Wall clock time and date at job start Sun Mar 7 2021 00:10:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.36763 * 125.80248 * 2 1 4 4 C 1.47265 * 126.94156 * 359.95926 * 3 2 1 5 5 O 1.21633 * 119.99935 * 359.71453 * 4 3 2 6 6 N 1.34773 * 120.00141 * 179.97438 * 4 3 2 7 7 C 1.46500 * 120.00431 * 179.72637 * 6 4 3 8 8 H 1.09006 * 112.84642 * 336.19847 * 7 6 4 9 9 C 1.53774 * 113.61696 * 107.50253 * 7 6 4 10 10 C 1.53777 * 87.08072 * 89.12070 * 9 7 6 11 11 H 1.08997 * 113.69135 * 270.87338 * 10 9 7 12 12 C 1.50701 * 113.61682 * 139.98651 * 10 9 7 13 13 C 1.38447 * 119.99051 * 142.23118 * 12 10 9 14 14 F 1.35098 * 120.01031 * 359.97438 * 13 12 10 15 15 C 1.38442 * 119.97512 * 179.74926 * 13 12 10 16 16 C 1.38400 * 119.94828 * 0.49362 * 15 13 12 17 17 F 1.35104 * 120.01602 * 179.72828 * 16 15 13 18 18 C 1.38497 * 119.97341 * 359.75837 * 16 15 13 19 19 C 1.38183 * 120.02802 * 0.02562 * 18 16 15 20 20 C 1.53780 * 113.61736 * 205.00698 * 7 6 4 21 21 C 1.46680 * 106.11701 * 179.70325 * 3 2 1 22 22 C 1.34489 * 106.33285 * 0.25966 * 21 3 2 23 23 C 1.50698 * 125.56960 * 180.02562 * 22 21 3 24 24 O 1.42894 * 109.47181 * 299.99444 * 23 22 21 25 25 Si 1.86308 * 109.46720 * 180.02562 * 23 22 21 26 26 N 1.34659 * 125.80306 * 180.14637 * 2 1 3 27 27 H 1.08999 * 109.47087 * 89.99952 * 1 2 3 28 28 H 1.08995 * 109.46727 * 210.00290 * 1 2 3 29 29 H 1.08999 * 109.47160 * 330.00113 * 1 2 3 30 30 H 0.97000 * 120.00112 * 359.73074 * 6 4 3 31 31 H 1.09001 * 113.61556 * 203.66763 * 9 7 6 32 32 H 1.09000 * 113.61618 * 334.56933 * 9 7 6 33 33 H 1.07998 * 120.02892 * 180.25228 * 15 13 12 34 34 H 1.08006 * 119.98641 * 179.97438 * 18 16 15 35 35 H 1.07999 * 119.97449 * 179.97438 * 19 18 16 36 36 H 1.09002 * 113.61835 * 25.42623 * 20 7 6 37 37 H 1.08996 * 113.61604 * 156.24957 * 20 7 6 38 38 H 1.07998 * 126.83633 * 180.28320 * 21 3 2 39 39 H 1.08996 * 109.47858 * 59.99846 * 23 22 21 40 40 H 0.96701 * 114.00703 * 300.00685 * 24 23 22 41 41 H 1.48502 * 109.99878 * 179.97438 * 25 23 22 42 42 H 1.48501 * 109.99623 * 301.31527 * 25 23 22 43 43 H 0.97006 * 124.84591 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 -0.0008 5 8 0.6839 2.7839 -0.0069 6 7 2.7850 3.5054 -0.0002 7 6 2.3505 4.9044 -0.0071 8 1 1.3491 5.0346 -0.4175 9 6 2.5664 5.6232 1.3351 10 6 3.9652 5.9996 0.8188 11 1 4.7310 5.2590 1.0492 12 6 4.3826 7.4031 1.1749 13 6 5.6975 7.6681 1.5178 14 9 6.6062 6.6685 1.5338 15 6 6.0818 8.9585 1.8398 16 6 5.1486 9.9805 1.8284 17 9 5.5210 11.2393 2.1477 18 6 3.8327 9.7121 1.4900 19 6 3.4512 8.4245 1.1645 20 6 3.3899 5.8694 -0.6014 21 6 3.6882 0.6151 0.0073 22 6 3.6096 -0.7275 0.0052 23 6 4.7820 -1.6742 0.0113 24 8 5.5829 -1.4481 -1.1503 25 14 4.1615 -3.4309 0.0045 26 7 2.2948 -1.0921 -0.0028 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3632 -0.8899 0.5139 29 1 -0.3633 0.8900 0.5138 30 1 3.7311 3.2914 0.0048 31 1 1.9098 6.4807 1.4817 32 1 2.5838 4.9506 2.1927 33 1 7.1082 9.1669 2.1035 34 1 3.1042 10.5095 1.4814 35 1 2.4247 8.2162 0.9012 36 1 4.0723 5.3957 -1.3072 37 1 2.9583 6.7937 -0.9855 38 1 4.5890 1.2109 0.0135 39 1 5.3821 -1.5039 0.9051 40 1 5.1125 -1.5817 -1.9846 41 1 5.3081 -4.3746 0.0098 42 1 3.3008 -3.6701 1.1908 43 1 1.9734 -2.0074 -0.0055 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13428180_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:10:39 Heat of formation + Delta-G solvation = -60.616162 kcal Electronic energy + Delta-G solvation = -29610.119705 eV Core-core repulsion = 25066.286477 eV Total energy + Delta-G solvation = -4543.833228 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.00586 -49.96370 -42.51974 -41.38265 -39.85850 -38.54723 -37.82329 -34.47533 -32.82447 -32.31747 -31.86176 -31.23015 -28.98120 -26.80558 -26.53359 -25.47929 -24.36026 -23.57644 -22.67361 -21.60244 -20.70773 -20.16077 -19.28539 -18.75012 -18.23203 -17.84635 -17.26818 -17.00679 -16.98869 -16.80264 -16.62529 -16.40971 -16.28609 -15.80324 -15.62510 -15.44503 -15.29418 -15.10330 -14.90148 -14.54247 -14.39457 -14.13970 -13.99619 -13.88449 -13.71720 -13.55971 -13.47070 -13.41918 -12.82118 -12.73537 -12.62727 -12.58843 -12.29153 -12.09070 -11.74209 -11.34206 -10.84433 -10.54529 -10.14036 -10.03418 -9.82957 -9.59581 -9.16440 -5.34789 -0.13381 -0.06249 0.75557 0.98423 1.20303 1.34967 1.70199 1.95089 2.24922 2.38106 2.62619 2.82613 3.26184 3.27195 3.41516 3.45821 3.58961 3.60388 3.63224 3.80218 3.80712 3.87372 4.01097 4.09673 4.13114 4.17740 4.32805 4.46993 4.57145 4.61599 4.67624 4.69485 4.73776 4.75507 4.80762 4.85454 4.88541 4.96130 4.98474 5.01848 5.07642 5.22176 5.27544 5.65013 5.69588 5.70657 5.84544 6.29216 6.40611 6.68203 7.45658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.125 3.875 3 C -0.242 4.242 4 C 0.597 3.403 5 O -0.546 6.546 6 N -0.711 5.711 7 C 0.124 3.876 8 H 0.108 0.892 9 C -0.143 4.143 10 C -0.076 4.076 11 H 0.103 0.897 12 C -0.113 4.113 13 C 0.133 3.867 14 F -0.129 7.129 15 C -0.190 4.190 16 C 0.126 3.874 17 F -0.131 7.131 18 C -0.159 4.159 19 C -0.060 4.060 20 C -0.135 4.135 21 C -0.128 4.128 22 C -0.029 4.029 23 C -0.033 4.033 24 O -0.534 6.534 25 Si 0.672 3.328 26 N -0.545 5.545 27 H 0.082 0.918 28 H 0.066 0.934 29 H 0.103 0.897 30 H 0.401 0.599 31 H 0.096 0.904 32 H 0.077 0.923 33 H 0.149 0.851 34 H 0.144 0.856 35 H 0.146 0.854 36 H 0.079 0.921 37 H 0.100 0.900 38 H 0.147 0.853 39 H 0.125 0.875 40 H 0.381 0.619 41 H -0.244 1.244 42 H -0.252 1.252 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.723 -3.034 -2.394 4.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.006 3.994 3 C -0.252 4.252 4 C 0.387 3.613 5 O -0.425 6.425 6 N -0.361 5.361 7 C 0.019 3.981 8 H 0.126 0.874 9 C -0.182 4.182 10 C -0.094 4.094 11 H 0.121 0.879 12 C -0.115 4.115 13 C 0.113 3.887 14 F -0.107 7.107 15 C -0.210 4.210 16 C 0.107 3.893 17 F -0.109 7.109 18 C -0.178 4.178 19 C -0.078 4.078 20 C -0.173 4.173 21 C -0.152 4.152 22 C -0.137 4.137 23 C -0.145 4.145 24 O -0.338 6.338 25 Si 0.573 3.427 26 N -0.145 5.145 27 H 0.101 0.899 28 H 0.085 0.915 29 H 0.122 0.878 30 H 0.236 0.764 31 H 0.114 0.886 32 H 0.096 0.904 33 H 0.167 0.833 34 H 0.162 0.838 35 H 0.163 0.837 36 H 0.098 0.902 37 H 0.118 0.882 38 H 0.164 0.836 39 H 0.142 0.858 40 H 0.228 0.772 41 H -0.167 1.167 42 H -0.177 1.177 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -2.073 -3.633 -1.520 4.451 hybrid contribution 1.109 0.123 0.529 1.234 sum -0.964 -3.510 -0.992 3.773 Atomic orbital electron populations 1.20658 0.86512 1.04568 1.03945 1.20409 0.93794 0.85253 0.99919 1.20067 0.93059 0.91939 1.20100 1.17301 0.85189 0.83971 0.74841 1.90755 1.16556 1.84323 1.50888 1.45433 1.09808 1.04864 1.76044 1.21764 0.99584 0.80268 0.96517 0.87398 1.23589 0.95222 1.00936 0.98430 1.21563 0.97985 0.92449 0.97397 0.87867 1.19830 0.91731 0.97100 1.02796 1.17148 0.86471 0.84438 1.00607 1.91529 1.66022 1.59294 1.93854 1.21077 1.01710 0.91374 1.06813 1.17338 0.93016 0.79344 0.99617 1.91558 1.92058 1.37260 1.90024 1.21255 0.94812 0.98652 1.03089 1.20782 0.99849 0.90606 0.96564 1.23445 0.98121 1.00132 0.95626 1.21789 0.95653 0.92613 1.05183 1.20537 0.84365 0.95726 1.13082 1.24408 0.91617 1.06519 0.91976 1.86546 1.38927 1.92996 1.15349 0.95401 0.84147 0.75642 0.87510 1.41718 1.05554 1.08468 1.58719 0.89895 0.91507 0.87799 0.76411 0.88561 0.90440 0.83346 0.83777 0.83652 0.90223 0.88198 0.83578 0.85753 0.77150 1.16712 1.17694 0.74748 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.06 9.88 36.01 0.36 0.41 16 2 C 0.12 0.06 7.17 -81.88 -0.59 -0.52 16 3 C -0.24 -0.40 6.29 -103.36 -0.65 -1.05 16 4 C 0.60 1.62 7.81 -12.59 -0.10 1.52 16 5 O -0.55 -3.00 14.42 5.25 0.08 -2.92 16 6 N -0.71 -0.06 5.26 -54.14 -0.28 -0.35 16 7 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 8 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 9 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 10 C -0.08 0.10 3.78 -90.96 -0.34 -0.24 16 11 H 0.10 -0.11 7.44 -51.93 -0.39 -0.49 16 12 C -0.11 0.05 5.30 -104.55 -0.55 -0.50 16 13 C 0.13 0.13 7.24 -39.43 -0.29 -0.16 16 14 F -0.13 -0.24 16.36 2.25 0.04 -0.20 16 15 C -0.19 -0.15 10.01 -39.45 -0.39 -0.55 16 16 C 0.13 0.12 7.30 -39.43 -0.29 -0.17 16 17 F -0.13 -0.29 17.27 2.25 0.04 -0.25 16 18 C -0.16 0.12 10.02 -39.51 -0.40 -0.28 16 19 C -0.06 0.09 8.61 -39.60 -0.34 -0.25 16 20 C -0.14 0.28 7.29 -25.92 -0.19 0.09 16 21 C -0.13 -0.03 10.43 -37.50 -0.39 -0.42 16 22 C -0.03 0.02 6.11 -81.87 -0.50 -0.48 16 23 C -0.03 0.06 2.98 36.00 0.11 0.16 16 24 O -0.53 0.63 12.87 -35.23 -0.45 0.18 16 25 Si 0.67 -1.91 30.94 -169.99 -5.26 -7.17 16 26 N -0.55 0.80 5.41 -5.42 -0.03 0.77 16 27 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.10 0.15 6.47 -51.93 -0.34 -0.18 16 30 H 0.40 -0.64 7.82 -40.82 -0.32 -0.96 16 31 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 32 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 34 H 0.14 -0.35 8.06 -52.48 -0.42 -0.78 16 35 H 0.15 -0.54 6.65 -52.49 -0.35 -0.89 16 36 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 37 H 0.10 -0.29 7.73 -51.93 -0.40 -0.69 16 38 H 0.15 -0.15 7.70 -52.49 -0.40 -0.55 16 39 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 40 H 0.38 -1.83 8.70 45.56 0.40 -1.44 16 41 H -0.24 -0.15 7.11 56.52 0.40 0.25 16 42 H -0.25 0.18 7.11 56.52 0.40 0.58 16 43 H 0.41 -1.64 6.70 -40.82 -0.27 -1.91 16 LS Contribution 368.16 15.07 5.55 5.55 Total: 0.00 -8.00 368.16 -10.30 -18.30 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -4.94 Total: -11.09 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -5.03 Total: -2.81 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.31 Total: 0.42 kcal Atomic # 8 Polarization: -2.37 SS G_CDS: -0.38 Total: -2.74 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.08 Total: -0.45 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: -5.26 Total: -7.17 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -8.00 -10.30 -18.30 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13428180_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.318 kcal (2) G-P(sol) polarization free energy of solvation -8.000 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.318 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.298 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds