Wall clock time and date at job start Sat Mar 6 2021 19:53:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52997 * 109.47385 * 2 1 4 4 C 1.53002 * 109.46959 * 239.99844 * 2 1 3 5 5 O 1.45202 * 109.47438 * 120.00340 * 2 1 3 6 6 C 1.34644 * 117.00017 * 59.99341 * 5 2 1 7 7 O 1.21506 * 119.99924 * 0.02562 * 6 5 2 8 8 N 1.34776 * 119.99808 * 180.02562 * 6 5 2 9 9 C 1.46498 * 119.99779 * 180.02562 * 8 6 5 10 10 C 1.52999 * 109.46887 * 179.97438 * 9 8 6 11 11 H 1.09000 * 112.91357 * 316.25495 * 10 9 8 12 12 C 1.53788 * 113.61171 * 87.50488 * 10 9 8 13 13 C 1.53787 * 87.08043 * 139.97899 * 12 10 9 14 14 H 1.08998 * 113.68698 * 89.12390 * 13 12 10 15 15 N 1.46496 * 113.61313 * 220.02104 * 13 12 10 16 16 C 1.34781 * 119.99884 * 252.49602 * 15 13 12 17 17 O 1.21571 * 119.99570 * 0.02562 * 16 15 13 18 18 C 1.47719 * 119.99996 * 180.02562 * 16 15 13 19 19 C 1.39634 * 120.11415 * 180.02562 * 18 16 15 20 20 C 1.37854 * 119.87815 * 179.97438 * 19 18 16 21 21 C 1.50698 * 119.94430 * 179.97438 * 20 19 18 22 22 O 1.42905 * 109.47321 * 255.00256 * 21 20 19 23 23 Si 1.86295 * 109.47516 * 135.00146 * 21 20 19 24 24 C 1.38644 * 120.11768 * 0.25639 * 20 19 18 25 25 F 1.35102 * 119.87899 * 179.71831 * 24 20 19 26 26 C 1.38668 * 120.23800 * 359.48691 * 24 20 19 27 27 C 1.37820 * 120.11959 * 0.51335 * 26 24 20 28 28 C 1.53785 * 87.08193 * 334.56672 * 13 12 10 29 29 H 1.09006 * 109.46792 * 299.99628 * 1 2 3 30 30 H 1.08997 * 109.47310 * 59.99603 * 1 2 3 31 31 H 1.09003 * 109.47315 * 180.02562 * 1 2 3 32 32 H 1.09005 * 109.47486 * 180.02562 * 3 2 1 33 33 H 1.08997 * 109.47220 * 300.00452 * 3 2 1 34 34 H 1.08997 * 109.47115 * 60.00438 * 3 2 1 35 35 H 1.08993 * 109.47578 * 300.00418 * 4 2 1 36 36 H 1.09002 * 109.47052 * 60.00409 * 4 2 1 37 37 H 1.08997 * 109.47479 * 179.97438 * 4 2 1 38 38 H 0.96996 * 119.99898 * 359.97438 * 8 6 5 39 39 H 1.09008 * 109.47053 * 60.00213 * 9 8 6 40 40 H 1.08996 * 109.47122 * 300.00362 * 9 8 6 41 41 H 1.09001 * 113.61464 * 25.43115 * 12 10 9 42 42 H 1.08994 * 113.61107 * 254.52719 * 12 10 9 43 43 H 0.97000 * 120.00128 * 72.49851 * 15 13 12 44 44 H 1.07996 * 120.06326 * 359.95477 * 19 18 16 45 45 H 1.09001 * 109.47122 * 15.00355 * 21 20 19 46 46 H 0.96696 * 114.00036 * 299.99741 * 22 21 20 47 47 H 1.48504 * 110.00018 * 58.68178 * 23 21 20 48 48 H 1.48496 * 110.00262 * 180.02562 * 23 21 20 49 49 H 1.07998 * 119.94073 * 180.25425 * 26 24 20 50 50 H 1.07995 * 120.06204 * 179.76928 * 27 26 24 51 51 H 1.08998 * 113.61327 * 139.98172 * 28 13 12 52 52 H 1.08997 * 113.61743 * 270.88421 * 28 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0141 -0.6845 1.1855 6 6 1.6522 -1.9724 1.3383 7 8 0.9515 -2.5097 0.5036 8 7 2.0673 -2.6655 2.4171 9 6 1.6740 -4.0669 2.5830 10 6 2.2741 -4.6149 3.8794 11 1 3.3146 -4.3230 4.0220 12 6 1.3921 -4.3751 5.1161 13 6 1.7825 -5.7910 5.5718 14 1 2.6884 -5.8220 6.1772 15 7 0.6746 -6.5425 6.1667 16 6 0.6479 -6.7647 7.4958 17 8 1.5430 -6.3411 8.2009 18 6 -0.4691 -7.5228 8.0956 19 6 -0.4994 -7.7539 9.4723 20 6 -1.5443 -8.4616 10.0270 21 6 -1.5783 -8.7124 11.5126 22 8 -1.2300 -10.0735 11.7740 23 14 -3.2919 -8.3745 12.1605 24 6 -2.5611 -8.9481 9.2198 25 9 -3.5800 -9.6459 9.7677 26 6 -2.5386 -8.7169 7.8527 27 6 -1.4987 -8.0106 7.2878 28 6 2.0217 -6.1175 4.0881 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0277 0.0005 32 1 3.1301 1.4425 -0.0005 33 1 1.6767 1.9563 -0.8899 34 1 1.6768 1.9563 0.8900 35 1 1.6766 -1.7489 -1.2493 36 1 1.6766 -0.2074 -2.1392 37 1 3.1299 -0.7209 -1.2496 38 1 2.6269 -2.2367 3.0832 39 1 2.0412 -4.6499 1.7383 40 1 0.5872 -4.1365 2.6274 41 1 0.3327 -4.2681 4.8827 42 1 1.7638 -3.5875 5.7714 43 1 -0.0398 -6.8801 5.6040 44 1 0.2944 -7.3793 10.1014 45 1 -0.8658 -8.0533 12.0087 46 1 -1.8227 -10.7172 11.3624 47 1 -4.2770 -9.2446 11.4692 48 1 -3.3384 -8.6176 13.6247 49 1 -3.3353 -9.0945 7.2290 50 1 -1.4802 -7.8342 6.2225 51 1 2.9018 -6.7364 3.9137 52 1 1.1346 -6.4868 3.5737 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_12496548.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:53:18 Heat of formation + Delta-G solvation = -132.279809 kcal Electronic energy + Delta-G solvation = -34224.572832 eV Core-core repulsion = 29299.561050 eV Total energy + Delta-G solvation = -4925.011782 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.183 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -50.47370 -41.84218 -41.53150 -40.35964 -39.29931 -38.25986 -37.80855 -35.94991 -35.05168 -34.37169 -32.82721 -31.89037 -28.99291 -28.36483 -28.29998 -27.02022 -26.67403 -25.50663 -23.74748 -23.50008 -22.67578 -21.53761 -21.33529 -20.50154 -19.23405 -19.09523 -18.83513 -18.05349 -17.89641 -17.68541 -17.31272 -17.21360 -17.07110 -16.41342 -16.25638 -16.06463 -15.92954 -15.67561 -15.58959 -15.42945 -15.14964 -15.03105 -14.76280 -14.63075 -14.41483 -14.03617 -13.88253 -13.50293 -13.42790 -13.38211 -13.32125 -13.13922 -12.99121 -12.93927 -12.90047 -12.86294 -12.49799 -12.37639 -12.36558 -12.18397 -11.70086 -11.42829 -11.38055 -11.36381 -11.17240 -11.09926 -10.85962 -10.21917 -10.16812 -10.09720 -9.80469 -4.98247 -0.51929 0.01865 1.18391 1.19563 1.55850 1.58218 1.76899 1.92766 2.07742 2.55610 2.96609 3.13974 3.22442 3.43693 3.46143 3.55092 3.59665 3.63436 3.74762 3.78683 3.79902 3.84868 3.94795 3.97482 4.11061 4.21202 4.32759 4.44166 4.52783 4.61446 4.62312 4.64683 4.74212 4.76677 4.76827 4.79367 4.83450 4.86183 4.87704 4.88745 4.90112 4.99174 5.02115 5.08686 5.09553 5.11521 5.21287 5.27219 5.29701 5.38319 5.55604 5.60324 5.62199 6.29391 6.40234 6.46589 7.12972 7.34831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.700 5.700 9 C 0.151 3.849 10 C -0.111 4.111 11 H 0.112 0.888 12 C -0.144 4.144 13 C 0.115 3.885 14 H 0.100 0.900 15 N -0.700 5.700 16 C 0.560 3.440 17 O -0.577 6.577 18 C -0.154 4.154 19 C -0.021 4.021 20 C -0.156 4.156 21 C -0.083 4.083 22 O -0.543 6.543 23 Si 0.749 3.251 24 C 0.108 3.892 25 F -0.131 7.131 26 C -0.147 4.147 27 C -0.039 4.039 28 C -0.123 4.123 29 H 0.061 0.939 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.061 0.939 38 H 0.416 0.584 39 H 0.069 0.931 40 H 0.071 0.929 41 H 0.094 0.906 42 H 0.069 0.931 43 H 0.416 0.584 44 H 0.139 0.861 45 H 0.130 0.870 46 H 0.383 0.617 47 H -0.253 1.253 48 H -0.306 1.306 49 H 0.171 0.829 50 H 0.175 0.825 51 H 0.087 0.913 52 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.554 2.404 -4.992 5.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.394 3.606 7 O -0.486 6.486 8 N -0.360 5.360 9 C 0.029 3.971 10 C -0.130 4.130 11 H 0.130 0.870 12 C -0.183 4.183 13 C 0.011 3.989 14 H 0.118 0.882 15 N -0.351 5.351 16 C 0.349 3.651 17 O -0.458 6.458 18 C -0.157 4.157 19 C -0.041 4.041 20 C -0.157 4.157 21 C -0.191 4.191 22 O -0.351 6.351 23 Si 0.653 3.347 24 C 0.089 3.911 25 F -0.110 7.110 26 C -0.166 4.166 27 C -0.058 4.058 28 C -0.161 4.161 29 H 0.080 0.920 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.088 0.912 33 H 0.116 0.884 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.080 0.920 38 H 0.253 0.747 39 H 0.087 0.913 40 H 0.089 0.911 41 H 0.113 0.887 42 H 0.088 0.912 43 H 0.255 0.745 44 H 0.157 0.843 45 H 0.148 0.852 46 H 0.232 0.768 47 H -0.178 1.178 48 H -0.235 1.235 49 H 0.189 0.811 50 H 0.192 0.808 51 H 0.106 0.894 52 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -1.529 2.429 -4.238 5.119 hybrid contribution 0.070 -1.333 0.143 1.343 sum -1.459 1.096 -4.095 4.483 Atomic orbital electron populations 1.22470 0.93990 1.03734 1.03474 1.22339 0.94497 0.92535 0.81555 1.21893 1.02433 0.90999 1.04212 1.22471 1.01606 1.02285 0.97337 1.86313 1.71574 1.23467 1.47239 1.18382 0.78839 0.80761 0.82585 1.90902 1.42355 1.71002 1.44366 1.44774 1.55252 1.13031 1.22990 1.21392 0.99903 0.78015 0.97747 1.22544 1.00911 0.96931 0.92603 0.86994 1.23585 1.00975 0.96945 0.96745 1.22553 0.90420 0.91966 0.93997 0.88181 1.45787 1.26577 1.55984 1.06778 1.18372 0.85084 0.78810 0.82866 1.90797 1.39708 1.53080 1.62170 1.20021 0.97272 1.03885 0.94516 1.21025 0.95630 0.93212 0.94185 1.20146 0.95708 1.02924 0.96925 1.25161 1.14784 0.85930 0.93271 1.86623 1.56496 1.15294 1.76716 0.94632 0.74036 0.89969 0.76112 1.18127 0.85400 0.94641 0.92975 1.91553 1.57557 1.76752 1.85092 1.21407 1.01545 1.01309 0.92324 1.21515 0.90364 0.92557 1.01348 1.23320 1.04271 0.95228 0.93302 0.91981 0.89522 0.91668 0.91238 0.88356 0.91220 0.91689 0.89524 0.92000 0.74741 0.91253 0.91070 0.88718 0.91249 0.74488 0.84270 0.85190 0.76754 1.17801 1.23457 0.81139 0.80780 0.89422 0.87327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 2 C 0.13 0.29 1.13 -10.79 -0.01 0.28 16 3 C -0.14 0.34 8.85 71.98 0.64 0.98 16 4 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 5 O -0.37 -1.74 9.94 -55.53 -0.55 -2.29 16 6 C 0.64 3.38 8.06 129.79 1.05 4.42 16 7 O -0.60 -6.19 11.88 19.82 0.24 -5.96 16 8 N -0.70 1.20 5.56 -590.85 -3.29 -2.08 16 9 C 0.15 -0.76 5.51 86.38 0.48 -0.29 16 10 C -0.11 0.99 3.76 -10.26 -0.04 0.95 16 11 H 0.11 -1.10 8.14 -2.39 -0.02 -1.12 16 12 C -0.14 1.01 7.43 31.12 0.23 1.24 16 13 C 0.12 -0.64 4.24 45.52 0.19 -0.45 16 14 H 0.10 -0.09 7.46 -2.39 -0.02 -0.11 16 15 N -0.70 4.05 5.31 -443.01 -2.35 1.70 16 16 C 0.56 0.82 7.77 86.75 0.67 1.50 16 17 O -0.58 -6.06 15.94 -3.94 -0.06 -6.12 16 18 C -0.15 0.22 5.87 -20.09 -0.12 0.11 16 19 C -0.02 -0.02 9.21 22.52 0.21 0.18 16 20 C -0.16 -0.03 4.77 -19.86 -0.09 -0.13 16 21 C -0.08 -0.10 2.80 71.24 0.20 0.10 16 22 O -0.54 -2.61 12.88 -148.98 -1.92 -4.53 16 23 Si 0.75 0.34 30.82 68.60 2.11 2.45 16 24 C 0.11 -0.14 6.62 22.47 0.15 0.01 16 25 F -0.13 -0.16 12.57 44.97 0.57 0.41 16 26 C -0.15 0.92 10.01 22.27 0.22 1.14 16 27 C -0.04 0.31 9.54 22.52 0.21 0.52 16 28 C -0.12 1.24 7.39 31.12 0.23 1.47 16 29 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 30 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 31 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 32 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 33 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 34 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 36 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 37 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.42 -2.31 8.58 -92.71 -0.80 -3.11 16 39 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 40 H 0.07 -0.29 7.84 -2.39 -0.02 -0.31 16 41 H 0.09 -0.72 7.90 -2.39 -0.02 -0.74 16 42 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 43 H 0.42 -5.20 6.76 -92.71 -0.63 -5.83 16 44 H 0.14 0.39 7.58 -2.91 -0.02 0.37 16 45 H 0.13 -0.07 7.77 -2.39 -0.02 -0.09 16 46 H 0.38 -0.09 8.37 -74.06 -0.62 -0.71 16 47 H -0.25 -0.97 5.28 99.48 0.53 -0.44 16 48 H -0.31 -2.50 7.11 99.48 0.71 -1.79 16 49 H 0.17 -1.87 8.06 -2.91 -0.02 -1.90 16 50 H 0.17 -2.72 6.40 -2.91 -0.02 -2.74 16 51 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 52 H 0.11 -1.40 8.08 -2.39 -0.02 -1.42 16 Total: 0.00 -24.52 423.11 -1.04 -25.56 By element: Atomic # 1 Polarization: -20.29 SS G_CDS: -1.21 Total: -21.50 kcal Atomic # 6 Polarization: 6.94 SS G_CDS: 5.42 Total: 12.36 kcal Atomic # 7 Polarization: 5.25 SS G_CDS: -5.64 Total: -0.39 kcal Atomic # 8 Polarization: -16.60 SS G_CDS: -2.30 Total: -18.90 kcal Atomic # 9 Polarization: -0.16 SS G_CDS: 0.57 Total: 0.41 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: 2.11 Total: 2.45 kcal Total: -24.52 -1.04 -25.56 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_12496548.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.715 kcal (2) G-P(sol) polarization free energy of solvation -24.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.565 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.280 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds