Wall clock time and date at job start Sat Mar 6 2021 19:54:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53004 * 109.46858 * 2 1 4 4 C 1.53004 * 109.47054 * 240.00370 * 2 1 3 5 5 O 1.45206 * 109.47525 * 120.00118 * 2 1 3 6 6 C 1.34633 * 116.99789 * 60.00053 * 5 2 1 7 7 O 1.21509 * 119.99817 * 359.97438 * 6 5 2 8 8 N 1.34775 * 119.99757 * 180.02562 * 6 5 2 9 9 C 1.46497 * 119.99873 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.47333 * 180.02562 * 9 8 6 11 11 H 1.09002 * 112.84450 * 43.80651 * 10 9 8 12 12 C 1.53777 * 113.61743 * 175.00328 * 10 9 8 13 13 C 1.53778 * 87.08116 * 139.98164 * 12 10 9 14 14 H 1.08997 * 113.61515 * 89.20415 * 13 12 10 15 15 N 1.46501 * 113.61106 * 220.01975 * 13 12 10 16 16 C 1.34771 * 119.99960 * 205.00065 * 15 13 12 17 17 O 1.21513 * 120.00334 * 0.02562 * 16 15 13 18 18 C 1.48172 * 120.00223 * 179.97438 * 16 15 13 19 19 N 1.32712 * 119.72209 * 0.02562 * 18 16 15 20 20 C 1.31524 * 121.64652 * 180.02562 * 19 18 16 21 21 C 1.38560 * 120.89865 * 0.02562 * 20 19 18 22 22 C 1.50704 * 120.32502 * 179.97438 * 21 20 19 23 23 O 1.42895 * 109.47263 * 245.00126 * 22 21 20 24 24 Si 1.86302 * 109.46716 * 4.99551 * 22 21 20 25 25 C 1.38628 * 119.35492 * 359.97438 * 21 20 19 26 26 C 1.38587 * 118.48695 * 359.97438 * 25 21 20 27 27 C 1.53775 * 113.61297 * 272.50035 * 10 9 8 28 28 H 1.09002 * 109.47162 * 299.99580 * 1 2 3 29 29 H 1.08999 * 109.47202 * 59.99741 * 1 2 3 30 30 H 1.09002 * 109.46614 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.46768 * 180.02562 * 3 2 1 32 32 H 1.08996 * 109.47068 * 299.99751 * 3 2 1 33 33 H 1.08997 * 109.47337 * 60.00324 * 3 2 1 34 34 H 1.08994 * 109.46644 * 299.99435 * 4 2 1 35 35 H 1.08999 * 109.47207 * 59.99892 * 4 2 1 36 36 H 1.09000 * 109.46598 * 180.02562 * 4 2 1 37 37 H 0.96997 * 120.00447 * 0.02562 * 8 6 5 38 38 H 1.09006 * 109.47276 * 60.00033 * 9 8 6 39 39 H 1.09001 * 109.47325 * 300.00136 * 9 8 6 40 40 H 1.09002 * 113.61375 * 25.42736 * 12 10 9 41 41 H 1.09009 * 113.61141 * 254.53340 * 12 10 9 42 42 H 0.97002 * 119.99945 * 24.99455 * 15 13 12 43 43 H 1.07995 * 119.55324 * 179.71437 * 20 19 18 44 44 H 1.08994 * 109.47265 * 124.99616 * 22 21 20 45 45 H 0.96699 * 114.00173 * 179.97438 * 23 22 21 46 46 H 1.48508 * 109.99852 * 178.68073 * 24 22 21 47 47 H 1.48497 * 110.00265 * 299.99786 * 24 22 21 48 48 H 1.07998 * 120.75303 * 180.02562 * 25 21 20 49 49 H 1.08003 * 120.47095 * 179.97438 * 26 25 21 50 50 H 1.08998 * 113.61906 * 105.46394 * 27 10 9 51 51 H 1.09002 * 113.61908 * 334.56541 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1856 6 6 1.6524 -1.9723 1.3383 7 8 0.9510 -2.5094 0.5040 8 7 2.0674 -2.6654 2.4171 9 6 1.6734 -4.0665 2.5835 10 6 2.2726 -4.6143 3.8804 11 1 2.1777 -3.9211 4.7163 12 6 1.8189 -6.0456 4.2124 13 6 3.2635 -6.3143 4.6658 14 1 3.4405 -6.0877 5.7172 15 7 3.7648 -7.6345 4.2762 16 6 4.7537 -8.2157 4.9839 17 8 5.2291 -7.6448 5.9454 18 6 5.2604 -9.5512 4.5902 19 7 4.7368 -10.1701 3.5394 20 6 5.1573 -11.3561 3.1568 21 6 6.1697 -12.0075 3.8429 22 6 6.6411 -13.3666 3.3936 23 8 6.3379 -14.3332 4.4014 24 14 5.7783 -13.8305 1.8089 25 6 6.7447 -11.3969 4.9466 26 6 6.2823 -10.1468 5.3261 27 6 3.6896 -5.1870 3.7105 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3632 -1.0277 0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6766 1.9564 0.8900 34 1 1.6767 -1.7488 -1.2493 35 1 1.6766 -0.2073 -2.1393 36 1 3.1300 -0.7215 -1.2490 37 1 2.6264 -2.2364 3.0836 38 1 2.0398 -4.6499 1.7388 39 1 0.5865 -4.1355 2.6284 40 1 1.5212 -6.6233 3.3373 41 1 1.0905 -6.0960 5.0219 42 1 3.3850 -8.0905 3.5088 43 1 4.7040 -11.8309 2.2993 44 1 7.7179 -13.3409 3.2270 45 1 6.6135 -15.2330 4.1790 46 1 6.2580 -15.1548 1.3383 47 1 4.3093 -13.8691 2.0228 48 1 7.5355 -11.8841 5.4977 49 1 6.7071 -9.6421 6.1813 50 1 4.4717 -4.5445 4.1147 51 1 3.9035 -5.5301 2.6982 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437770_13287726.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:07 Heat of formation + Delta-G solvation = -83.571944 kcal Electronic energy + Delta-G solvation = -31735.746553 eV Core-core repulsion = 27216.874968 eV Total energy + Delta-G solvation = -4518.871586 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.89900 -41.64878 -40.86359 -39.47852 -38.17338 -38.01488 -35.81593 -34.95869 -34.42121 -33.58124 -32.98620 -29.22980 -28.29071 -28.25051 -27.77711 -26.85514 -25.05525 -24.62546 -23.39388 -22.67248 -21.64534 -21.35834 -20.60452 -19.15990 -18.96096 -18.77768 -18.20618 -17.64443 -17.19147 -17.07320 -16.92510 -16.45679 -16.26233 -16.20730 -15.85830 -15.58155 -15.45351 -15.38366 -15.09018 -14.85512 -14.45338 -14.33886 -14.31283 -14.06527 -14.01945 -13.61873 -13.47610 -13.35699 -13.18345 -12.99669 -12.80213 -12.78696 -12.60474 -12.46679 -12.29933 -12.19386 -12.14018 -11.83656 -11.54295 -11.29993 -11.24592 -11.06807 -10.92221 -10.79089 -10.57655 -10.30164 -10.14867 -10.00003 -5.13294 -0.55315 0.08339 1.05697 1.24990 1.43172 1.62786 1.79332 1.95995 2.03224 2.65477 2.93344 3.12368 3.14425 3.32025 3.49045 3.53136 3.59574 3.67787 3.71506 3.74673 3.81894 3.87058 3.87919 4.01162 4.06961 4.18139 4.21328 4.32856 4.53228 4.54693 4.58679 4.59873 4.65355 4.66459 4.66593 4.78707 4.81674 4.87016 4.89318 4.91722 4.93705 4.96869 4.97536 5.10634 5.14719 5.28135 5.36441 5.40255 5.48966 5.50779 5.65395 6.22234 6.34529 6.46989 6.64421 7.14731 7.48290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.649 3.351 7 O -0.567 6.567 8 N -0.711 5.711 9 C 0.150 3.850 10 C -0.123 4.123 11 H 0.105 0.895 12 C -0.134 4.134 13 C 0.121 3.879 14 H 0.120 0.880 15 N -0.701 5.701 16 C 0.575 3.425 17 O -0.529 6.529 18 C 0.078 3.922 19 N -0.452 5.452 20 C 0.105 3.895 21 C -0.102 4.102 22 C -0.076 4.076 23 O -0.535 6.535 24 Si 0.683 3.317 25 C -0.053 4.053 26 C -0.108 4.108 27 C -0.147 4.147 28 H 0.060 0.940 29 H 0.071 0.929 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.071 0.929 36 H 0.060 0.940 37 H 0.407 0.593 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.094 0.906 41 H 0.083 0.917 42 H 0.413 0.587 43 H 0.165 0.835 44 H 0.084 0.916 45 H 0.384 0.616 46 H -0.255 1.255 47 H -0.250 1.250 48 H 0.146 0.854 49 H 0.153 0.847 50 H 0.077 0.923 51 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.238 -1.000 -2.254 3.330 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.456 6.456 8 N -0.371 5.371 9 C 0.027 3.973 10 C -0.142 4.142 11 H 0.123 0.877 12 C -0.173 4.173 13 C 0.016 3.984 14 H 0.137 0.863 15 N -0.351 5.351 16 C 0.360 3.640 17 O -0.405 6.405 18 C -0.060 4.060 19 N -0.163 5.163 20 C -0.054 4.054 21 C -0.104 4.104 22 C -0.186 4.186 23 O -0.342 6.342 24 Si 0.583 3.417 25 C -0.078 4.078 26 C -0.128 4.128 27 C -0.186 4.186 28 H 0.079 0.921 29 H 0.090 0.910 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.100 0.900 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.090 0.910 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.112 0.888 41 H 0.101 0.899 42 H 0.250 0.750 43 H 0.181 0.819 44 H 0.102 0.898 45 H 0.233 0.767 46 H -0.180 1.180 47 H -0.174 1.174 48 H 0.164 0.836 49 H 0.171 0.829 50 H 0.096 0.904 51 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.765 -0.380 -2.583 2.721 hybrid contribution 1.048 -1.483 1.071 2.109 sum 1.813 -1.863 -1.512 3.008 Atomic orbital electron populations 1.22521 0.93869 1.05042 1.02680 1.22110 0.94431 0.91554 0.81904 1.21877 1.02328 0.92386 1.03310 1.22520 1.01592 1.03449 0.96539 1.86305 1.71514 1.23501 1.46694 1.18109 0.78852 0.80625 0.82206 1.90919 1.40973 1.70518 1.43238 1.44712 1.55865 1.12665 1.23824 1.21339 1.00148 0.78842 0.96960 1.22632 0.96915 0.96856 0.97795 0.87690 1.23337 0.96400 0.95019 1.02494 1.22575 0.93922 0.81478 1.00452 0.86265 1.45808 1.37103 1.19492 1.32708 1.17877 0.79809 0.83879 0.82444 1.90811 1.58242 1.63947 1.27488 1.21172 0.95798 0.95466 0.93526 1.67530 1.26427 1.09274 1.13085 1.22601 0.93114 0.90828 0.98856 1.20528 0.97184 0.95692 0.97042 1.24730 1.04641 0.88030 1.01187 1.86581 1.84675 1.20468 1.42516 0.95052 0.80660 0.86235 0.79738 1.21537 0.98439 0.93456 0.94415 1.22207 0.95495 0.95012 1.00124 1.23605 0.96599 0.97510 1.00855 0.92137 0.90960 0.89428 0.91404 0.89962 0.91403 0.89436 0.90960 0.92134 0.75844 0.90796 0.90775 0.88775 0.89850 0.75027 0.81863 0.89818 0.76705 1.17994 1.17399 0.83592 0.82942 0.90430 0.89120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.11 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 5 O -0.37 -0.98 9.94 -40.31 -0.40 -1.38 16 6 C 0.65 1.94 8.06 54.05 0.44 2.37 16 7 O -0.57 -3.03 11.88 -19.28 -0.23 -3.26 16 8 N -0.71 0.09 5.56 -65.28 -0.36 -0.28 16 9 C 0.15 -0.20 5.51 -4.04 -0.02 -0.22 16 10 C -0.12 0.37 3.75 -89.81 -0.34 0.04 16 11 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 12 C -0.13 0.39 7.39 -25.92 -0.19 0.20 16 13 C 0.12 -0.13 4.24 -67.12 -0.28 -0.42 16 14 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 15 N -0.70 -0.09 5.34 -53.86 -0.29 -0.37 16 16 C 0.58 1.58 7.81 -12.18 -0.10 1.48 16 17 O -0.53 -2.92 15.92 5.35 0.09 -2.84 16 18 C 0.08 0.16 6.75 -83.01 -0.56 -0.40 16 19 N -0.45 -0.60 9.54 -9.80 -0.09 -0.69 16 20 C 0.11 0.01 9.84 -17.56 -0.17 -0.17 16 21 C -0.10 0.01 5.40 -104.36 -0.56 -0.55 16 22 C -0.08 0.14 2.81 36.01 0.10 0.24 16 23 O -0.53 0.26 12.82 -35.23 -0.45 -0.19 16 24 Si 0.68 -1.77 29.88 -169.99 -5.08 -6.85 16 25 C -0.05 0.00 9.83 -39.31 -0.39 -0.39 16 26 C -0.11 -0.13 9.63 -39.05 -0.38 -0.51 16 27 C -0.15 0.29 7.43 -25.92 -0.19 0.10 16 28 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 29 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 37 H 0.41 -0.81 8.58 -40.82 -0.35 -1.16 16 38 H 0.07 -0.05 7.85 -51.93 -0.41 -0.45 16 39 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 40 H 0.09 -0.32 8.08 -51.93 -0.42 -0.74 16 41 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 42 H 0.41 -0.47 8.06 -40.82 -0.33 -0.80 16 43 H 0.16 -0.35 4.88 -52.49 -0.26 -0.60 16 44 H 0.08 -0.31 7.96 -51.93 -0.41 -0.73 16 45 H 0.38 -1.70 8.74 45.56 0.40 -1.30 16 46 H -0.26 0.12 7.11 56.52 0.40 0.53 16 47 H -0.25 -0.10 7.05 56.52 0.40 0.30 16 48 H 0.15 -0.24 8.06 -52.49 -0.42 -0.67 16 49 H 0.15 0.10 7.64 -52.48 -0.40 -0.30 16 50 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 51 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 LS Contribution 416.75 15.07 6.28 6.28 Total: 0.00 -9.35 416.75 -10.20 -19.55 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -7.86 Total: -12.34 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: -1.80 Total: 2.36 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.74 Total: -1.34 kcal Atomic # 8 Polarization: -6.67 SS G_CDS: -1.00 Total: -7.66 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.08 Total: -6.85 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -9.35 -10.20 -19.55 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13287726.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.026 kcal (2) G-P(sol) polarization free energy of solvation -9.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.546 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.572 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds