Wall clock time and date at job start Sat Mar 6 2021 19:54:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53005 * 109.47211 * 2 1 4 4 C 1.52998 * 109.47265 * 240.00122 * 2 1 3 5 5 O 1.45203 * 109.47426 * 120.00199 * 2 1 3 6 6 C 1.34634 * 116.99795 * 59.99496 * 5 2 1 7 7 O 1.21505 * 120.00047 * 0.02562 * 6 5 2 8 8 N 1.34774 * 119.99727 * 180.02562 * 6 5 2 9 9 C 1.46506 * 120.00072 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.47289 * 180.02562 * 9 8 6 11 11 H 1.09000 * 112.84840 * 45.33093 * 10 9 8 12 12 C 1.53782 * 113.61310 * 176.53224 * 10 9 8 13 13 C 1.53782 * 87.08171 * 139.98033 * 12 10 9 14 14 H 1.09002 * 113.61600 * 89.11253 * 13 12 10 15 15 N 1.46497 * 113.61276 * 219.93421 * 13 12 10 16 16 C 1.34779 * 119.99867 * 204.99987 * 15 13 12 17 17 O 1.21548 * 120.00127 * 0.02562 * 16 15 13 18 18 C 1.47842 * 119.99786 * 179.97438 * 16 15 13 19 19 C 1.39521 * 120.56260 * 0.02562 * 18 16 15 20 20 N 1.31691 * 120.56900 * 179.97438 * 19 18 16 21 21 C 1.31924 * 121.88218 * 0.02562 * 20 19 18 22 22 C 1.38355 * 121.07563 * 359.97438 * 21 20 19 23 23 C 1.50701 * 120.34632 * 179.97438 * 22 21 20 24 24 O 1.42905 * 109.46887 * 245.00249 * 23 22 21 25 25 Si 1.86297 * 109.47180 * 4.99973 * 23 22 21 26 26 C 1.38355 * 119.30426 * 359.72588 * 22 21 20 27 27 C 1.53779 * 113.61411 * 274.13435 * 10 9 8 28 28 H 1.09007 * 109.46742 * 300.00157 * 1 2 3 29 29 H 1.08997 * 109.47103 * 59.99591 * 1 2 3 30 30 H 1.08997 * 109.46867 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46946 * 180.02562 * 3 2 1 32 32 H 1.08992 * 109.46950 * 300.00219 * 3 2 1 33 33 H 1.09004 * 109.46892 * 60.00299 * 3 2 1 34 34 H 1.08998 * 109.46828 * 300.00238 * 4 2 1 35 35 H 1.09004 * 109.47152 * 60.00066 * 4 2 1 36 36 H 1.09001 * 109.47549 * 180.02562 * 4 2 1 37 37 H 0.97001 * 120.00676 * 359.97438 * 8 6 5 38 38 H 1.09001 * 109.47060 * 300.00359 * 9 8 6 39 39 H 1.09004 * 109.47073 * 59.99848 * 9 8 6 40 40 H 1.08999 * 113.60951 * 254.52553 * 12 10 9 41 41 H 1.08997 * 113.61603 * 25.42802 * 12 10 9 42 42 H 0.97007 * 120.00033 * 24.99351 * 15 13 12 43 43 H 1.08007 * 119.71577 * 0.02562 * 19 18 16 44 44 H 1.07995 * 119.46513 * 180.02562 * 21 20 19 45 45 H 1.08995 * 109.47294 * 125.00319 * 23 22 21 46 46 H 0.96702 * 113.99983 * 60.00865 * 24 23 22 47 47 H 1.48501 * 109.99908 * 179.97438 * 25 23 22 48 48 H 1.48498 * 110.00270 * 301.32016 * 25 23 22 49 49 H 1.08004 * 120.85605 * 180.29340 * 26 22 21 50 50 H 1.09005 * 113.61706 * 334.57078 * 27 10 9 51 51 H 1.09002 * 113.61447 * 105.46510 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0141 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9516 -2.5096 0.5036 8 7 2.0673 -2.6654 2.4171 9 6 1.6741 -4.0669 2.5831 10 6 2.2731 -4.6145 3.8801 11 1 2.1539 -3.9328 4.7222 12 6 1.8495 -6.0595 4.1922 13 6 3.2955 -6.2996 4.6573 14 1 3.4572 -6.0789 5.7125 15 7 3.8306 -7.6043 4.2605 16 6 4.8256 -8.1694 4.9726 17 8 5.2787 -7.5968 5.9442 18 6 5.3652 -9.4864 4.5724 19 6 4.8535 -10.1543 3.4595 20 7 5.3344 -11.3272 3.1026 21 6 6.3073 -11.9145 3.7726 22 6 6.8683 -11.3174 4.8875 23 6 7.9786 -12.0034 5.6410 24 8 7.5272 -12.3369 6.9552 25 14 8.4721 -13.5579 4.7407 26 6 6.4028 -10.0817 5.3003 27 6 3.7056 -5.1501 3.7190 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6767 1.9563 -0.8899 33 1 1.6767 1.9563 0.8901 34 1 1.6766 -1.7488 -1.2492 35 1 1.6767 -0.2073 -2.1392 36 1 3.1300 -0.7216 -1.2490 37 1 2.6269 -2.2366 3.0833 38 1 0.5872 -4.1365 2.6275 39 1 2.0412 -4.6498 1.7383 40 1 1.1148 -6.1355 4.9938 41 1 1.5740 -6.6344 3.3082 42 1 3.4686 -8.0616 3.4853 43 1 4.0566 -9.7052 2.8852 44 1 6.6723 -12.8767 3.4451 45 1 8.8372 -11.3356 5.7104 46 1 6.7636 -12.9301 6.9700 47 1 9.5669 -14.2434 5.4734 48 1 7.3021 -14.4632 4.6115 49 1 6.8258 -9.5908 6.1643 50 1 3.9386 -5.4759 2.7052 51 1 4.4672 -4.4929 4.1389 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_13287814.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:22 Heat of formation + Delta-G solvation = -87.305229 kcal Electronic energy + Delta-G solvation = -31821.268122 eV Core-core repulsion = 27302.234649 eV Total energy + Delta-G solvation = -4519.033473 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.99992 -41.79970 -40.87596 -39.56694 -38.27455 -38.07928 -35.97507 -35.09107 -34.45324 -33.80219 -32.85652 -29.07789 -28.37362 -28.30900 -27.30454 -26.71190 -26.11048 -24.05010 -23.72596 -22.75419 -21.67750 -21.36403 -20.54198 -19.27609 -19.06740 -18.25984 -17.93790 -17.83335 -17.65149 -17.31832 -17.01126 -16.50895 -16.38522 -16.10801 -16.05826 -15.85194 -15.54746 -15.44138 -15.01942 -14.82090 -14.53035 -14.43870 -14.41374 -14.23795 -13.49225 -13.46120 -13.42527 -13.34369 -13.16302 -13.01912 -12.91184 -12.87299 -12.81541 -12.51574 -12.38978 -12.22608 -12.09434 -11.73345 -11.48712 -11.40414 -11.36209 -11.12113 -11.09864 -10.70791 -10.56929 -10.41113 -10.21361 -10.07287 -4.94829 -0.58651 -0.04087 1.17738 1.21594 1.56696 1.63353 1.75670 1.92114 2.00626 2.61133 3.09357 3.12267 3.32084 3.39847 3.43560 3.58682 3.63789 3.69365 3.71936 3.73852 3.78154 3.79155 3.82247 3.93859 4.09202 4.18577 4.27405 4.41325 4.51462 4.52922 4.60571 4.62897 4.71722 4.75735 4.76404 4.80903 4.82626 4.83723 4.86505 4.86838 4.93193 4.99166 5.05976 5.09141 5.18280 5.26326 5.27006 5.31501 5.36604 5.53897 5.59404 6.36649 6.38850 6.40150 6.64349 7.03331 7.33545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.700 5.700 9 C 0.151 3.849 10 C -0.110 4.110 11 H 0.113 0.887 12 C -0.122 4.122 13 C 0.115 3.885 14 H 0.101 0.899 15 N -0.698 5.698 16 C 0.565 3.435 17 O -0.575 6.575 18 C -0.198 4.198 19 C 0.147 3.853 20 N -0.494 5.494 21 C 0.128 3.872 22 C -0.173 4.173 23 C -0.082 4.082 24 O -0.547 6.547 25 Si 0.774 3.226 26 C -0.002 4.002 27 C -0.144 4.144 28 H 0.061 0.939 29 H 0.086 0.914 30 H 0.064 0.936 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.064 0.936 35 H 0.086 0.914 36 H 0.061 0.939 37 H 0.416 0.584 38 H 0.070 0.930 39 H 0.070 0.930 40 H 0.089 0.911 41 H 0.108 0.892 42 H 0.416 0.584 43 H 0.192 0.808 44 H 0.182 0.818 45 H 0.129 0.871 46 H 0.388 0.612 47 H -0.298 1.298 48 H -0.271 1.271 49 H 0.137 0.863 50 H 0.093 0.907 51 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.675 0.321 -3.391 3.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.394 3.606 7 O -0.486 6.486 8 N -0.360 5.360 9 C 0.029 3.971 10 C -0.129 4.129 11 H 0.131 0.869 12 C -0.161 4.161 13 C 0.010 3.990 14 H 0.119 0.881 15 N -0.350 5.350 16 C 0.352 3.648 17 O -0.455 6.455 18 C -0.203 4.203 19 C -0.011 4.011 20 N -0.202 5.202 21 C -0.028 4.028 22 C -0.176 4.176 23 C -0.191 4.191 24 O -0.355 6.355 25 Si 0.677 3.323 26 C -0.028 4.028 27 C -0.183 4.183 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.083 0.917 31 H 0.088 0.912 32 H 0.117 0.883 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.105 0.895 36 H 0.080 0.920 37 H 0.253 0.747 38 H 0.088 0.912 39 H 0.089 0.911 40 H 0.107 0.893 41 H 0.127 0.873 42 H 0.255 0.745 43 H 0.209 0.791 44 H 0.199 0.801 45 H 0.146 0.854 46 H 0.237 0.763 47 H -0.226 1.226 48 H -0.197 1.197 49 H 0.155 0.845 50 H 0.112 0.888 51 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -0.530 -0.353 -3.703 3.758 hybrid contribution -0.321 0.322 1.762 1.819 sum -0.852 -0.031 -1.942 2.121 Atomic orbital electron populations 1.22472 0.94014 1.03721 1.03491 1.22345 0.94478 0.92551 0.81558 1.21895 1.02429 0.90980 1.04224 1.22471 1.01598 1.02288 0.97330 1.86311 1.71570 1.23453 1.47260 1.18375 0.78820 0.80768 0.82596 1.90904 1.42336 1.71015 1.44352 1.44764 1.55212 1.12980 1.23091 1.21389 1.00013 0.78108 0.97576 1.22534 0.95953 0.97177 0.97224 0.86896 1.23316 0.95065 0.94595 1.03100 1.22618 0.94985 0.81548 0.99827 0.88082 1.45793 1.36200 1.21299 1.31663 1.18231 0.79719 0.84577 0.82250 1.90794 1.60781 1.64941 1.29020 1.21036 1.01500 0.97192 1.00596 1.23461 0.96496 0.89585 0.91560 1.67816 1.11382 1.10372 1.30641 1.23260 0.90274 0.99400 0.89876 1.21349 1.01079 0.96279 0.98847 1.25279 0.96978 1.09646 0.87214 1.86619 1.52907 1.69711 1.26288 0.94032 0.78520 0.73642 0.86067 1.21665 0.91582 0.92903 0.96669 1.23612 0.96835 0.97164 1.00705 0.91977 0.89494 0.91709 0.91237 0.88330 0.91220 0.91692 0.89491 0.91998 0.74748 0.91178 0.91126 0.89257 0.87334 0.74532 0.79113 0.80150 0.85363 0.76291 1.22580 1.19697 0.84534 0.88809 0.91177 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.52 8.37 71.98 0.60 0.09 16 2 C 0.13 0.34 1.13 -10.79 -0.01 0.33 16 3 C -0.14 0.30 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 5 O -0.37 -1.91 9.94 -55.44 -0.55 -2.46 16 6 C 0.64 3.73 8.06 129.79 1.05 4.77 16 7 O -0.59 -6.54 11.88 19.83 0.24 -6.30 16 8 N -0.70 0.79 5.56 -590.85 -3.29 -2.49 16 9 C 0.15 -0.66 5.50 86.38 0.47 -0.18 16 10 C -0.11 0.91 3.75 -10.27 -0.04 0.87 16 11 H 0.11 -1.05 8.14 -2.39 -0.02 -1.07 16 12 C -0.12 1.14 7.40 31.12 0.23 1.37 16 13 C 0.11 -0.53 4.24 45.58 0.19 -0.34 16 14 H 0.10 -0.02 7.46 -2.39 -0.02 -0.04 16 15 N -0.70 3.04 5.32 -442.64 -2.35 0.68 16 16 C 0.57 1.73 7.78 86.79 0.68 2.40 16 17 O -0.58 -6.82 16.02 -3.87 -0.06 -6.89 16 18 C -0.20 -0.16 5.89 -19.99 -0.12 -0.28 16 19 C 0.15 -0.43 10.71 85.02 0.91 0.48 16 20 N -0.49 0.11 10.35 -194.76 -2.01 -1.91 16 21 C 0.13 -0.27 9.84 84.71 0.83 0.56 16 22 C -0.17 0.20 5.35 -19.81 -0.11 0.09 16 23 C -0.08 0.19 2.82 71.24 0.20 0.39 16 24 O -0.55 -0.84 12.84 -148.98 -1.91 -2.76 16 25 Si 0.77 -3.70 29.91 68.60 2.05 -1.65 16 26 C 0.00 0.00 9.38 22.73 0.21 0.21 16 27 C -0.14 0.88 7.45 31.18 0.23 1.11 16 28 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 29 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 30 H 0.06 0.52 5.88 -2.39 -0.01 0.50 16 31 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 33 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 34 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 35 H 0.09 -0.05 8.14 -2.38 -0.02 -0.07 16 36 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.42 -2.08 8.58 -92.71 -0.80 -2.88 16 38 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.07 -0.23 7.88 -2.38 -0.02 -0.25 16 40 H 0.09 -0.85 8.14 -2.39 -0.02 -0.86 16 41 H 0.11 -1.30 8.08 -2.39 -0.02 -1.31 16 42 H 0.42 -4.43 6.79 -92.70 -0.63 -5.06 16 43 H 0.19 -2.00 6.42 -2.91 -0.02 -2.02 16 44 H 0.18 -1.21 4.84 -2.91 -0.01 -1.23 16 45 H 0.13 -0.45 7.96 -2.39 -0.02 -0.47 16 46 H 0.39 -1.73 8.70 -74.06 -0.64 -2.37 16 47 H -0.30 -0.98 7.11 99.48 0.71 -0.27 16 48 H -0.27 0.57 7.01 99.48 0.70 1.27 16 49 H 0.14 0.70 7.74 -2.91 -0.02 0.67 16 50 H 0.09 -0.61 7.92 -2.38 -0.02 -0.63 16 51 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 Total: 0.00 -25.36 414.51 -2.37 -27.73 By element: Atomic # 1 Polarization: -15.79 SS G_CDS: -1.06 Total: -16.84 kcal Atomic # 6 Polarization: 6.32 SS G_CDS: 6.58 Total: 12.89 kcal Atomic # 7 Polarization: 3.94 SS G_CDS: -7.65 Total: -3.72 kcal Atomic # 8 Polarization: -16.12 SS G_CDS: -2.29 Total: -18.41 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.05 Total: -1.65 kcal Total: -25.36 -2.37 -27.73 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13287814.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.577 kcal (2) G-P(sol) polarization free energy of solvation -25.358 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds