Wall clock time and date at job start Sat Mar 6 2021 19:53:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53006 * 109.46881 * 2 1 4 4 C 1.53002 * 109.47372 * 240.00156 * 2 1 3 5 5 O 1.45200 * 109.47268 * 119.99309 * 2 1 3 6 6 C 1.34640 * 116.99380 * 60.00581 * 5 2 1 7 7 O 1.21510 * 120.00190 * 359.97438 * 6 5 2 8 8 N 1.34774 * 119.99868 * 179.97438 * 6 5 2 9 9 C 1.46498 * 120.00191 * 179.97438 * 8 6 5 10 10 C 1.53006 * 109.47293 * 180.02562 * 9 8 6 11 11 H 1.09002 * 112.84791 * 314.66879 * 10 9 8 12 12 C 1.53781 * 113.61570 * 85.86417 * 10 9 8 13 13 C 1.53954 * 87.01606 * 139.95232 * 12 10 9 14 14 H 1.09002 * 113.61476 * 89.20153 * 13 12 10 15 15 N 1.46502 * 113.66447 * 220.06376 * 13 12 10 16 16 C 1.34773 * 120.00191 * 252.56401 * 15 13 12 17 17 O 1.21570 * 119.99989 * 0.02562 * 16 15 13 18 18 C 1.47700 * 120.00048 * 180.02562 * 16 15 13 19 19 C 1.39806 * 120.15355 * 179.72292 * 18 16 15 20 20 F 1.35095 * 120.08541 * 359.97438 * 19 18 16 21 21 C 1.38311 * 119.82875 * 179.73874 * 19 18 16 22 22 C 1.38182 * 120.14611 * 0.51661 * 21 19 18 23 23 C 1.50701 * 119.84447 * 179.73962 * 22 21 19 24 24 O 1.42901 * 109.47375 * 255.01950 * 23 22 21 25 25 Si 1.86295 * 109.46999 * 15.02025 * 23 22 21 26 26 C 1.38657 * 120.31641 * 359.76224 * 22 21 19 27 27 F 1.35101 * 119.92122 * 180.02562 * 26 22 21 28 28 C 1.38074 * 120.16681 * 359.97438 * 26 22 21 29 29 C 1.53778 * 87.11525 * 334.63802 * 13 12 10 30 30 H 1.08996 * 109.47415 * 300.00029 * 1 2 3 31 31 H 1.09002 * 109.46916 * 60.00602 * 1 2 3 32 32 H 1.09005 * 109.46885 * 179.97438 * 1 2 3 33 33 H 1.09000 * 109.47030 * 180.02562 * 3 2 1 34 34 H 1.09001 * 109.46492 * 299.99836 * 3 2 1 35 35 H 1.08996 * 109.47120 * 59.99791 * 3 2 1 36 36 H 1.09000 * 109.46558 * 299.99540 * 4 2 1 37 37 H 1.08992 * 109.47034 * 59.99422 * 4 2 1 38 38 H 1.09004 * 109.47034 * 180.02562 * 4 2 1 39 39 H 0.97002 * 120.00256 * 0.02562 * 8 6 5 40 40 H 1.09004 * 109.47049 * 60.00361 * 9 8 6 41 41 H 1.09000 * 109.47198 * 300.00034 * 9 8 6 42 42 H 1.08994 * 113.60887 * 254.53194 * 12 10 9 43 43 H 1.08997 * 113.61223 * 25.43567 * 12 10 9 44 44 H 0.97002 * 120.00108 * 72.56652 * 15 13 12 45 45 H 1.08003 * 119.92585 * 180.22903 * 21 19 18 46 46 H 1.09004 * 109.46978 * 135.01914 * 23 22 21 47 47 H 0.96700 * 113.99895 * 59.99799 * 24 23 22 48 48 H 1.48503 * 110.00033 * 58.68443 * 25 23 22 49 49 H 1.48508 * 110.00136 * 179.97438 * 25 23 22 50 50 H 1.07992 * 120.07731 * 180.02562 * 28 26 22 51 51 H 1.09000 * 113.61172 * 270.81328 * 29 13 12 52 52 H 1.09000 * 113.69145 * 139.92199 * 29 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0141 -0.6843 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5094 0.5041 8 7 2.0681 -2.6655 2.4167 9 6 1.6741 -4.0667 2.5833 10 6 2.2743 -4.6147 3.8796 11 1 3.3229 -4.3457 4.0074 12 6 1.4118 -4.3389 5.1226 13 6 1.7727 -5.7609 5.5893 14 1 2.6836 -5.8066 6.1862 15 7 0.6537 -6.4800 6.2033 16 6 0.6352 -6.6873 7.5349 17 8 1.5470 -6.2772 8.2266 18 6 -0.4927 -7.4128 8.1538 19 6 -0.5122 -7.6347 9.5340 20 9 0.5014 -7.1864 10.3064 21 6 -1.5744 -8.3101 10.1072 22 6 -2.6091 -8.7742 9.3176 23 6 -3.7602 -9.5144 9.9486 24 8 -3.6399 -10.9105 9.6681 25 14 -3.7346 -9.2469 11.7921 26 6 -2.5930 -8.5626 7.9474 27 9 -3.6090 -9.0195 7.1830 28 6 -1.5417 -7.8853 7.3622 29 6 1.9894 -6.1086 4.1071 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5138 -0.8901 32 1 -0.3633 -1.0277 -0.0005 33 1 3.1300 1.4426 -0.0005 34 1 1.6766 1.9563 -0.8900 35 1 1.6766 1.9564 0.8899 36 1 1.6768 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1392 38 1 3.1301 -0.7216 -1.2490 39 1 2.6277 -2.2367 3.0830 40 1 2.0399 -4.6499 1.7382 41 1 0.5872 -4.1355 2.6290 42 1 1.8101 -3.5534 5.7647 43 1 0.3531 -4.2083 4.8991 44 1 -0.0740 -6.8070 5.6515 45 1 -1.5929 -8.4791 11.1738 46 1 -4.6995 -9.1414 9.5403 47 1 -2.8256 -11.3102 10.0032 48 1 -3.8271 -7.7963 12.0961 49 1 -4.8654 -9.9713 12.4262 50 1 -1.5309 -7.7209 6.2949 51 1 1.0888 -6.4627 3.6055 52 1 2.8527 -6.7498 3.9293 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_12360598.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:53:10 Heat of formation + Delta-G solvation = -182.496537 kcal Electronic energy + Delta-G solvation = -37022.981691 eV Core-core repulsion = 31626.338373 eV Total energy + Delta-G solvation = -5396.643318 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.174 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -50.12696 -50.09799 -41.86720 -41.52946 -40.39912 -39.48641 -38.28809 -37.63723 -35.98423 -35.10103 -34.47761 -33.05819 -31.38162 -29.18695 -28.38623 -28.32038 -27.75505 -26.71700 -24.75088 -24.40167 -23.48583 -22.71265 -21.80156 -21.40516 -20.65301 -19.57887 -19.12375 -18.77593 -18.63458 -17.91810 -17.75506 -17.39506 -17.33636 -17.16394 -16.87581 -16.58167 -16.42975 -16.12894 -15.97191 -15.94226 -15.86865 -15.60199 -15.48015 -15.43921 -15.16015 -14.72015 -14.66912 -14.43586 -14.20724 -13.82901 -13.50887 -13.44571 -13.36145 -13.21050 -13.13599 -13.08549 -12.95208 -12.91648 -12.88382 -12.52612 -12.39897 -12.36195 -12.23130 -12.16924 -11.73664 -11.47213 -11.40640 -11.20214 -11.11948 -10.62208 -10.59505 -10.23473 -10.13648 -9.82915 -5.06332 -0.82175 -0.31887 1.15044 1.16552 1.37904 1.61090 1.74347 1.88834 1.92852 2.22922 2.77988 2.83938 3.10591 3.11641 3.27853 3.41785 3.50256 3.54036 3.58824 3.72554 3.73737 3.77708 3.79376 3.81493 3.92698 4.13644 4.19901 4.30580 4.32277 4.39854 4.50024 4.53796 4.59365 4.61776 4.68132 4.70252 4.72457 4.74558 4.75186 4.81071 4.82850 4.85727 4.86288 4.97993 5.04755 5.08396 5.16850 5.25107 5.25758 5.35156 5.36880 5.52258 5.58258 6.31924 6.37673 6.67342 6.99025 7.32333 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.700 5.700 9 C 0.151 3.849 10 C -0.109 4.109 11 H 0.114 0.886 12 C -0.146 4.146 13 C 0.116 3.884 14 H 0.104 0.896 15 N -0.698 5.698 16 C 0.558 3.442 17 O -0.560 6.560 18 C -0.150 4.150 19 C 0.141 3.859 20 F -0.122 7.122 21 C -0.120 4.120 22 C -0.097 4.097 23 C -0.078 4.078 24 O -0.546 6.546 25 Si 0.779 3.221 26 C 0.098 3.902 27 F -0.130 7.130 28 C -0.078 4.078 29 C -0.122 4.122 30 H 0.061 0.939 31 H 0.086 0.914 32 H 0.064 0.936 33 H 0.069 0.931 34 H 0.098 0.902 35 H 0.068 0.932 36 H 0.064 0.936 37 H 0.086 0.914 38 H 0.062 0.938 39 H 0.416 0.584 40 H 0.070 0.930 41 H 0.069 0.931 42 H 0.070 0.930 43 H 0.092 0.908 44 H 0.415 0.585 45 H 0.181 0.819 46 H 0.113 0.887 47 H 0.399 0.601 48 H -0.280 1.280 49 H -0.290 1.290 50 H 0.179 0.821 51 H 0.107 0.893 52 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.411 -0.708 -0.451 1.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.394 3.606 7 O -0.486 6.486 8 N -0.360 5.360 9 C 0.029 3.971 10 C -0.129 4.129 11 H 0.132 0.868 12 C -0.184 4.184 13 C 0.011 3.989 14 H 0.122 0.878 15 N -0.349 5.349 16 C 0.345 3.655 17 O -0.439 6.439 18 C -0.154 4.154 19 C 0.121 3.879 20 F -0.100 7.100 21 C -0.138 4.138 22 C -0.099 4.099 23 C -0.187 4.187 24 O -0.355 6.355 25 Si 0.683 3.317 26 C 0.079 3.921 27 F -0.109 7.109 28 C -0.097 4.097 29 C -0.161 4.161 30 H 0.080 0.920 31 H 0.105 0.895 32 H 0.083 0.917 33 H 0.088 0.912 34 H 0.117 0.883 35 H 0.087 0.913 36 H 0.083 0.917 37 H 0.105 0.895 38 H 0.081 0.919 39 H 0.253 0.747 40 H 0.089 0.911 41 H 0.087 0.913 42 H 0.089 0.911 43 H 0.110 0.890 44 H 0.254 0.746 45 H 0.198 0.802 46 H 0.131 0.869 47 H 0.250 0.750 48 H -0.207 1.207 49 H -0.217 1.217 50 H 0.197 0.803 51 H 0.125 0.875 52 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.726 -0.211 -0.043 0.758 hybrid contribution -0.469 0.272 -0.578 0.792 sum 0.257 0.061 -0.620 0.674 Atomic orbital electron populations 1.22472 0.94055 1.03704 1.03465 1.22346 0.94451 0.92570 0.81567 1.21894 1.02464 0.90956 1.04208 1.22471 1.01638 1.02261 0.97317 1.86313 1.71578 1.23433 1.47244 1.18382 0.78834 0.80773 0.82582 1.90905 1.42323 1.71018 1.44398 1.44761 1.55227 1.13013 1.23026 1.21389 0.99807 0.78088 0.97819 1.22541 1.01052 0.96877 0.92395 0.86759 1.23616 1.01053 0.96950 0.96810 1.22640 0.90120 0.92278 0.93829 0.87779 1.45791 1.25427 1.57364 1.06350 1.18084 0.85118 0.79043 0.83218 1.90866 1.38284 1.51922 1.62869 1.19875 0.97682 1.05071 0.92785 1.17799 0.86237 0.96201 0.87713 1.91612 1.57683 1.86466 1.74211 1.20997 0.91725 0.99097 1.02020 1.20573 0.97667 0.99182 0.92477 1.25273 0.97001 0.83716 1.12758 1.86556 1.47165 1.19005 1.82739 0.93810 0.86761 0.79139 0.72018 1.17418 0.87042 0.99102 0.88568 1.91566 1.57530 1.86818 1.74969 1.21335 0.90619 0.95626 1.02152 1.23311 1.04337 0.95397 0.93008 0.92025 0.89494 0.91719 0.91182 0.88331 0.91251 0.91728 0.89490 0.91938 0.74723 0.91138 0.91274 0.91111 0.88981 0.74597 0.80179 0.86905 0.75015 1.20682 1.21738 0.80337 0.87497 0.89063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.28 8.85 71.98 0.64 0.92 16 4 C -0.18 -0.53 8.37 71.98 0.60 0.07 16 5 O -0.37 -1.96 9.94 -55.49 -0.55 -2.51 16 6 C 0.64 3.81 8.06 129.79 1.05 4.86 16 7 O -0.60 -6.65 11.88 19.81 0.24 -6.42 16 8 N -0.70 0.73 5.56 -590.84 -3.28 -2.55 16 9 C 0.15 -0.64 5.50 86.38 0.48 -0.17 16 10 C -0.11 0.92 3.75 -10.27 -0.04 0.88 16 11 H 0.11 -1.09 8.14 -2.39 -0.02 -1.11 16 12 C -0.15 0.88 7.45 31.18 0.23 1.11 16 13 C 0.12 -0.56 4.24 45.58 0.19 -0.37 16 14 H 0.10 -0.07 7.46 -2.39 -0.02 -0.09 16 15 N -0.70 3.11 5.31 -442.77 -2.35 0.76 16 16 C 0.56 1.59 7.77 86.74 0.67 2.26 16 17 O -0.56 -6.57 14.94 -3.94 -0.06 -6.63 16 18 C -0.15 0.02 5.88 -20.05 -0.12 -0.10 16 19 C 0.14 0.19 7.28 22.67 0.17 0.35 16 20 F -0.12 -0.83 15.55 44.97 0.70 -0.13 16 21 C -0.12 0.47 8.62 22.27 0.19 0.66 16 22 C -0.10 0.30 5.27 -19.78 -0.10 0.20 16 23 C -0.08 0.25 2.44 71.24 0.17 0.42 16 24 O -0.55 1.28 12.88 -148.98 -1.92 -0.64 16 25 Si 0.78 -3.92 29.90 68.60 2.05 -1.87 16 26 C 0.10 -0.18 7.23 22.33 0.16 -0.02 16 27 F -0.13 -0.20 16.73 44.97 0.75 0.56 16 28 C -0.08 0.37 9.52 22.57 0.21 0.58 16 29 C -0.12 1.16 7.40 31.12 0.23 1.39 16 30 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 31 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 32 H 0.06 0.53 5.88 -2.38 -0.01 0.51 16 33 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 34 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 35 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 36 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 37 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 38 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 39 H 0.42 -2.06 8.58 -92.71 -0.80 -2.86 16 40 H 0.07 -0.20 8.14 -2.38 -0.02 -0.22 16 41 H 0.07 -0.21 7.87 -2.39 -0.02 -0.23 16 42 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 43 H 0.09 -0.57 7.92 -2.39 -0.02 -0.59 16 44 H 0.42 -4.41 6.76 -92.71 -0.63 -5.03 16 45 H 0.18 -1.68 5.10 -2.91 -0.01 -1.70 16 46 H 0.11 -0.16 7.89 -2.39 -0.02 -0.18 16 47 H 0.40 -4.50 8.70 -74.06 -0.64 -5.15 16 48 H -0.28 -0.01 7.11 99.48 0.71 0.70 16 49 H -0.29 -0.71 7.11 99.48 0.71 -0.01 16 50 H 0.18 -2.01 6.40 -2.91 -0.02 -2.03 16 51 H 0.11 -1.27 8.08 -2.39 -0.02 -1.29 16 52 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 Total: 0.00 -26.57 430.11 -0.12 -26.69 By element: Atomic # 1 Polarization: -19.69 SS G_CDS: -1.02 Total: -20.71 kcal Atomic # 6 Polarization: 8.12 SS G_CDS: 5.33 Total: 13.45 kcal Atomic # 7 Polarization: 3.84 SS G_CDS: -5.64 Total: -1.80 kcal Atomic # 8 Polarization: -13.89 SS G_CDS: -2.29 Total: -16.19 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 1.45 Total: 0.42 kcal Atomic # 14 Polarization: -3.92 SS G_CDS: 2.05 Total: -1.87 kcal Total: -26.57 -0.12 -26.69 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_12360598.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.802 kcal (2) G-P(sol) polarization free energy of solvation -26.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.121 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.695 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds