.2407 1.9981 38 1 7.9068 -1.6806 -0.4613 39 1 5.9156 -2.6869 0.5098 40 1 4.1492 -2.1305 -0.0010 41 1 3.1109 -3.6456 0.2285 42 1 0.7504 -6.4273 -1.3322 43 1 1.7895 -5.1079 -2.0256 44 1 5.2786 -10.1904 -1.4682 45 1 1.0449 -10.6193 -1.1318 46 1 0.8383 -8.2131 -0.6573 47 1 2.8924 -5.7189 1.5923 48 1 1.5274 -6.8577 1.2167 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:30 Heat of formation + Delta-G solvation = -76.909468 kcal Electronic energy + Delta-G solvation = -33563.825384 eV Core-core repulsion = 28800.947777 eV Total energy + Delta-G solvation = -4762.877608 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.148 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -50.07117 -50.01279 -41.92285 -41.09968 -39.91710 -38.77899 -37.71549 -34.99018 -34.41605 -33.22800 -31.97056 -31.50661 -29.30643 -28.58936 -26.92179 -26.31978 -25.60168 -24.41217 -23.76853 -23.21581 -22.40332 -21.07530 -20.31267 -19.42626 -19.12834 -18.27438 -17.71295 -17.50185 -17.18461 -17.04622 -16.86188 -16.54409 -16.41128 -16.35769 -16.33796 -16.02784 -15.75764 -15.54025 -15.33075 -15.29308 -14.84883 -14.65659 -14.49531 -14.15300 -14.07598 -13.91856 -13.81773 -13.64212 -13.56247 -13.43755 -13.12588 -12.92794 -12.81070 -12.72984 -12.65227 -12.53626 -12.18362 -11.96535 -11.85592 -11.81331 -11.45357 -10.66757 -10.62045 -10.22098 -10.14906 -9.92058 -9.66932 -9.61172 -5.08685 -0.23790 -0.19360 -0.11961 0.15131 1.15327 1.40958 1.76075 1.84797 1.97499 2.18886 2.64963 2.76724 3.16704 3.27678 3.33666 3.37432 3.43415 3.47399 3.53031 3.57468 3.63875 3.71649 3.78508 3.80138 3.92010 4.05240 4.10376 4.15138 4.40969 4.44853 4.50795 4.50971 4.51929 4.60714 4.66147 4.69674 4.69934 4.71355 4.75642 4.81827 4.85473 4.86436 4.91558 4.95391 4.96491 5.04087 5.06653 5.14587 5.29079 5.45519 5.48754 5.56792 5.64041 5.79853 6.30359 6.37798 7.15200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.007 4.007 3 C -0.132 4.132 4 C -0.023 4.023 5 C -0.121 4.121 6 C -0.134 4.134 7 C -0.071 4.071 8 O -0.525 6.525 9 Si 0.680 3.320 10 C -0.079 4.079 11 C -0.146 4.146 12 C 0.564 3.436 13 O -0.524 6.524 14 N -0.713 5.713 15 C 0.122 3.878 16 H 0.110 0.890 17 C -0.141 4.141 18 C -0.077 4.077 19 H 0.103 0.897 20 C -0.114 4.114 21 C 0.133 3.867 22 F -0.129 7.129 23 C -0.190 4.190 24 C 0.127 3.873 25 F -0.130 7.130 26 C -0.159 4.159 27 C -0.060 4.060 28 C -0.136 4.136 29 H 0.079 0.921 30 H 0.060 0.940 31 H 0.097 0.903 32 H 0.133 0.867 33 H 0.080 0.920 34 H 0.074 0.926 35 H 0.069 0.931 36 H 0.120 0.880 37 H 0.375 0.625 38 H -0.253 1.253 39 H -0.258 1.258 40 H 0.127 0.873 41 H 0.399 0.601 42 H 0.098 0.902 43 H 0.080 0.920 44 H 0.149 0.851 45 H 0.145 0.855 46 H 0.146 0.854 47 H 0.078 0.922 48 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.424 0.468 -0.627 0.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.008 4.008 3 C -0.150 4.150 4 C -0.023 4.023 5 C -0.178 4.178 6 C -0.135 4.135 7 C -0.181 4.181 8 O -0.332 6.332 9 Si 0.581 3.419 10 C -0.098 4.098 11 C -0.150 4.150 12 C 0.353 3.647 13 O -0.401 6.401 14 N -0.365 5.365 15 C 0.016 3.984 16 H 0.128 0.872 17 C -0.180 4.180 18 C -0.095 4.095 19 H 0.121 0.879 20 C -0.116 4.116 21 C 0.114 3.886 22 F -0.107 7.107 23 C -0.209 4.209 24 C 0.108 3.892 25 F -0.108 7.108 26 C -0.178 4.178 27 C -0.078 4.078 28 C -0.174 4.174 29 H 0.097 0.903 30 H 0.079 0.921 31 H 0.115 0.885 32 H 0.151 0.849 33 H 0.098 0.902 34 H 0.092 0.908 35 H 0.088 0.912 36 H 0.138 0.862 37 H 0.223 0.777 38 H -0.177 1.177 39 H -0.183 1.183 40 H 0.144 0.856 41 H 0.234 0.766 42 H 0.116 0.884 43 H 0.098 0.902 44 H 0.167 0.833 45 H 0.163 0.837 46 H 0.163 0.837 47 H 0.097 0.903 48 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -0.501 0.231 -0.793 0.966 hybrid contribution 0.797 -0.104 1.092 1.356 sum 0.295 0.127 0.299 0.439 Atomic orbital electron populations 1.21140 0.89644 1.03366 1.03933 1.20103 0.97031 0.91251 0.92445 1.21042 0.93366 0.97881 1.02712 1.20003 0.93426 0.95164 0.93735 1.20928 1.00237 0.93336 1.03266 1.19968 0.96017 0.92741 1.04756 1.24957 0.91719 1.12947 0.88492 1.86619 1.76115 1.54152 1.16265 0.95041 0.81514 0.74984 0.90360 1.21185 0.93312 0.97607 0.97679 1.19583 0.92983 0.93145 1.09241 1.18225 0.87092 0.83435 0.75918 1.90750 1.13519 1.86946 1.48878 1.45635 1.10574 1.05241 1.75026 1.21829 0.97638 0.82173 0.96718 0.87230 1.23628 0.97170 0.99050 0.98141 1.21620 0.99723 0.90643 0.97517 0.87881 1.19790 0.91594 0.96714 1.03454 1.17142 0.82704 0.87901 1.00900 1.91527 1.51449 1.74055 1.93691 1.21083 1.00139 0.92789 1.06922 1.17343 0.93730 0.78074 1.00060 1.91561 1.96850 1.31195 1.91236 1.21258 0.96704 0.96313 1.03494 1.20772 0.98551 0.92044 0.96391 1.23452 0.99857 0.98081 0.95976 0.90283 0.92131 0.88509 0.84905 0.90192 0.90755 0.91184 0.86184 0.77705 1.17739 1.18343 0.85588 0.76571 0.88359 0.90171 0.83306 0.83742 0.83659 0.90321 0.87961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.15 8.75 36.01 0.32 0.16 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 3 C -0.13 -0.03 9.31 -39.64 -0.37 -0.40 16 4 C -0.02 0.00 5.89 -104.54 -0.62 -0.61 16 5 C -0.12 0.14 9.53 36.00 0.34 0.49 16 6 C -0.13 0.07 5.26 -104.68 -0.55 -0.48 16 7 C -0.07 0.08 2.04 36.01 0.07 0.16 16 8 O -0.53 -0.02 12.80 -35.23 -0.45 -0.47 16 9 Si 0.68 -1.24 30.24 -169.99 -5.14 -6.38 16 10 C -0.08 0.05 8.13 -39.18 -0.32 -0.27 16 11 C -0.15 -0.14 5.87 -104.96 -0.62 -0.76 16 12 C 0.56 0.89 7.70 -12.33 -0.09 0.80 16 13 O -0.52 -2.23 12.95 5.32 0.07 -2.16 16 14 N -0.71 0.69 5.21 -53.96 -0.28 0.41 16 15 C 0.12 -0.20 4.30 -67.12 -0.29 -0.49 16 16 H 0.11 -0.05 7.50 -51.93 -0.39 -0.44 16 17 C -0.14 0.33 7.27 -25.78 -0.19 0.14 16 18 C -0.08 0.17 3.79 -90.82 -0.34 -0.17 16 19 H 0.10 -0.22 7.44 -51.93 -0.39 -0.61 16 20 C -0.11 0.14 5.30 -104.55 -0.55 -0.42 16 21 C 0.13 0.03 7.24 -39.43 -0.29 -0.26 16 22 F -0.13 -0.14 16.36 2.25 0.04 -0.10 16 23 C -0.19 -0.04 10.01 -39.44 -0.39 -0.43 16 24 C 0.13 0.05 7.30 -39.43 -0.29 -0.24 16 25 F -0.13 -0.22 17.27 2.25 0.04 -0.18 16 26 C -0.16 0.21 10.02 -39.51 -0.40 -0.18 16 27 C -0.06 0.13 8.60 -39.60 -0.34 -0.21 16 28 C -0.14 0.39 7.29 -25.92 -0.19 0.20 16 29 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 30 H 0.06 -0.01 8.04 -51.93 -0.42 -0.43 16 31 H 0.10 0.27 5.82 -51.93 -0.30 -0.03 16 32 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16 33 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.07 -0.11 6.22 -51.93 -0.32 -0.43 16 35 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 36 H 0.12 -0.22 6.48 -51.93 -0.34 -0.56 16 37 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 38 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 39 H -0.26 0.25 6.68 56.52 0.38 0.63 16 40 H 0.13 -0.31 3.25 -52.49 -0.17 -0.48 16 41 H 0.40 -1.05 6.78 -40.82 -0.28 -1.33 16 42 H 0.10 -0.33 6.34 -51.92 -0.33 -0.65 16 43 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 45 H 0.14 -0.43 8.06 -52.49 -0.42 -0.85 16 46 H 0.15 -0.64 6.68 -52.49 -0.35 -1.00 16 47 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 48 H 0.10 -0.37 7.71 -51.93 -0.40 -0.77 16 LS Contribution 393.92 15.07 5.94 5.94 Total: 0.00 -6.36 393.92 -11.40 -17.75 By element: Atomic # 1 Polarization: -5.32 SS G_CDS: -5.89 Total: -11.21 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -5.72 Total: -3.60 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.28 Total: 0.41 kcal Atomic # 8 Polarization: -2.25 SS G_CDS: -0.38 Total: -2.63 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.08 Total: -0.29 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.14 Total: -6.38 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -6.36 -11.40 -17.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.156 kcal (2) G-P(sol) polarization free energy of solvation -6.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds