Wall clock time and date at job start Sat Mar 6 2021 19:52:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53008 * 109.47008 * 2 1 4 4 C 1.52994 * 109.47286 * 239.99698 * 2 1 3 5 5 O 1.45202 * 109.46964 * 119.99510 * 2 1 3 6 6 C 1.34638 * 116.99776 * 60.00058 * 5 2 1 7 7 O 1.21513 * 119.99956 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99672 * 180.27362 * 6 5 2 9 9 C 1.46505 * 119.99722 * 179.72257 * 8 6 5 10 10 C 1.52999 * 109.47189 * 180.02562 * 9 8 6 11 11 H 1.09001 * 112.84729 * 43.80495 * 10 9 8 12 12 C 1.53774 * 113.61508 * 175.00465 * 10 9 8 13 13 C 1.53785 * 87.08310 * 139.98201 * 12 10 9 14 14 H 1.08997 * 113.61640 * 89.19661 * 13 12 10 15 15 N 1.46500 * 113.61418 * 220.01979 * 13 12 10 16 16 C 1.34773 * 120.00040 * 204.99461 * 15 13 12 17 17 O 1.21555 * 119.99801 * 0.02562 * 16 15 13 18 18 C 1.47853 * 120.00334 * 179.97438 * 16 15 13 19 19 C 1.39542 * 120.13510 * 0.02562 * 18 16 15 20 20 C 1.38072 * 119.83697 * 179.97438 * 19 18 16 21 21 Br 1.89103 * 119.93405 * 179.97438 * 20 19 18 22 22 C 1.38424 * 120.12982 * 359.97438 * 20 19 18 23 23 C 1.38361 * 120.27861 * 0.02562 * 22 20 19 24 24 C 1.50695 * 119.92129 * 179.97438 * 23 22 20 25 25 O 1.42904 * 109.47225 * 245.00134 * 24 23 22 26 26 Si 1.86299 * 109.47094 * 5.00365 * 24 23 22 27 27 C 1.37949 * 120.15559 * 359.74317 * 23 22 20 28 28 C 1.53788 * 113.61260 * 272.50493 * 10 9 8 29 29 H 1.08997 * 109.47363 * 300.00806 * 1 2 3 30 30 H 1.09005 * 109.46795 * 60.00585 * 1 2 3 31 31 H 1.09001 * 109.46811 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.46984 * 179.97438 * 3 2 1 33 33 H 1.08996 * 109.46584 * 299.99377 * 3 2 1 34 34 H 1.08998 * 109.47272 * 59.99708 * 3 2 1 35 35 H 1.08995 * 109.47307 * 299.99583 * 4 2 1 36 36 H 1.08999 * 109.47211 * 60.00515 * 4 2 1 37 37 H 1.09010 * 109.46887 * 180.02562 * 4 2 1 38 38 H 0.97000 * 120.00483 * 359.73141 * 8 6 5 39 39 H 1.08995 * 109.47192 * 300.00563 * 9 8 6 40 40 H 1.09001 * 109.46711 * 60.00584 * 9 8 6 41 41 H 1.09005 * 113.61577 * 254.52751 * 12 10 9 42 42 H 1.09000 * 113.61730 * 25.34845 * 12 10 9 43 43 H 0.96999 * 120.00258 * 24.99704 * 15 13 12 44 44 H 1.08000 * 120.08112 * 359.95236 * 19 18 16 45 45 H 1.07993 * 119.86115 * 179.97438 * 22 20 19 46 46 H 1.09000 * 109.47188 * 125.00102 * 24 23 22 47 47 H 0.96708 * 113.99774 * 179.97438 * 25 24 23 48 48 H 1.48506 * 110.00173 * 178.68220 * 26 24 23 49 49 H 1.48501 * 109.99908 * 299.99801 * 26 24 23 50 50 H 1.08000 * 120.06093 * 180.25102 * 27 23 22 51 51 H 1.09001 * 113.61296 * 334.56247 * 28 10 9 52 52 H 1.08997 * 113.61636 * 105.47179 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3385 7 8 0.9516 -2.5096 0.5037 8 7 2.0630 -2.6638 2.4199 9 6 1.6643 -4.0633 2.5893 10 6 2.2592 -4.6094 3.8887 11 1 2.1648 -3.9138 4.7226 12 6 1.8004 -6.0384 4.2235 13 6 3.2434 -6.3105 4.6805 14 1 3.4190 -6.0816 5.7316 15 7 3.7415 -7.6333 4.2953 16 6 4.7272 -8.2155 5.0064 17 8 5.2026 -7.6433 5.9677 18 6 5.2295 -9.5508 4.6180 19 6 4.6854 -10.2105 3.5153 20 6 5.1595 -11.4570 3.1578 21 35 4.4236 -12.3537 1.6644 22 6 6.1724 -12.0515 3.8904 23 6 6.7156 -11.4019 4.9847 24 6 7.8176 -12.0569 5.7769 25 8 7.3523 -12.3372 7.0986 26 14 8.3200 -13.6464 4.9452 27 6 6.2540 -10.1542 5.3494 28 6 3.6749 -5.1870 3.7231 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6767 1.9563 -0.8900 34 1 1.6766 1.9564 0.8899 35 1 1.6768 -1.7489 -1.2491 36 1 1.6768 -0.2075 -2.1392 37 1 3.1301 -0.7216 -1.2488 38 1 2.6225 -2.2349 3.0862 39 1 0.5771 -4.1287 2.6321 40 1 2.0307 -4.6499 1.7468 41 1 1.0705 -6.0846 5.0317 42 1 1.5014 -6.6171 3.3495 43 1 3.3618 -8.0900 3.5284 44 1 3.8951 -9.7473 2.9432 45 1 6.5397 -13.0268 3.6072 46 1 8.6757 -11.3867 5.8283 47 1 8.0111 -12.7607 7.6660 48 1 9.4279 -14.2861 5.6992 49 1 7.1586 -14.5688 4.8689 50 1 6.6818 -9.6468 6.2014 51 1 3.8897 -5.5333 2.7121 52 1 4.4581 -4.5457 4.1273 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_12335870.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:52:57 Heat of formation + Delta-G solvation = -91.238311 kcal Electronic energy + Delta-G solvation = -33804.427649 eV Core-core repulsion = 29010.831533 eV Total energy + Delta-G solvation = -4793.596116 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.103 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -41.87079 -41.65164 -40.56215 -39.44101 -38.27116 -37.80563 -35.97373 -35.09016 -34.46150 -33.67894 -32.89912 -30.48337 -29.06667 -28.37196 -28.30698 -27.03748 -26.70804 -25.80168 -23.77640 -22.71657 -22.70447 -21.53714 -21.33919 -20.48636 -19.13096 -18.84644 -18.64560 -17.90032 -17.65669 -17.43732 -17.31127 -16.80704 -16.33715 -16.24670 -16.18263 -15.91900 -15.56172 -15.47349 -15.36731 -15.01037 -14.84673 -14.74936 -14.43097 -14.27960 -14.04214 -13.69212 -13.47371 -13.42643 -13.34150 -13.16511 -13.01504 -12.91057 -12.87028 -12.84168 -12.51330 -12.40861 -12.38973 -12.21624 -12.01520 -11.86070 -11.72634 -11.49611 -11.44210 -11.38988 -11.15344 -11.09331 -10.60718 -10.35661 -10.20834 -10.05667 -9.90536 -4.98858 -0.52235 -0.16305 0.41673 1.17841 1.19378 1.50221 1.55051 1.75825 1.88454 2.00548 2.43814 3.12437 3.14886 3.35824 3.45104 3.58109 3.59103 3.73381 3.74183 3.78947 3.79749 3.81497 3.87288 3.94058 3.98485 4.13516 4.19679 4.29498 4.41422 4.49599 4.51666 4.60712 4.62997 4.72016 4.75061 4.75904 4.76566 4.81960 4.83564 4.87022 4.87108 4.92490 4.99330 5.05947 5.08509 5.09265 5.18609 5.26510 5.27450 5.35649 5.37243 5.54407 5.59656 6.37564 6.39137 6.52306 7.03864 7.33773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.700 5.700 9 C 0.151 3.849 10 C -0.109 4.109 11 H 0.114 0.886 12 C -0.124 4.124 13 C 0.115 3.885 14 H 0.102 0.898 15 N -0.700 5.700 16 C 0.562 3.438 17 O -0.572 6.572 18 C -0.137 4.137 19 C -0.044 4.044 20 C -0.100 4.100 21 Br -0.028 7.028 22 C -0.065 4.065 23 C -0.079 4.079 24 C -0.087 4.087 25 O -0.557 6.557 26 Si 0.757 3.243 27 C -0.030 4.030 28 C -0.144 4.144 29 H 0.061 0.939 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.061 0.939 38 H 0.416 0.584 39 H 0.070 0.930 40 H 0.070 0.930 41 H 0.089 0.911 42 H 0.107 0.893 43 H 0.414 0.586 44 H 0.164 0.836 45 H 0.152 0.848 46 H 0.102 0.898 47 H 0.398 0.602 48 H -0.279 1.279 49 H -0.290 1.290 50 H 0.133 0.867 51 H 0.093 0.907 52 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.634 0.744 -2.560 3.127 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.394 3.606 7 O -0.486 6.486 8 N -0.360 5.360 9 C 0.029 3.971 10 C -0.128 4.128 11 H 0.132 0.868 12 C -0.162 4.162 13 C 0.010 3.990 14 H 0.120 0.880 15 N -0.351 5.351 16 C 0.350 3.650 17 O -0.452 6.452 18 C -0.141 4.141 19 C -0.064 4.064 20 C -0.179 4.179 21 Br 0.058 6.942 22 C -0.084 4.084 23 C -0.080 4.080 24 C -0.195 4.195 25 O -0.367 6.367 26 Si 0.661 3.339 27 C -0.049 4.049 28 C -0.182 4.182 29 H 0.080 0.920 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.088 0.912 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.080 0.920 38 H 0.253 0.747 39 H 0.088 0.912 40 H 0.088 0.912 41 H 0.107 0.893 42 H 0.125 0.875 43 H 0.253 0.747 44 H 0.182 0.818 45 H 0.169 0.831 46 H 0.120 0.880 47 H 0.249 0.751 48 H -0.205 1.205 49 H -0.217 1.217 50 H 0.151 0.849 51 H 0.111 0.889 52 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 0.864 0.038 -3.070 3.189 hybrid contribution 0.321 0.030 1.664 1.694 sum 1.184 0.068 -1.406 1.840 Atomic orbital electron populations 1.22472 0.94027 1.03711 1.03491 1.22344 0.94469 0.92559 0.81556 1.21894 1.02436 0.90964 1.04225 1.22471 1.01606 1.02280 0.97335 1.86311 1.71596 1.23415 1.47246 1.18379 0.78798 0.80772 0.82610 1.90906 1.42305 1.70998 1.44415 1.44765 1.55247 1.13139 1.22875 1.21384 0.99955 0.78202 0.97528 1.22534 0.96017 0.97107 0.97159 0.86787 1.23323 0.95161 0.94738 1.02998 1.22602 0.95372 0.81116 0.99903 0.87956 1.45824 1.37003 1.19880 1.32435 1.18310 0.79675 0.84934 0.82118 1.90790 1.59377 1.65689 1.29386 1.19912 1.00200 0.95480 0.98549 1.21467 0.98079 0.92420 0.94474 1.21705 1.01006 0.97272 0.97921 1.96849 1.83468 1.77009 1.36888 1.21358 0.93685 0.99734 0.93626 1.19344 0.98482 0.94335 0.95808 1.25017 0.97396 1.10094 0.87017 1.86547 1.44723 1.82818 1.22640 0.94244 0.77757 0.74001 0.87940 1.21279 0.92961 0.93582 0.97095 1.23584 0.96982 0.97128 1.00547 0.91970 0.89495 0.91728 0.91225 0.88327 0.91218 0.91710 0.89491 0.91987 0.74720 0.91189 0.91181 0.89281 0.87508 0.74707 0.81818 0.83067 0.87980 0.75054 1.20498 1.21737 0.84888 0.88852 0.91063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.34 16 3 C -0.14 0.28 8.85 71.98 0.64 0.92 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 5 O -0.37 -1.96 9.94 -55.47 -0.55 -2.52 16 6 C 0.64 3.87 8.06 129.79 1.05 4.91 16 7 O -0.60 -6.69 11.88 19.80 0.24 -6.46 16 8 N -0.70 0.61 5.56 -590.84 -3.29 -2.68 16 9 C 0.15 -0.59 5.51 86.38 0.48 -0.11 16 10 C -0.11 0.85 3.75 -10.27 -0.04 0.81 16 11 H 0.11 -1.03 8.14 -2.39 -0.02 -1.05 16 12 C -0.12 1.04 7.39 31.12 0.23 1.27 16 13 C 0.11 -0.44 4.24 45.52 0.19 -0.24 16 14 H 0.10 0.05 7.46 -2.39 -0.02 0.03 16 15 N -0.70 2.10 5.31 -442.89 -2.35 -0.25 16 16 C 0.56 2.35 7.77 86.79 0.67 3.02 16 17 O -0.57 -7.13 15.95 -3.89 -0.06 -7.19 16 18 C -0.14 -0.28 5.87 -20.09 -0.12 -0.40 16 19 C -0.04 0.10 9.28 22.55 0.21 0.31 16 20 C -0.10 0.08 6.22 22.27 0.14 0.22 16 21 Br -0.03 0.04 33.69 -20.37 -0.69 -0.65 16 22 C -0.06 0.02 8.40 22.34 0.19 0.20 16 23 C -0.08 -0.11 5.38 -19.91 -0.11 -0.21 16 24 C -0.09 0.13 2.79 71.23 0.20 0.33 16 25 O -0.56 -0.95 12.81 -148.98 -1.91 -2.86 16 26 Si 0.76 -2.45 29.84 68.60 2.05 -0.40 16 27 C -0.03 -0.12 9.23 22.53 0.21 0.09 16 28 C -0.14 0.80 7.43 31.13 0.23 1.03 16 29 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 30 H 0.09 -0.04 8.14 -2.38 -0.02 -0.05 16 31 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 32 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 33 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 34 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 35 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 36 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 38 H 0.42 -2.01 8.58 -92.71 -0.80 -2.81 16 39 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 40 H 0.07 -0.19 7.84 -2.39 -0.02 -0.21 16 41 H 0.09 -0.77 8.14 -2.38 -0.02 -0.79 16 42 H 0.11 -1.15 8.08 -2.39 -0.02 -1.17 16 43 H 0.41 -3.62 6.76 -92.71 -0.63 -4.25 16 44 H 0.16 -1.37 6.40 -2.91 -0.02 -1.38 16 45 H 0.15 -0.43 4.85 -2.91 -0.01 -0.45 16 46 H 0.10 -0.55 7.96 -2.39 -0.02 -0.57 16 47 H 0.40 -2.56 8.74 -74.05 -0.65 -3.21 16 48 H -0.28 -0.19 7.11 99.48 0.71 0.52 16 49 H -0.29 -0.98 7.04 99.48 0.70 -0.28 16 50 H 0.13 0.82 7.65 -2.91 -0.02 0.80 16 51 H 0.09 -0.55 7.90 -2.39 -0.02 -0.57 16 52 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 Total: 0.00 -23.69 440.74 -2.25 -25.95 By element: Atomic # 1 Polarization: -14.52 SS G_CDS: -1.05 Total: -15.57 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: 5.36 Total: 12.62 kcal Atomic # 7 Polarization: 2.71 SS G_CDS: -5.63 Total: -2.92 kcal Atomic # 8 Polarization: -16.74 SS G_CDS: -2.29 Total: -19.03 kcal Atomic # 14 Polarization: -2.45 SS G_CDS: 2.05 Total: -0.40 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -23.69 -2.25 -25.95 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_12335870.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.292 kcal (2) G-P(sol) polarization free energy of solvation -23.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.238 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds