Wall clock time and date at job start Sat Mar 6 2021 19:54:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.36414 * 125.79954 * 2 1 4 4 C 1.47378 * 127.19307 * 0.02562 * 3 2 1 5 5 O 1.21606 * 120.00243 * 359.97438 * 4 3 2 6 6 N 1.34777 * 119.99816 * 179.97438 * 4 3 2 7 7 C 1.46502 * 119.99843 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.90816 * 23.74366 * 7 6 4 9 9 C 1.53784 * 113.61491 * 154.99806 * 7 6 4 10 10 C 1.53787 * 87.07923 * 139.97939 * 9 7 6 11 11 H 1.08998 * 113.61103 * 89.12089 * 10 9 7 12 12 C 1.53003 * 113.61385 * 220.01697 * 10 9 7 13 13 N 1.46498 * 109.47015 * 185.00396 * 12 10 9 14 14 C 1.34775 * 120.00104 * 180.02562 * 13 12 10 15 15 O 1.21512 * 119.99734 * 359.97438 * 14 13 12 16 16 O 1.34632 * 120.00366 * 179.97438 * 14 13 12 17 17 C 1.45196 * 117.00375 * 179.97438 * 16 14 13 18 18 C 1.52999 * 109.46956 * 60.00058 * 17 16 14 19 19 C 1.52997 * 109.47580 * 180.02562 * 17 16 14 20 20 C 1.53001 * 109.47163 * 300.00437 * 17 16 14 21 21 C 1.53778 * 87.08035 * 334.56830 * 10 9 7 22 22 C 1.47025 * 105.61503 * 180.26226 * 3 2 1 23 23 C 1.34187 * 105.95313 * 359.57202 * 22 3 2 24 24 C 1.50694 * 125.43570 * 180.14352 * 23 22 3 25 25 O 1.42891 * 109.47347 * 300.36211 * 24 23 22 26 26 Si 1.86302 * 109.46677 * 180.36354 * 24 23 22 27 27 O 1.33650 * 125.80282 * 180.02562 * 2 1 3 28 28 H 1.09000 * 109.47410 * 89.99702 * 1 2 3 29 29 H 1.09005 * 109.46872 * 209.99870 * 1 2 3 30 30 H 1.09000 * 109.47340 * 329.99733 * 1 2 3 31 31 H 0.97002 * 120.00010 * 359.97438 * 6 4 3 32 32 H 1.09004 * 113.61451 * 25.43425 * 9 7 6 33 33 H 1.08994 * 113.61477 * 254.52726 * 9 7 6 34 34 H 1.08996 * 109.47095 * 305.00324 * 12 10 9 35 35 H 1.09005 * 109.46621 * 65.00138 * 12 10 9 36 36 H 0.97004 * 120.00129 * 359.97438 * 13 12 10 37 37 H 1.08997 * 109.47135 * 59.99768 * 18 17 16 38 38 H 1.09001 * 109.47677 * 180.02562 * 18 17 16 39 39 H 1.09001 * 109.47412 * 300.00129 * 18 17 16 40 40 H 1.09004 * 109.47114 * 60.00065 * 19 17 16 41 41 H 1.08996 * 109.47312 * 180.02562 * 19 17 16 42 42 H 1.09000 * 109.47017 * 300.00120 * 19 17 16 43 43 H 1.09001 * 109.47161 * 59.99898 * 20 17 16 44 44 H 1.09002 * 109.47548 * 179.97438 * 20 17 16 45 45 H 1.08994 * 109.47064 * 299.99503 * 20 17 16 46 46 H 1.08999 * 113.61111 * 139.98327 * 21 10 9 47 47 H 1.08999 * 113.61280 * 270.79710 * 21 10 9 48 48 H 1.08003 * 127.02219 * 179.73819 * 22 3 2 49 49 H 1.08997 * 109.47389 * 60.36799 * 24 23 22 50 50 H 0.96701 * 114.00314 * 300.00115 * 25 24 23 51 51 H 1.48500 * 109.99972 * 58.68171 * 26 24 23 52 52 H 1.48504 * 109.99640 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3049 1.1064 0.0000 4 6 1.8738 2.5157 0.0005 5 8 0.6889 2.7892 0.0006 6 7 2.7929 3.5015 0.0010 7 6 2.3644 4.9025 0.0009 8 1 1.3613 5.0394 0.4048 9 6 3.4052 5.8650 0.5970 10 6 3.0282 6.8438 -0.5277 11 1 2.2066 7.5115 -0.2682 12 6 4.2279 7.5807 -1.1266 13 7 3.7575 8.5700 -2.0993 14 6 4.6443 9.3423 -2.7577 15 8 5.8341 9.2183 -2.5442 16 8 4.2120 10.2511 -3.6521 17 6 5.2232 11.0482 -4.3232 18 6 6.1680 10.1269 -5.0973 19 6 4.5467 12.0180 -5.2941 20 6 6.0203 11.8402 -3.2848 21 6 2.5900 5.6156 -1.3427 22 6 3.6848 0.5991 -0.0065 23 6 3.5859 -0.7391 -0.0001 24 6 4.7459 -1.7010 -0.0001 25 8 5.5428 -1.4861 -1.1665 26 14 4.1026 -3.4494 -0.0009 27 8 2.2888 -1.0839 -0.0005 28 1 -0.3634 0.0001 -1.0276 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3634 0.8899 0.5139 31 1 3.7381 3.2834 0.0013 32 1 4.4290 5.4969 0.5304 33 1 3.1474 6.2244 1.5931 34 1 4.7779 8.0853 -0.3323 35 1 4.8826 6.8649 -1.6238 36 1 2.8077 8.6687 -2.2701 37 1 5.6002 9.5626 -5.8370 38 1 6.9274 10.7252 -5.6008 39 1 6.6500 9.4363 -4.4052 40 1 3.8738 12.6743 -4.7423 41 1 5.3058 12.6160 -5.7982 42 1 3.9785 11.4541 -6.0339 43 1 6.5023 11.1496 -2.5928 44 1 6.7797 12.4383 -3.7885 45 1 5.3473 12.4965 -2.7333 46 1 1.6743 5.7737 -1.9123 47 1 3.3906 5.1802 -1.9406 48 1 4.5927 1.1841 -0.0122 49 1 5.3533 -1.5378 0.8901 50 1 5.0659 -1.6143 -1.9979 51 1 3.2468 -3.6752 -1.1933 52 1 5.2370 -4.4079 -0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437770_13308374.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:28 Heat of formation + Delta-G solvation = -112.037260 kcal Electronic energy + Delta-G solvation = -32863.439869 eV Core-core repulsion = 28218.303794 eV Total energy + Delta-G solvation = -4645.136075 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.75305 -41.72002 -41.10447 -39.53891 -38.24097 -38.15428 -35.82999 -34.95678 -34.42569 -33.80884 -33.06715 -29.63845 -28.93125 -28.30936 -28.27010 -26.89482 -26.08142 -24.79031 -23.61138 -22.82275 -21.88033 -21.46787 -20.92585 -20.24652 -19.06458 -18.96528 -17.98900 -17.71820 -17.71341 -17.22835 -17.14227 -16.81547 -16.47281 -16.07956 -16.00187 -15.84668 -15.70678 -15.38974 -15.33110 -14.75953 -14.65945 -14.35681 -14.25560 -14.15338 -13.96099 -13.89183 -13.66064 -13.48011 -13.37485 -13.21099 -13.02233 -12.98171 -12.86195 -12.82195 -12.80572 -12.47257 -12.32139 -12.20997 -12.11617 -11.86739 -11.56799 -11.26847 -11.07315 -10.94647 -10.88228 -10.74296 -10.18465 -10.06358 -9.57044 -5.02976 0.28953 0.80921 1.09409 1.22363 1.40744 1.66413 1.87864 1.93302 2.17211 2.32781 3.05574 3.09480 3.28106 3.32184 3.46239 3.57988 3.65524 3.75362 3.76120 3.79929 3.85094 3.99214 4.04183 4.11553 4.24917 4.29405 4.40261 4.50026 4.53262 4.53880 4.57922 4.60477 4.61525 4.64694 4.66907 4.75700 4.79798 4.80993 4.86133 4.88562 4.91126 4.94936 5.07081 5.09874 5.14175 5.20230 5.25962 5.38217 5.47282 5.49672 5.63023 5.88564 6.17031 6.44089 6.48234 7.22034 7.45584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.096 3.904 3 C -0.255 4.255 4 C 0.595 3.405 5 O -0.539 6.539 6 N -0.714 5.714 7 C 0.125 3.875 8 H 0.120 0.880 9 C -0.134 4.134 10 C -0.123 4.123 11 H 0.105 0.895 12 C 0.150 3.850 13 N -0.711 5.711 14 C 0.649 3.351 15 O -0.567 6.567 16 O -0.365 6.365 17 C 0.137 3.863 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.184 4.184 21 C -0.148 4.148 22 C -0.149 4.149 23 C -0.054 4.054 24 C -0.034 4.034 25 O -0.521 6.521 26 Si 0.702 3.298 27 O -0.168 6.168 28 H 0.091 0.909 29 H 0.083 0.917 30 H 0.111 0.889 31 H 0.402 0.598 32 H 0.092 0.908 33 H 0.083 0.917 34 H 0.074 0.926 35 H 0.073 0.927 36 H 0.407 0.593 37 H 0.059 0.941 38 H 0.072 0.928 39 H 0.087 0.913 40 H 0.067 0.933 41 H 0.082 0.918 42 H 0.067 0.933 43 H 0.087 0.913 44 H 0.072 0.928 45 H 0.060 0.940 46 H 0.076 0.924 47 H 0.088 0.912 48 H 0.158 0.842 49 H 0.138 0.862 50 H 0.381 0.619 51 H -0.256 1.256 52 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.077 -0.576 1.486 1.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.259 4.259 4 C 0.383 3.617 5 O -0.418 6.418 6 N -0.364 5.364 7 C 0.020 3.980 8 H 0.137 0.863 9 C -0.173 4.173 10 C -0.142 4.142 11 H 0.123 0.877 12 C 0.027 3.973 13 N -0.371 5.371 14 C 0.402 3.598 15 O -0.457 6.457 16 O -0.280 6.280 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.241 4.241 21 C -0.187 4.187 22 C -0.168 4.168 23 C -0.103 4.103 24 C -0.144 4.144 25 O -0.327 6.327 26 Si 0.601 3.399 27 O -0.065 6.065 28 H 0.110 0.890 29 H 0.101 0.899 30 H 0.129 0.871 31 H 0.237 0.763 32 H 0.110 0.890 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.242 0.758 37 H 0.079 0.921 38 H 0.091 0.909 39 H 0.105 0.895 40 H 0.086 0.914 41 H 0.101 0.899 42 H 0.086 0.914 43 H 0.106 0.894 44 H 0.091 0.909 45 H 0.079 0.921 46 H 0.095 0.905 47 H 0.107 0.893 48 H 0.176 0.824 49 H 0.155 0.845 50 H 0.229 0.771 51 H -0.180 1.180 52 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges -0.946 -1.327 1.554 2.251 hybrid contribution 0.475 0.746 -1.227 1.513 sum -0.471 -0.581 0.326 0.816 Atomic orbital electron populations 1.20705 0.83320 1.05529 1.04732 1.22929 0.94083 0.82857 0.95870 1.21132 0.93236 0.93838 1.17715 1.17198 0.85453 0.83754 0.75260 1.90771 1.16547 1.84016 1.50488 1.45749 1.09663 1.05586 1.75449 1.22496 0.99913 0.78745 0.96830 0.86257 1.23338 0.99891 0.95333 0.98754 1.22634 0.98338 0.95776 0.97449 0.87680 1.21332 0.95787 0.89623 0.90521 1.44711 1.09676 1.39000 1.43694 1.18110 0.84527 0.78738 0.78413 1.90920 1.14951 1.71518 1.68265 1.86303 1.41293 1.47995 1.52407 1.22111 0.86551 0.89647 0.91692 1.22519 0.99725 1.00830 1.01031 1.21877 1.01588 0.98171 0.98263 1.22521 1.00694 1.00969 0.99922 1.23610 1.02609 0.95317 0.97159 1.22578 0.96448 0.93511 1.04258 1.22558 0.82927 0.95563 1.09204 1.24338 0.90287 1.07661 0.92095 1.86662 1.38687 1.91715 1.15668 0.94373 0.81853 0.73705 0.89982 1.83677 1.16361 1.35051 1.71388 0.89048 0.89856 0.87050 0.76324 0.88981 0.89850 0.90771 0.90909 0.75834 0.92144 0.90945 0.89454 0.91386 0.89944 0.91411 0.89447 0.90947 0.92116 0.90496 0.89329 0.82444 0.84487 0.77074 1.18050 1.17253 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 36.00 0.36 0.39 16 2 C 0.10 0.13 7.37 -34.97 -0.26 -0.13 16 3 C -0.25 -0.39 6.31 -103.28 -0.65 -1.04 16 4 C 0.59 1.29 7.81 -12.54 -0.10 1.19 16 5 O -0.54 -2.63 14.44 5.27 0.08 -2.55 16 6 N -0.71 0.48 5.35 -54.10 -0.29 0.20 16 7 C 0.13 -0.18 4.24 -67.12 -0.28 -0.47 16 8 H 0.12 -0.01 7.46 -51.93 -0.39 -0.39 16 9 C -0.13 0.45 7.39 -25.91 -0.19 0.25 16 10 C -0.12 0.39 3.75 -89.80 -0.34 0.05 16 11 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 12 C 0.15 -0.21 5.51 -4.04 -0.02 -0.23 16 13 N -0.71 0.10 5.56 -65.28 -0.36 -0.26 16 14 C 0.65 1.94 8.06 54.05 0.44 2.37 16 15 O -0.57 -3.03 11.88 -19.28 -0.23 -3.26 16 16 O -0.37 -0.98 9.94 -40.30 -0.40 -1.38 16 17 C 0.14 0.22 1.13 -90.62 -0.10 0.11 16 18 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 19 C -0.14 0.07 8.85 37.16 0.33 0.40 16 20 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 21 C -0.15 0.31 7.43 -25.92 -0.19 0.12 16 22 C -0.15 -0.01 10.46 -37.45 -0.39 -0.40 16 23 C -0.05 0.00 6.20 -35.74 -0.22 -0.23 16 24 C -0.03 0.04 2.98 36.00 0.11 0.15 16 25 O -0.52 0.12 12.86 -35.23 -0.45 -0.33 16 26 Si 0.70 -0.96 32.08 -169.99 -5.45 -6.41 16 27 O -0.17 -0.15 8.89 7.66 0.07 -0.09 16 28 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 30 H 0.11 0.08 6.48 -51.93 -0.34 -0.26 16 31 H 0.40 -1.06 7.90 -40.82 -0.32 -1.38 16 32 H 0.09 -0.36 8.08 -51.93 -0.42 -0.78 16 33 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.07 -0.05 7.84 -51.93 -0.41 -0.46 16 36 H 0.41 -0.82 8.58 -40.82 -0.35 -1.17 16 37 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 38 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 44 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 45 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 46 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 47 H 0.09 -0.16 7.89 -51.93 -0.41 -0.57 16 48 H 0.16 -0.30 7.74 -52.48 -0.41 -0.71 16 49 H 0.14 -0.39 7.96 -51.93 -0.41 -0.80 16 50 H 0.38 -1.06 8.70 45.56 0.40 -0.66 16 51 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 52 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 LS Contribution 425.60 15.07 6.41 6.41 Total: 0.00 -8.84 425.60 -9.89 -18.73 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -8.36 Total: -13.66 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -0.90 Total: 2.60 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.65 Total: -0.07 kcal Atomic # 8 Polarization: -6.67 SS G_CDS: -0.94 Total: -7.61 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.45 Total: -6.41 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -8.84 -9.89 -18.73 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13308374.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.303 kcal (2) G-P(sol) polarization free energy of solvation -8.840 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.894 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds