Wall clock time and date at job start Sat Mar 6 2021 19:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.47279 * 2 1 4 4 C 1.53004 * 109.46865 * 240.00254 * 2 1 3 5 5 O 1.45197 * 109.47141 * 120.00383 * 2 1 3 6 6 C 1.34635 * 116.99944 * 59.99766 * 5 2 1 7 7 O 1.21508 * 120.00396 * 0.02562 * 6 5 2 8 8 N 1.34778 * 119.99911 * 179.97438 * 6 5 2 9 9 C 1.46498 * 119.99920 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.46974 * 180.02562 * 9 8 6 11 11 H 1.08999 * 112.85192 * 316.19243 * 10 9 8 12 12 C 1.53950 * 113.74214 * 87.40532 * 10 9 8 13 13 C 1.53777 * 87.02131 * 139.94283 * 12 10 9 14 14 H 1.09002 * 113.61979 * 89.22720 * 13 12 10 15 15 N 1.46501 * 113.61723 * 220.04674 * 13 12 10 16 16 C 1.34776 * 120.00392 * 254.13589 * 15 13 12 17 17 O 1.21697 * 119.99755 * 0.02562 * 16 15 13 18 18 C 1.46671 * 120.00630 * 179.97438 * 16 15 13 19 19 C 1.37871 * 126.23980 * 179.97438 * 18 16 15 20 20 C 1.39834 * 107.08774 * 179.97438 * 19 18 16 21 21 C 1.50703 * 126.06639 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47055 * 300.00418 * 21 20 19 23 23 Si 1.86304 * 109.46911 * 180.02562 * 21 20 19 24 24 C 1.35448 * 107.86375 * 0.23068 * 20 19 18 25 25 N 1.35534 * 108.87376 * 359.62467 * 24 20 19 26 26 C 1.53783 * 87.17519 * 334.63752 * 13 12 10 27 27 H 1.09008 * 109.46671 * 299.99957 * 1 2 3 28 28 H 1.08998 * 109.47197 * 59.99414 * 1 2 3 29 29 H 1.08997 * 109.47276 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46665 * 180.02562 * 3 2 1 31 31 H 1.08995 * 109.47135 * 300.00785 * 3 2 1 32 32 H 1.09002 * 109.46562 * 60.00287 * 3 2 1 33 33 H 1.08997 * 109.47036 * 299.99978 * 4 2 1 34 34 H 1.09007 * 109.46863 * 60.00011 * 4 2 1 35 35 H 1.08993 * 109.47006 * 179.97438 * 4 2 1 36 36 H 0.97000 * 120.00064 * 0.02562 * 8 6 5 37 37 H 1.09001 * 109.47269 * 60.00433 * 9 8 6 38 38 H 1.08999 * 109.47799 * 300.00285 * 9 8 6 39 39 H 1.09001 * 113.61453 * 25.42107 * 12 10 9 40 40 H 1.09000 * 113.66432 * 254.46660 * 12 10 9 41 41 H 0.97005 * 119.99962 * 74.13508 * 15 13 12 42 42 H 1.08000 * 126.45499 * 0.02562 * 19 18 16 43 43 H 1.09002 * 109.47152 * 60.00226 * 21 20 19 44 44 H 0.96708 * 114.00101 * 299.99358 * 22 21 20 45 45 H 1.48497 * 110.00028 * 58.68223 * 23 21 20 46 46 H 1.48501 * 109.99652 * 179.97438 * 23 21 20 47 47 H 1.08009 * 125.56114 * 179.76937 * 24 20 19 48 48 H 0.97004 * 125.67700 * 180.18515 * 25 24 20 49 49 H 1.08997 * 113.61364 * 139.93727 * 26 13 12 50 50 H 1.09001 * 113.61190 * 270.84736 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3382 7 8 0.9515 -2.5097 0.5034 8 7 2.0680 -2.6658 2.4165 9 6 1.6739 -4.0669 2.5829 10 6 2.2741 -4.6150 3.8792 11 1 3.3151 -4.3241 4.0198 12 6 1.3952 -4.3735 5.1199 13 6 1.7846 -5.7907 5.5724 14 1 2.6915 -5.8226 6.1762 15 7 0.6771 -6.5412 6.1694 16 6 0.6367 -6.7369 7.5022 17 8 1.5200 -6.2897 8.2099 18 6 -0.4724 -7.4878 8.1001 19 6 -0.6413 -7.7632 9.4404 20 6 -1.8250 -8.4975 9.5630 21 6 -2.4149 -9.0217 10.8468 22 8 -1.4863 -9.9118 11.4692 23 14 -3.9963 -9.9345 10.4764 24 6 -2.3442 -8.6588 8.3224 25 7 -1.5345 -8.0455 7.4251 26 6 2.0208 -6.1174 4.0883 27 1 -0.3633 0.5139 0.8901 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1300 1.4424 -0.0005 31 1 1.6766 1.9564 -0.8899 32 1 1.6767 1.9563 0.8901 33 1 1.6766 -1.7489 -1.2493 34 1 1.6765 -0.2073 -2.1393 35 1 3.1299 -0.7208 -1.2496 36 1 2.6276 -2.2370 3.0827 37 1 2.0395 -4.6501 1.7377 38 1 0.5870 -4.1358 2.6287 39 1 0.3354 -4.2644 4.8897 40 1 1.7702 -3.5875 5.7754 41 1 -0.0272 -6.8973 5.6054 42 1 0.0162 -7.4668 10.2443 43 1 -2.6245 -8.1883 11.5174 44 1 -1.2534 -10.6788 10.9281 45 1 -3.7287 -11.0540 9.5382 46 1 -4.5876 -10.4570 11.7344 47 1 -3.2561 -9.1876 8.0870 48 1 -1.6780 -8.0085 6.4664 49 1 2.9000 -6.7371 3.9123 50 1 1.1323 -6.4859 3.5756 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437770_10543058.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:51:58 Heat of formation + Delta-G solvation = -79.340827 kcal Electronic energy + Delta-G solvation = -30399.613724 eV Core-core repulsion = 26009.151754 eV Total energy + Delta-G solvation = -4390.461970 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.52978 -41.74380 -41.03790 -39.44310 -38.19751 -37.75914 -35.88496 -34.99774 -34.30848 -32.54800 -30.81472 -29.08437 -28.33046 -28.29511 -26.97549 -26.61532 -24.98191 -23.45545 -22.59764 -21.53550 -21.23135 -20.90282 -20.60226 -19.84520 -19.06334 -17.84073 -17.56440 -17.35511 -17.21406 -16.92323 -16.58266 -16.43664 -16.00576 -15.92791 -15.67097 -15.43866 -15.42503 -14.90764 -14.85791 -14.49640 -14.42199 -14.37474 -13.81923 -13.75182 -13.58664 -13.45557 -13.40169 -13.26451 -13.05196 -12.85003 -12.83039 -12.54405 -12.41158 -12.36054 -12.24629 -11.94572 -11.82286 -11.63885 -11.29664 -11.15310 -10.97607 -10.52066 -10.26854 -10.18479 -9.97502 -9.34307 -4.97148 0.37438 1.18758 1.29724 1.52942 1.58956 1.88949 1.89716 1.99268 2.02401 2.32659 3.04665 3.19636 3.39803 3.48483 3.51316 3.57783 3.72074 3.77489 3.82767 3.86429 3.96776 3.98510 4.00640 4.22677 4.33634 4.43921 4.45438 4.53802 4.55647 4.59433 4.62473 4.71274 4.74379 4.77671 4.78885 4.83030 4.87407 4.88442 4.92455 5.01386 5.04136 5.08204 5.20840 5.34016 5.35528 5.44370 5.56707 5.59991 5.77022 6.16527 6.36693 6.40215 6.53436 7.08137 7.41899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.649 3.351 7 O -0.568 6.568 8 N -0.711 5.711 9 C 0.150 3.850 10 C -0.123 4.123 11 H 0.106 0.894 12 C -0.148 4.148 13 C 0.125 3.875 14 H 0.120 0.880 15 N -0.723 5.723 16 C 0.592 3.408 17 O -0.523 6.523 18 C -0.060 4.060 19 C -0.074 4.074 20 C -0.209 4.209 21 C -0.040 4.040 22 O -0.530 6.530 23 Si 0.682 3.318 24 C 0.037 3.963 25 N -0.535 5.535 26 C -0.134 4.134 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.086 0.914 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.088 0.912 40 H 0.078 0.922 41 H 0.395 0.605 42 H 0.151 0.849 43 H 0.116 0.884 44 H 0.374 0.626 45 H -0.261 1.261 46 H -0.258 1.258 47 H 0.176 0.824 48 H 0.418 0.582 49 H 0.084 0.916 50 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.799 0.249 -4.231 5.079 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.403 3.597 7 O -0.457 6.457 8 N -0.371 5.371 9 C 0.028 3.972 10 C -0.142 4.142 11 H 0.124 0.876 12 C -0.186 4.186 13 C 0.020 3.980 14 H 0.138 0.862 15 N -0.374 5.374 16 C 0.380 3.620 17 O -0.399 6.399 18 C -0.172 4.172 19 C -0.101 4.101 20 C -0.216 4.216 21 C -0.151 4.151 22 O -0.336 6.336 23 Si 0.583 3.417 24 C -0.100 4.100 25 N -0.132 5.132 26 C -0.173 4.173 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.105 0.895 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.105 0.895 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.092 0.908 38 H 0.090 0.910 39 H 0.107 0.893 40 H 0.097 0.903 41 H 0.229 0.771 42 H 0.168 0.832 43 H 0.133 0.867 44 H 0.222 0.778 45 H -0.185 1.185 46 H -0.183 1.183 47 H 0.193 0.807 48 H 0.255 0.745 49 H 0.102 0.898 50 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -2.952 0.086 -3.833 4.839 hybrid contribution 0.751 -0.632 -0.563 1.132 sum -2.201 -0.546 -4.397 4.947 Atomic orbital electron populations 1.22520 0.93870 1.04995 1.02715 1.22117 0.94431 0.91578 0.81871 1.21880 1.02349 0.92346 1.03343 1.22522 1.01616 1.03423 0.96552 1.86307 1.71481 1.23452 1.46721 1.18107 0.78832 0.80654 0.82156 1.90917 1.41048 1.70514 1.43217 1.44704 1.55883 1.12663 1.23858 1.21315 0.99862 0.78919 0.97116 1.22665 1.00926 0.96608 0.93999 0.87618 1.23636 1.00526 0.97809 0.96666 1.22524 0.91038 0.91219 0.93185 0.86189 1.45856 1.26978 1.57367 1.07156 1.17082 0.84307 0.78797 0.81861 1.90880 1.37875 1.50098 1.61007 1.20419 0.93542 1.10320 0.92961 1.21231 0.96995 0.98049 0.93805 1.19855 0.99360 1.07879 0.94532 1.24333 1.00262 0.97192 0.93279 1.86609 1.63143 1.37845 1.46014 0.95472 0.80187 0.83913 0.82103 1.21881 0.97660 1.01655 0.88821 1.41924 1.19186 1.42543 1.09502 1.23331 1.03308 0.95660 0.95002 0.92121 0.90932 0.89477 0.91381 0.89932 0.91381 0.89457 0.90935 0.92112 0.75791 0.90771 0.90952 0.89329 0.90306 0.77133 0.83176 0.86664 0.77838 1.18537 1.18289 0.80691 0.74451 0.89782 0.89061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.22 8.37 37.16 0.31 0.10 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.07 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.84 9.94 -40.31 -0.40 -1.24 16 6 C 0.65 1.63 8.06 54.06 0.44 2.07 16 7 O -0.57 -2.73 11.88 -19.28 -0.23 -2.96 16 8 N -0.71 0.46 5.56 -65.28 -0.36 0.10 16 9 C 0.15 -0.31 5.52 -4.04 -0.02 -0.34 16 10 C -0.12 0.47 3.75 -89.71 -0.34 0.13 16 11 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 12 C -0.15 0.42 7.45 -25.83 -0.19 0.22 16 13 C 0.13 -0.27 4.21 -67.12 -0.28 -0.56 16 14 H 0.12 -0.05 7.50 -51.93 -0.39 -0.44 16 15 N -0.72 1.44 5.36 -54.32 -0.29 1.15 16 16 C 0.59 1.00 7.79 -12.86 -0.10 0.90 16 17 O -0.52 -3.07 16.50 5.19 0.09 -2.99 16 18 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 19 C -0.07 -0.15 10.59 -39.12 -0.41 -0.56 16 20 C -0.21 0.01 5.44 -105.02 -0.57 -0.56 16 21 C -0.04 0.01 3.02 36.01 0.11 0.12 16 22 O -0.53 -0.93 12.88 -35.23 -0.45 -1.39 16 23 Si 0.68 -1.19 30.59 -169.99 -5.20 -6.39 16 24 C 0.04 -0.09 10.45 -16.91 -0.18 -0.27 16 25 N -0.54 1.53 5.99 -9.39 -0.06 1.47 16 26 C -0.13 0.56 7.39 -25.91 -0.19 0.37 16 27 H 0.06 0.06 8.14 -51.92 -0.42 -0.37 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 34 H 0.07 -0.01 8.14 -51.92 -0.42 -0.43 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.99 8.58 -40.82 -0.35 -1.34 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.07 -0.11 7.86 -51.93 -0.41 -0.52 16 39 H 0.09 -0.25 7.91 -51.93 -0.41 -0.66 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.39 -1.95 7.84 -40.82 -0.32 -2.27 16 42 H 0.15 0.46 8.06 -52.49 -0.42 0.03 16 43 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 44 H 0.37 -0.43 8.70 45.56 0.40 -0.03 16 45 H -0.26 0.03 7.11 56.52 0.40 0.43 16 46 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 47 H 0.18 -0.93 6.19 -52.48 -0.32 -1.26 16 48 H 0.42 -2.62 8.19 -40.82 -0.33 -2.95 16 49 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 50 H 0.09 -0.47 8.07 -51.93 -0.42 -0.89 16 LS Contribution 408.52 15.07 6.16 6.16 Total: 0.00 -10.83 408.52 -10.08 -20.91 By element: Atomic # 1 Polarization: -8.57 SS G_CDS: -7.86 Total: -16.43 kcal Atomic # 6 Polarization: 3.08 SS G_CDS: -1.47 Total: 1.61 kcal Atomic # 7 Polarization: 3.44 SS G_CDS: -0.71 Total: 2.73 kcal Atomic # 8 Polarization: -7.58 SS G_CDS: -1.00 Total: -8.58 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.20 Total: -6.39 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -10.83 -10.08 -20.91 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_10543058.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.431 kcal (2) G-P(sol) polarization free energy of solvation -10.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.262 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.910 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds