Wall clock time and date at job start Sat Mar 6 2021 19:54:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34659 * 124.85237 * 2 1 4 4 C 1.36768 * 108.39398 * 180.17894 * 3 2 1 5 5 C 1.47272 * 126.94056 * 179.87208 * 4 3 2 6 6 O 1.21628 * 120.00026 * 179.68493 * 5 4 3 7 7 N 1.34769 * 120.00033 * 359.68635 * 5 4 3 8 8 C 1.46497 * 120.00274 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.90477 * 336.24972 * 8 7 5 10 10 C 1.53779 * 113.61581 * 107.50145 * 8 7 5 11 11 C 1.53779 * 87.08402 * 139.98450 * 10 8 7 12 12 H 1.09000 * 113.61527 * 89.11480 * 11 10 8 13 13 C 1.53000 * 113.61731 * 220.02348 * 11 10 8 14 14 N 1.46508 * 109.46810 * 272.49594 * 13 11 10 15 15 C 1.34777 * 120.00015 * 179.97438 * 14 13 11 16 16 O 1.21514 * 119.99911 * 359.97438 * 15 14 13 17 17 O 1.34630 * 120.00094 * 179.97438 * 15 14 13 18 18 C 1.45200 * 117.00379 * 179.97438 * 17 15 14 19 19 C 1.53001 * 109.46577 * 60.00084 * 18 17 15 20 20 C 1.52997 * 109.47436 * 180.02562 * 18 17 15 21 21 C 1.52999 * 109.47231 * 300.00865 * 18 17 15 22 22 C 1.53784 * 113.61569 * 204.99925 * 8 7 5 23 23 C 1.46686 * 106.11889 * 359.61087 * 4 3 2 24 24 C 1.34489 * 106.33159 * 0.23760 * 23 4 3 25 25 C 1.50694 * 125.57208 * 179.97438 * 24 23 4 26 26 O 1.42905 * 109.46936 * 210.02864 * 25 24 23 27 27 Si 1.86304 * 109.47310 * 330.02246 * 25 24 23 28 28 H 1.09000 * 109.46811 * 270.26415 * 1 2 3 29 29 H 1.09003 * 109.46930 * 30.26224 * 1 2 3 30 30 H 1.08998 * 109.47547 * 150.25940 * 1 2 3 31 31 H 1.07997 * 125.80588 * 0.06999 * 3 2 1 32 32 H 0.97009 * 120.00192 * 359.97438 * 7 5 4 33 33 H 1.09006 * 113.61307 * 25.43652 * 10 8 7 34 34 H 1.08999 * 113.69146 * 254.54138 * 10 8 7 35 35 H 1.09003 * 109.47303 * 32.48927 * 13 11 10 36 36 H 1.08993 * 109.47406 * 152.49206 * 13 11 10 37 37 H 0.96999 * 119.99883 * 359.97438 * 14 13 11 38 38 H 1.09006 * 109.47295 * 60.00227 * 19 18 17 39 39 H 1.09004 * 109.47249 * 179.97438 * 19 18 17 40 40 H 1.08998 * 109.47532 * 300.00022 * 19 18 17 41 41 H 1.08995 * 109.47048 * 60.00176 * 20 18 17 42 42 H 1.09004 * 109.47178 * 180.02562 * 20 18 17 43 43 H 1.09006 * 109.46962 * 300.00095 * 20 18 17 44 44 H 1.08997 * 109.47598 * 59.99068 * 21 18 17 45 45 H 1.08997 * 109.47033 * 179.97438 * 21 18 17 46 46 H 1.08997 * 109.46569 * 299.98980 * 21 18 17 47 47 H 1.09004 * 113.61451 * 105.47149 * 22 8 7 48 48 H 1.08994 * 113.61477 * 334.56451 * 22 8 7 49 49 H 1.08002 * 126.83719 * 180.21999 * 23 4 3 50 50 H 1.08991 * 109.47607 * 90.02452 * 25 24 23 51 51 H 0.96708 * 114.00026 * 180.02562 * 26 25 24 52 52 H 1.48496 * 110.00154 * 178.68267 * 27 25 24 53 53 H 1.48500 * 109.99949 * 300.00648 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7176 -0.0041 5 6 4.7285 1.5957 -0.0081 6 8 5.8447 1.1127 -0.0057 7 7 4.5735 2.9344 -0.0145 8 6 5.7496 3.8079 -0.0180 9 1 6.6379 3.3250 0.3891 10 6 5.9921 4.5091 -1.3650 11 6 6.3675 5.7618 -0.5559 12 1 7.4248 5.8131 -0.2959 13 6 5.8394 7.0638 -1.1618 14 7 6.8058 7.5761 -2.1364 15 6 6.5506 8.7206 -2.8008 16 8 5.5187 9.3273 -2.5917 17 8 7.4389 9.1917 -3.6961 18 6 7.0979 10.4293 -4.3746 19 6 6.9232 11.5452 -3.3425 20 6 8.2186 10.8037 -5.3465 21 6 5.7921 10.2429 -5.1499 22 6 5.4823 5.2032 0.5708 23 6 3.5375 -0.7493 0.0029 24 6 2.2447 -1.1198 0.0051 25 6 1.7397 -2.5396 0.0115 26 8 0.4807 -2.6004 -0.6619 27 14 2.9647 -3.6384 -0.8620 28 1 -0.3633 0.0047 1.0277 29 1 -0.3633 0.8877 -0.5179 30 1 -0.3634 -0.8923 -0.5098 31 1 1.8769 2.1241 0.0011 32 1 3.6832 3.3197 -0.0168 33 1 5.0889 4.6301 -1.9632 34 1 6.8232 4.0910 -1.9330 35 1 4.8881 6.8736 -1.6589 36 1 5.6953 7.8002 -0.3713 37 1 7.6293 7.0916 -2.3035 38 1 7.8534 11.6781 -2.7900 39 1 6.6676 12.4745 -3.8518 40 1 6.1245 11.2783 -2.6504 41 1 8.3427 10.0086 -6.0816 42 1 7.9628 11.7330 -5.8555 43 1 9.1491 10.9365 -4.7943 44 1 4.9935 9.9759 -4.4579 45 1 5.5360 11.1721 -5.6589 46 1 5.9166 9.4479 -5.8852 47 1 5.9023 5.3447 1.5667 48 1 4.4399 5.5139 0.5018 49 1 4.3981 -1.4019 0.0055 50 1 1.6180 -2.8774 1.0406 51 1 0.0951 -3.4866 -0.6958 52 1 2.4936 -5.0464 -0.8348 53 1 3.1396 -3.1883 -2.2663 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_13287730.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:10 Heat of formation + Delta-G solvation = -73.964196 kcal Electronic energy + Delta-G solvation = -32557.887223 eV Core-core repulsion = 28012.120782 eV Total energy + Delta-G solvation = -4545.766441 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.40471 -41.82808 -40.91479 -39.37533 -38.24406 -37.86918 -35.91224 -34.98425 -34.23243 -33.61557 -31.51096 -29.06502 -28.37624 -28.31063 -27.50933 -26.65911 -26.25787 -24.53657 -23.36379 -22.45756 -21.39487 -21.12352 -20.59032 -20.12298 -19.08963 -18.55866 -18.45877 -17.74940 -17.33136 -17.24019 -16.78139 -16.65726 -16.35627 -15.93938 -15.89969 -15.62453 -15.53784 -15.38351 -15.36486 -14.68876 -14.63339 -14.53260 -14.41186 -13.91192 -13.47131 -13.40075 -13.35376 -13.30099 -13.23287 -13.13817 -13.05621 -12.95357 -12.90440 -12.87289 -12.53867 -12.48509 -12.37401 -12.15824 -12.08240 -11.67611 -11.41725 -11.37840 -11.12624 -10.94828 -10.79873 -10.20580 -10.01327 -9.53881 -9.15093 -4.89648 0.75329 1.01799 1.18219 1.48824 1.57355 1.75590 1.88419 2.06960 2.34717 2.56889 3.08532 3.13481 3.48988 3.62538 3.66422 3.73718 3.78740 3.79467 3.87290 3.93411 3.93706 3.97727 4.20320 4.33463 4.39508 4.43941 4.48495 4.49487 4.53027 4.60300 4.63858 4.74175 4.75498 4.79177 4.80499 4.84553 4.86595 4.87262 4.91411 4.99137 5.02631 5.04617 5.10042 5.12099 5.22853 5.26125 5.32711 5.40000 5.59251 5.63425 5.71874 6.01347 6.24419 6.39214 6.51258 6.68718 7.33566 7.38212 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.427 5.427 3 C 0.066 3.934 4 C -0.261 4.261 5 C 0.589 3.411 6 O -0.593 6.593 7 N -0.707 5.707 8 C 0.117 3.883 9 H 0.098 0.902 10 C -0.146 4.146 11 C -0.109 4.109 12 H 0.113 0.887 13 C 0.152 3.848 14 N -0.700 5.700 15 C 0.641 3.359 16 O -0.595 6.595 17 O -0.371 6.371 18 C 0.126 3.874 19 C -0.179 4.179 20 C -0.138 4.138 21 C -0.180 4.180 22 C -0.121 4.121 23 C -0.160 4.160 24 C 0.013 3.987 25 C -0.045 4.045 26 O -0.552 6.552 27 Si 0.765 3.235 28 H 0.083 0.917 29 H 0.099 0.901 30 H 0.108 0.892 31 H 0.207 0.793 32 H 0.412 0.588 33 H 0.089 0.911 34 H 0.066 0.934 35 H 0.068 0.932 36 H 0.071 0.929 37 H 0.416 0.584 38 H 0.061 0.939 39 H 0.087 0.913 40 H 0.064 0.936 41 H 0.068 0.932 42 H 0.098 0.902 43 H 0.069 0.931 44 H 0.064 0.936 45 H 0.087 0.913 46 H 0.060 0.940 47 H 0.088 0.912 48 H 0.106 0.894 49 H 0.156 0.844 50 H 0.103 0.897 51 H 0.400 0.600 52 H -0.270 1.270 53 H -0.312 1.312 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.816 0.191 2.191 4.404 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.101 5.101 3 C -0.071 4.071 4 C -0.271 4.271 5 C 0.380 3.620 6 O -0.474 6.474 7 N -0.357 5.357 8 C 0.012 3.988 9 H 0.116 0.884 10 C -0.185 4.185 11 C -0.128 4.128 12 H 0.131 0.869 13 C 0.030 3.970 14 N -0.360 5.360 15 C 0.395 3.605 16 O -0.487 6.487 17 O -0.286 6.286 18 C 0.090 3.910 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.159 4.159 23 C -0.184 4.184 24 C -0.097 4.097 25 C -0.154 4.154 26 O -0.364 6.364 27 Si 0.669 3.331 28 H 0.102 0.898 29 H 0.118 0.882 30 H 0.126 0.874 31 H 0.224 0.776 32 H 0.249 0.751 33 H 0.108 0.892 34 H 0.085 0.915 35 H 0.087 0.913 36 H 0.089 0.911 37 H 0.253 0.747 38 H 0.081 0.919 39 H 0.105 0.895 40 H 0.083 0.917 41 H 0.087 0.913 42 H 0.117 0.883 43 H 0.088 0.912 44 H 0.083 0.917 45 H 0.105 0.895 46 H 0.079 0.921 47 H 0.107 0.893 48 H 0.124 0.876 49 H 0.174 0.826 50 H 0.121 0.879 51 H 0.252 0.748 52 H -0.196 1.196 53 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges -3.678 0.235 1.537 3.993 hybrid contribution -1.120 -0.389 -0.364 1.240 sum -4.798 -0.154 1.174 4.942 Atomic orbital electron populations 1.22639 0.74764 1.06622 1.04639 1.43730 1.08136 1.04775 1.53453 1.22413 0.89184 0.93179 1.02334 1.20347 0.92298 0.93892 1.20593 1.17651 0.87633 0.82377 0.74359 1.90740 1.27588 1.76194 1.52912 1.45676 1.10309 1.04738 1.75022 1.22474 0.89523 0.89279 0.97489 0.88398 1.23583 1.02400 0.95574 0.96922 1.22540 1.01584 0.91571 0.97110 0.86869 1.21384 0.90911 0.94719 0.89968 1.44784 1.25621 1.22832 1.42813 1.18372 0.81656 0.81906 0.78610 1.90901 1.28167 1.60215 1.69375 1.86310 1.47428 1.42659 1.52186 1.22351 0.96835 0.79917 0.91881 1.22470 1.02924 0.98547 0.99722 1.21892 0.96757 1.03055 0.97798 1.22469 0.97067 1.03617 1.00531 1.23297 1.01603 0.92344 0.98692 1.21753 0.95228 0.93753 1.07690 1.19922 0.90173 0.88132 1.11430 1.24392 0.92559 0.95929 1.02555 1.86386 1.33919 1.36362 1.79686 0.93496 0.85666 0.74650 0.79252 0.89840 0.88237 0.87397 0.77642 0.75061 0.89212 0.91519 0.91320 0.91072 0.74742 0.91949 0.89467 0.91716 0.91278 0.88295 0.91188 0.91729 0.89453 0.92064 0.89303 0.87587 0.82622 0.87920 0.74779 1.19570 1.24008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.28 10.71 127.77 1.37 1.09 16 2 N -0.43 -0.16 3.09 -533.24 -1.65 -1.81 16 3 C 0.07 -0.06 10.83 83.91 0.91 0.85 16 4 C -0.26 -1.48 6.29 -19.04 -0.12 -1.60 16 5 C 0.59 4.76 7.81 86.62 0.68 5.43 16 6 O -0.59 -10.05 16.57 -4.12 -0.07 -10.12 16 7 N -0.71 0.24 5.34 -443.45 -2.37 -2.13 16 8 C 0.12 -0.16 4.24 45.52 0.19 0.04 16 9 H 0.10 0.33 7.47 -2.39 -0.02 0.31 16 10 C -0.15 0.44 7.43 31.12 0.23 0.67 16 11 C -0.11 0.66 3.75 -10.27 -0.04 0.63 16 12 H 0.11 -0.83 8.14 -2.39 -0.02 -0.85 16 13 C 0.15 -0.40 5.51 86.38 0.48 0.07 16 14 N -0.70 -0.22 5.56 -590.85 -3.29 -3.51 16 15 C 0.64 4.45 8.06 129.79 1.05 5.50 16 16 O -0.60 -7.14 11.88 19.80 0.24 -6.91 16 17 O -0.37 -2.27 9.94 -55.39 -0.55 -2.82 16 18 C 0.13 0.44 1.13 -10.79 -0.01 0.42 16 19 C -0.18 -0.62 8.37 71.98 0.60 -0.02 16 20 C -0.14 0.20 8.85 71.98 0.64 0.84 16 21 C -0.18 -0.65 8.37 71.98 0.60 -0.05 16 22 C -0.12 0.84 7.39 31.12 0.23 1.07 16 23 C -0.16 -1.00 9.49 23.62 0.22 -0.78 16 24 C 0.01 0.04 6.17 40.98 0.25 0.29 16 25 C -0.04 0.08 2.97 71.23 0.21 0.30 16 26 O -0.55 1.60 9.68 -148.98 -1.44 0.16 16 27 Si 0.77 -0.43 31.12 68.60 2.13 1.70 16 28 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 29 H 0.10 -0.90 8.13 -2.39 -0.02 -0.92 16 30 H 0.11 -0.38 5.13 -2.39 -0.01 -0.39 16 31 H 0.21 -2.01 7.45 -2.91 -0.02 -2.03 16 32 H 0.41 -2.85 7.67 -92.70 -0.71 -3.56 16 33 H 0.09 -0.28 7.90 -2.38 -0.02 -0.30 16 34 H 0.07 -0.05 8.14 -2.39 -0.02 -0.06 16 35 H 0.07 -0.09 7.84 -2.39 -0.02 -0.11 16 36 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 37 H 0.42 -1.46 8.58 -92.71 -0.80 -2.25 16 38 H 0.06 0.17 8.14 -2.38 -0.02 0.16 16 39 H 0.09 0.00 8.14 -2.38 -0.02 -0.02 16 40 H 0.06 0.56 5.88 -2.39 -0.01 0.54 16 41 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 42 H 0.10 -0.48 8.14 -2.38 -0.02 -0.50 16 43 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 44 H 0.06 0.56 5.88 -2.39 -0.01 0.55 16 45 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 46 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 47 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 48 H 0.11 -1.02 8.08 -2.39 -0.02 -1.03 16 49 H 0.16 0.77 6.89 -2.91 -0.02 0.75 16 50 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 51 H 0.40 -4.26 8.74 -74.05 -0.65 -4.91 16 52 H -0.27 -0.37 7.11 99.48 0.71 0.34 16 53 H -0.31 -2.96 7.11 99.48 0.71 -2.25 16 Total: 0.00 -28.74 426.09 -0.67 -29.41 By element: Atomic # 1 Polarization: -17.56 SS G_CDS: -1.17 Total: -18.73 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: 7.49 Total: 14.75 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -7.30 Total: -7.45 kcal Atomic # 8 Polarization: -17.87 SS G_CDS: -1.83 Total: -19.69 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: 2.13 Total: 1.70 kcal Total: -28.74 -0.67 -29.41 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13287730.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.549 kcal (2) G-P(sol) polarization free energy of solvation -28.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.671 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.415 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds