Wall clock time and date at job start Sat Mar 6 2021 19:51:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.47279 * 2 1 4 4 C 1.53004 * 109.46865 * 240.00254 * 2 1 3 5 5 O 1.45197 * 109.47141 * 120.00383 * 2 1 3 6 6 C 1.34635 * 116.99944 * 59.99766 * 5 2 1 7 7 O 1.21508 * 120.00396 * 0.02562 * 6 5 2 8 8 N 1.34778 * 119.99911 * 179.97438 * 6 5 2 9 9 C 1.46498 * 119.99920 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.46974 * 180.02562 * 9 8 6 11 11 H 1.08999 * 112.85192 * 316.19243 * 10 9 8 12 12 C 1.53950 * 113.74214 * 87.40532 * 10 9 8 13 13 C 1.53777 * 87.02131 * 139.94283 * 12 10 9 14 14 H 1.09002 * 113.61979 * 89.22720 * 13 12 10 15 15 N 1.46501 * 113.61723 * 220.04674 * 13 12 10 16 16 C 1.34776 * 120.00392 * 254.13589 * 15 13 12 17 17 O 1.21697 * 119.99755 * 0.02562 * 16 15 13 18 18 C 1.46671 * 120.00630 * 179.97438 * 16 15 13 19 19 C 1.37871 * 126.23980 * 179.97438 * 18 16 15 20 20 C 1.39834 * 107.08774 * 179.97438 * 19 18 16 21 21 C 1.50703 * 126.06639 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47055 * 300.00418 * 21 20 19 23 23 Si 1.86304 * 109.46911 * 180.02562 * 21 20 19 24 24 C 1.35448 * 107.86375 * 0.23068 * 20 19 18 25 25 N 1.35534 * 108.87376 * 359.62467 * 24 20 19 26 26 C 1.53783 * 87.17519 * 334.63752 * 13 12 10 27 27 H 1.09008 * 109.46671 * 299.99957 * 1 2 3 28 28 H 1.08998 * 109.47197 * 59.99414 * 1 2 3 29 29 H 1.08997 * 109.47276 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46665 * 180.02562 * 3 2 1 31 31 H 1.08995 * 109.47135 * 300.00785 * 3 2 1 32 32 H 1.09002 * 109.46562 * 60.00287 * 3 2 1 33 33 H 1.08997 * 109.47036 * 299.99978 * 4 2 1 34 34 H 1.09007 * 109.46863 * 60.00011 * 4 2 1 35 35 H 1.08993 * 109.47006 * 179.97438 * 4 2 1 36 36 H 0.97000 * 120.00064 * 0.02562 * 8 6 5 37 37 H 1.09001 * 109.47269 * 60.00433 * 9 8 6 38 38 H 1.08999 * 109.47799 * 300.00285 * 9 8 6 39 39 H 1.09001 * 113.61453 * 25.42107 * 12 10 9 40 40 H 1.09000 * 113.66432 * 254.46660 * 12 10 9 41 41 H 0.97005 * 119.99962 * 74.13508 * 15 13 12 42 42 H 1.08000 * 126.45499 * 0.02562 * 19 18 16 43 43 H 1.09002 * 109.47152 * 60.00226 * 21 20 19 44 44 H 0.96708 * 114.00101 * 299.99358 * 22 21 20 45 45 H 1.48497 * 110.00028 * 58.68223 * 23 21 20 46 46 H 1.48501 * 109.99652 * 179.97438 * 23 21 20 47 47 H 1.08009 * 125.56114 * 179.76937 * 24 20 19 48 48 H 0.97004 * 125.67700 * 180.18515 * 25 24 20 49 49 H 1.08997 * 113.61364 * 139.93727 * 26 13 12 50 50 H 1.09001 * 113.61190 * 270.84736 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3382 7 8 0.9515 -2.5097 0.5034 8 7 2.0680 -2.6658 2.4165 9 6 1.6739 -4.0669 2.5829 10 6 2.2741 -4.6150 3.8792 11 1 3.3151 -4.3241 4.0198 12 6 1.3952 -4.3735 5.1199 13 6 1.7846 -5.7907 5.5724 14 1 2.6915 -5.8226 6.1762 15 7 0.6771 -6.5412 6.1694 16 6 0.6367 -6.7369 7.5022 17 8 1.5200 -6.2897 8.2099 18 6 -0.4724 -7.4878 8.1001 19 6 -0.6413 -7.7632 9.4404 20 6 -1.8250 -8.4975 9.5630 21 6 -2.4149 -9.0217 10.8468 22 8 -1.4863 -9.9118 11.4692 23 14 -3.9963 -9.9345 10.4764 24 6 -2.3442 -8.6588 8.3224 25 7 -1.5345 -8.0455 7.4251 26 6 2.0208 -6.1174 4.0883 27 1 -0.3633 0.5139 0.8901 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1300 1.4424 -0.0005 31 1 1.6766 1.9564 -0.8899 32 1 1.6767 1.9563 0.8901 33 1 1.6766 -1.7489 -1.2493 34 1 1.6765 -0.2073 -2.1393 35 1 3.1299 -0.7208 -1.2496 36 1 2.6276 -2.2370 3.0827 37 1 2.0395 -4.6501 1.7377 38 1 0.5870 -4.1358 2.6287 39 1 0.3354 -4.2644 4.8897 40 1 1.7702 -3.5875 5.7754 41 1 -0.0272 -6.8973 5.6054 42 1 0.0162 -7.4668 10.2443 43 1 -2.6245 -8.1883 11.5174 44 1 -1.2534 -10.6788 10.9281 45 1 -3.7287 -11.0540 9.5382 46 1 -4.5876 -10.4570 11.7344 47 1 -3.2561 -9.1876 8.0870 48 1 -1.6780 -8.0085 6.4664 49 1 2.9000 -6.7371 3.9123 50 1 1.1323 -6.4859 3.5756 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_10543058.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:51:57 Heat of formation + Delta-G solvation = -84.079929 kcal Electronic energy + Delta-G solvation = -30399.819227 eV Core-core repulsion = 26009.151754 eV Total energy + Delta-G solvation = -4390.667473 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.48667 -41.83969 -40.96707 -39.48760 -38.27756 -37.80441 -35.97701 -35.05978 -34.33057 -32.50877 -30.80133 -29.01566 -28.37994 -28.31519 -26.74374 -26.58861 -24.94064 -23.48934 -22.55069 -21.48746 -21.25789 -20.86814 -20.55764 -19.77743 -19.10829 -17.85674 -17.59632 -17.39673 -17.30950 -16.84894 -16.53457 -16.40631 -15.99635 -15.93046 -15.70296 -15.46688 -15.44853 -14.87211 -14.85612 -14.49154 -14.45180 -14.41397 -13.85312 -13.53274 -13.46778 -13.42709 -13.35065 -13.18334 -13.01876 -12.91958 -12.87997 -12.52467 -12.45304 -12.40589 -12.24141 -11.82270 -11.75813 -11.48778 -11.40433 -11.27534 -11.12576 -10.51494 -10.26185 -10.17964 -9.94387 -9.29023 -4.84476 0.35609 1.16729 1.37826 1.57462 1.68680 1.74315 1.95090 2.09774 2.16136 2.24451 3.10958 3.39963 3.54249 3.56521 3.70696 3.73140 3.76061 3.78382 3.83659 3.93197 3.98508 4.17574 4.18096 4.36253 4.40321 4.50530 4.59949 4.61414 4.69389 4.72190 4.74760 4.75191 4.80217 4.81079 4.85587 4.86188 4.90968 4.96475 5.02146 5.04898 5.07466 5.16868 5.25619 5.25981 5.35400 5.49513 5.58008 5.59674 5.73772 6.35664 6.37276 6.52076 6.62586 7.05988 7.32113 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.701 5.701 9 C 0.152 3.848 10 C -0.109 4.109 11 H 0.112 0.888 12 C -0.145 4.145 13 C 0.115 3.885 14 H 0.099 0.901 15 N -0.704 5.704 16 C 0.588 3.412 17 O -0.577 6.577 18 C -0.070 4.070 19 C -0.105 4.105 20 C -0.225 4.225 21 C -0.061 4.061 22 O -0.558 6.558 23 Si 0.790 3.210 24 C 0.061 3.939 25 N -0.514 5.514 26 C -0.120 4.120 27 H 0.061 0.939 28 H 0.086 0.914 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.068 0.932 33 H 0.064 0.936 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.416 0.584 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.093 0.907 40 H 0.067 0.933 41 H 0.412 0.588 42 H 0.123 0.877 43 H 0.108 0.892 44 H 0.384 0.616 45 H -0.270 1.270 46 H -0.314 1.314 47 H 0.215 0.785 48 H 0.437 0.563 49 H 0.089 0.911 50 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.062 -0.020 -6.247 7.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.361 5.361 9 C 0.030 3.970 10 C -0.129 4.129 11 H 0.131 0.869 12 C -0.183 4.183 13 C 0.011 3.989 14 H 0.117 0.883 15 N -0.355 5.355 16 C 0.377 3.623 17 O -0.457 6.457 18 C -0.183 4.183 19 C -0.133 4.133 20 C -0.232 4.232 21 C -0.169 4.169 22 O -0.366 6.366 23 Si 0.694 3.306 24 C -0.078 4.078 25 N -0.112 5.112 26 C -0.159 4.159 27 H 0.080 0.920 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.252 0.748 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.111 0.889 40 H 0.086 0.914 41 H 0.249 0.751 42 H 0.141 0.859 43 H 0.126 0.874 44 H 0.233 0.767 45 H -0.195 1.195 46 H -0.243 1.243 47 H 0.231 0.769 48 H 0.279 0.721 49 H 0.107 0.893 50 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -4.198 -0.164 -5.918 7.257 hybrid contribution 1.146 -0.549 0.120 1.276 sum -3.052 -0.713 -5.798 6.591 Atomic orbital electron populations 1.22470 0.93982 1.03729 1.03486 1.22350 0.94509 0.92548 0.81551 1.21895 1.02437 0.90986 1.04220 1.22472 1.01611 1.02280 0.97322 1.86312 1.71572 1.23443 1.47271 1.18371 0.78824 0.80770 0.82563 1.90901 1.42355 1.71002 1.44337 1.44775 1.55233 1.13026 1.23069 1.21376 0.99847 0.78087 0.97675 1.22565 1.00920 0.96855 0.92522 0.86941 1.23610 1.00937 0.96937 0.96843 1.22562 0.90287 0.92013 0.94075 0.88335 1.45715 1.27293 1.56332 1.06113 1.17286 0.83930 0.78418 0.82647 1.90847 1.39909 1.52505 1.62416 1.20155 0.94373 1.11028 0.92788 1.21218 0.98108 0.99796 0.94130 1.19891 0.99097 1.08509 0.95683 1.24769 1.01424 0.97471 0.93265 1.86567 1.64161 1.38687 1.47162 0.94321 0.76399 0.81189 0.78731 1.22372 0.97872 0.99849 0.87676 1.41855 1.17715 1.41124 1.10495 1.23302 1.04317 0.95310 0.92955 0.92011 0.89474 0.91673 0.91235 0.88309 0.91249 0.91685 0.89478 0.91997 0.74755 0.91083 0.91137 0.88872 0.91373 0.75100 0.85938 0.87370 0.76692 1.19549 1.24253 0.76856 0.72111 0.89258 0.87305 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 2 C 0.13 0.32 1.13 -10.79 -0.01 0.30 16 3 C -0.14 0.31 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.47 8.37 71.98 0.60 0.13 16 5 O -0.37 -1.87 9.94 -55.45 -0.55 -2.42 16 6 C 0.64 3.60 8.06 129.79 1.05 4.64 16 7 O -0.59 -6.32 11.88 19.81 0.24 -6.08 16 8 N -0.70 0.86 5.56 -590.85 -3.29 -2.43 16 9 C 0.15 -0.70 5.52 86.38 0.48 -0.22 16 10 C -0.11 0.90 3.75 -10.21 -0.04 0.86 16 11 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 12 C -0.14 0.81 7.45 31.18 0.23 1.04 16 13 C 0.12 -0.47 4.21 45.52 0.19 -0.28 16 14 H 0.10 0.09 7.50 -2.39 -0.02 0.07 16 15 N -0.70 2.83 5.36 -444.00 -2.38 0.45 16 16 C 0.59 2.81 7.79 86.44 0.67 3.48 16 17 O -0.58 -8.51 16.50 -4.34 -0.07 -8.58 16 18 C -0.07 -0.14 7.06 40.35 0.28 0.15 16 19 C -0.11 -0.64 10.59 22.57 0.24 -0.40 16 20 C -0.23 -0.03 5.44 -20.12 -0.11 -0.14 16 21 C -0.06 -0.02 3.02 71.24 0.22 0.19 16 22 O -0.56 -2.85 12.88 -148.98 -1.92 -4.77 16 23 Si 0.79 -3.53 30.59 68.60 2.10 -1.44 16 24 C 0.06 -0.41 10.45 83.48 0.87 0.46 16 25 N -0.51 3.75 5.99 -183.62 -1.10 2.65 16 26 C -0.12 1.13 7.39 31.12 0.23 1.36 16 27 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 28 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 29 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 30 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 31 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.06 0.50 5.88 -2.39 -0.01 0.48 16 34 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 35 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 36 H 0.42 -2.05 8.58 -92.71 -0.80 -2.84 16 37 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.07 -0.26 7.86 -2.39 -0.02 -0.28 16 39 H 0.09 -0.58 7.91 -2.39 -0.02 -0.59 16 40 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.41 -4.67 7.84 -92.70 -0.73 -5.40 16 42 H 0.12 1.30 8.06 -2.91 -0.02 1.28 16 43 H 0.11 0.09 7.96 -2.39 -0.02 0.07 16 44 H 0.38 -0.46 8.70 -74.05 -0.64 -1.10 16 45 H -0.27 0.75 7.11 99.48 0.71 1.46 16 46 H -0.31 -1.56 7.11 99.48 0.71 -0.86 16 47 H 0.22 -3.16 6.19 -2.91 -0.02 -3.18 16 48 H 0.44 -6.67 8.19 -92.71 -0.76 -7.43 16 49 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 50 H 0.11 -1.36 8.07 -2.39 -0.02 -1.38 16 Total: 0.00 -29.73 408.52 -2.72 -32.45 By element: Atomic # 1 Polarization: -20.62 SS G_CDS: -1.89 Total: -22.51 kcal Atomic # 6 Polarization: 6.53 SS G_CDS: 6.14 Total: 12.67 kcal Atomic # 7 Polarization: 7.43 SS G_CDS: -6.76 Total: 0.67 kcal Atomic # 8 Polarization: -19.54 SS G_CDS: -2.31 Total: -21.85 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.10 Total: -1.44 kcal Total: -29.73 -2.72 -32.45 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_10543058.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.629 kcal (2) G-P(sol) polarization free energy of solvation -29.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds