Wall clock time and date at job start Sat Mar 6 2021 19:54:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53001 * 109.46705 * 2 1 4 4 C 1.53006 * 109.47278 * 240.00412 * 2 1 3 5 5 O 1.45202 * 109.47373 * 120.00237 * 2 1 3 6 6 C 1.34638 * 116.99756 * 60.00373 * 5 2 1 7 7 O 1.21506 * 120.00025 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99881 * 180.02562 * 6 5 2 9 9 C 1.46497 * 120.00242 * 179.97438 * 8 6 5 10 10 C 1.52990 * 109.47171 * 179.97438 * 9 8 6 11 11 H 1.09000 * 112.90908 * 43.75361 * 10 9 8 12 12 C 1.53786 * 113.61464 * 174.99989 * 10 9 8 13 13 C 1.53781 * 87.17350 * 140.02626 * 12 10 9 14 14 H 1.09003 * 113.61462 * 89.16045 * 13 12 10 15 15 N 1.46493 * 113.61552 * 219.97837 * 13 12 10 16 16 C 1.34781 * 120.00279 * 205.00255 * 15 13 12 17 17 O 1.21584 * 119.99687 * 359.97438 * 16 15 13 18 18 C 1.47527 * 120.00092 * 180.02562 * 16 15 13 19 19 C 1.40143 * 120.19282 * 179.72167 * 18 16 15 20 20 O 1.35651 * 120.14802 * 359.97438 * 19 18 16 21 21 C 1.38707 * 119.70146 * 179.74837 * 19 18 16 22 22 C 1.38052 * 120.08202 * 0.52695 * 21 19 18 23 23 C 1.50702 * 119.80395 * 179.72185 * 22 21 19 24 24 O 1.42898 * 109.47095 * 65.02441 * 23 22 21 25 25 Si 1.86304 * 109.47211 * 185.02091 * 23 22 21 26 26 C 1.38546 * 120.39551 * 359.74532 * 22 21 19 27 27 C 1.37791 * 120.29445 * 359.97438 * 26 22 21 28 28 C 1.53781 * 87.08070 * 334.52830 * 13 12 10 29 29 H 1.08997 * 109.47385 * 299.99203 * 1 2 3 30 30 H 1.09001 * 109.47580 * 59.99896 * 1 2 3 31 31 H 1.09001 * 109.46808 * 179.97438 * 1 2 3 32 32 H 1.09009 * 109.46882 * 179.97438 * 3 2 1 33 33 H 1.08995 * 109.47264 * 299.99641 * 3 2 1 34 34 H 1.09000 * 109.47118 * 60.00763 * 3 2 1 35 35 H 1.09001 * 109.46675 * 299.99846 * 4 2 1 36 36 H 1.09001 * 109.47067 * 59.99378 * 4 2 1 37 37 H 1.08996 * 109.46939 * 179.97438 * 4 2 1 38 38 H 0.97003 * 119.99582 * 359.97438 * 8 6 5 39 39 H 1.09007 * 109.46596 * 59.99839 * 9 8 6 40 40 H 1.08994 * 109.47005 * 300.00149 * 9 8 6 41 41 H 1.09002 * 113.61357 * 25.43543 * 12 10 9 42 42 H 1.09002 * 113.61608 * 254.61705 * 12 10 9 43 43 H 0.97006 * 120.00380 * 24.99977 * 15 13 12 44 44 H 0.96701 * 113.99973 * 90.00010 * 20 19 18 45 45 H 1.07997 * 119.95966 * 180.24921 * 21 19 18 46 46 H 1.08998 * 109.47537 * 305.02504 * 23 22 21 47 47 H 0.96698 * 114.00520 * 59.99999 * 24 23 22 48 48 H 1.48496 * 109.99682 * 58.68346 * 25 23 22 49 49 H 1.48500 * 109.99811 * 179.97438 * 25 23 22 50 50 H 1.07995 * 119.85471 * 179.97438 * 26 22 21 51 51 H 1.08004 * 120.04350 * 180.02562 * 27 26 22 52 52 H 1.09005 * 113.61471 * 139.98321 * 28 13 12 53 53 H 1.09003 * 113.61469 * 270.88099 * 28 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6524 -1.9724 1.3382 7 8 0.9511 -2.5095 0.5039 8 7 2.0674 -2.6656 2.4170 9 6 1.6734 -4.0667 2.5834 10 6 2.2736 -4.6147 3.8796 11 1 2.1808 -3.9222 4.7162 12 6 1.8200 -6.0461 4.2116 13 6 3.2641 -6.3171 4.6654 14 1 3.4412 -6.0905 5.7168 15 7 3.7634 -7.6382 4.2763 16 6 4.7512 -8.2208 4.9845 17 8 5.2281 -7.6496 5.9460 18 6 5.2543 -9.5510 4.5923 19 6 6.2853 -10.1579 5.3223 20 8 6.8259 -9.5246 6.3932 21 6 6.7470 -11.4111 4.9477 22 6 6.2000 -12.0516 3.8539 23 6 6.7108 -13.4103 3.4487 24 8 6.4126 -14.3572 4.4766 25 14 5.8870 -13.9357 1.8624 26 6 5.1846 -11.4525 3.1262 27 6 4.7099 -10.2105 3.4876 28 6 3.6923 -5.1907 3.7100 29 1 -0.3634 0.5137 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4426 0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6766 1.9563 0.8901 35 1 1.6767 -1.7488 -1.2493 36 1 1.6766 -0.2073 -2.1393 37 1 3.1300 -0.7208 -1.2495 38 1 2.6270 -2.2366 3.0832 39 1 2.0399 -4.6500 1.7386 40 1 0.5866 -4.1356 2.6283 41 1 1.5216 -6.6236 3.3366 42 1 1.0913 -6.0966 5.0207 43 1 3.3831 -8.0938 3.5090 44 1 6.3850 -9.7222 7.2308 45 1 7.5385 -11.8844 5.5097 46 1 7.7895 -13.3634 3.2998 47 1 5.4684 -14.4513 4.6629 48 1 6.1632 -12.9424 0.7936 49 1 6.3827 -15.2739 1.4518 50 1 4.7633 -11.9613 2.2718 51 1 3.9179 -9.7475 2.9177 52 1 4.4754 -4.5493 4.1143 53 1 3.9058 -5.5344 2.6978 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_13422076.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:35 Heat of formation + Delta-G solvation = -140.389675 kcal Electronic energy + Delta-G solvation = -34180.197892 eV Core-core repulsion = 29405.606224 eV Total energy + Delta-G solvation = -4774.591668 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.87171 -41.68862 -40.63422 -39.39055 -38.46304 -38.19122 -37.13840 -35.92899 -35.02033 -34.33424 -32.56776 -31.10644 -29.09762 -28.37628 -28.31322 -27.44588 -26.68142 -24.55671 -23.89620 -23.33922 -22.60346 -21.56156 -21.38268 -20.57888 -19.38916 -19.12772 -18.61995 -18.19604 -17.80139 -17.41468 -17.30958 -16.83686 -16.57693 -16.31656 -16.19252 -15.98701 -15.88273 -15.70658 -15.47319 -15.41667 -15.21608 -14.80065 -14.66461 -14.46249 -14.38360 -13.84197 -13.47090 -13.42179 -13.35525 -13.22464 -13.15037 -13.02242 -12.92085 -12.88991 -12.87288 -12.50737 -12.38562 -12.30602 -12.23404 -12.14607 -11.73874 -11.65830 -11.43819 -11.39116 -11.12663 -10.90079 -10.48518 -10.23004 -10.17739 -9.97864 -9.76865 -4.99280 -0.41571 0.14571 1.17898 1.28175 1.64687 1.72302 1.75383 2.00047 2.10087 2.57687 3.11386 3.12804 3.42639 3.46314 3.54884 3.59944 3.69487 3.73492 3.76712 3.78344 3.79042 3.86054 3.93528 4.08488 4.21340 4.27595 4.36696 4.42228 4.51531 4.60155 4.60310 4.63330 4.73003 4.75411 4.75559 4.77656 4.82074 4.85051 4.86395 4.87434 4.99502 5.02923 5.08008 5.09880 5.13669 5.20754 5.24367 5.26061 5.29227 5.37301 5.57367 5.59137 5.61149 6.38411 6.50010 6.70818 6.75071 7.18458 7.33144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.372 6.372 6 C 0.641 3.359 7 O -0.594 6.594 8 N -0.701 5.701 9 C 0.152 3.848 10 C -0.110 4.110 11 H 0.112 0.888 12 C -0.120 4.120 13 C 0.117 3.883 14 H 0.099 0.901 15 N -0.702 5.702 16 C 0.556 3.444 17 O -0.566 6.566 18 C -0.181 4.181 19 C 0.152 3.848 20 O -0.499 6.499 21 C -0.142 4.142 22 C -0.074 4.074 23 C -0.085 4.085 24 O -0.554 6.554 25 Si 0.791 3.209 26 C -0.130 4.130 27 C -0.052 4.052 28 C -0.147 4.147 29 H 0.061 0.939 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.068 0.932 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.060 0.940 38 H 0.416 0.584 39 H 0.070 0.930 40 H 0.072 0.928 41 H 0.109 0.891 42 H 0.090 0.910 43 H 0.415 0.585 44 H 0.407 0.593 45 H 0.132 0.868 46 H 0.106 0.894 47 H 0.397 0.603 48 H -0.279 1.279 49 H -0.303 1.303 50 H 0.166 0.834 51 H 0.171 0.829 52 H 0.064 0.936 53 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.160 -1.188 -2.001 6.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.394 3.606 7 O -0.486 6.486 8 N -0.361 5.361 9 C 0.030 3.970 10 C -0.129 4.129 11 H 0.130 0.870 12 C -0.158 4.158 13 C 0.012 3.988 14 H 0.117 0.883 15 N -0.354 5.354 16 C 0.344 3.656 17 O -0.445 6.445 18 C -0.185 4.185 19 C 0.105 3.895 20 O -0.312 6.312 21 C -0.161 4.161 22 C -0.075 4.075 23 C -0.194 4.194 24 O -0.362 6.362 25 Si 0.696 3.304 26 C -0.147 4.147 27 C -0.071 4.071 28 C -0.186 4.186 29 H 0.080 0.920 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.087 0.913 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.079 0.921 38 H 0.252 0.748 39 H 0.088 0.912 40 H 0.090 0.910 41 H 0.127 0.873 42 H 0.108 0.892 43 H 0.254 0.746 44 H 0.267 0.733 45 H 0.150 0.850 46 H 0.123 0.877 47 H 0.248 0.752 48 H -0.206 1.206 49 H -0.232 1.232 50 H 0.183 0.817 51 H 0.188 0.812 52 H 0.083 0.917 53 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -5.055 -1.013 -2.982 5.956 hybrid contribution 0.803 0.113 0.860 1.182 sum -4.252 -0.900 -2.123 4.837 Atomic orbital electron populations 1.22468 0.93935 1.03754 1.03498 1.22350 0.94538 0.92536 0.81548 1.21894 1.02390 0.91007 1.04236 1.22470 1.01546 1.02308 0.97347 1.86313 1.71597 1.23464 1.47261 1.18374 0.78826 0.80762 0.82593 1.90900 1.42292 1.71016 1.44351 1.44788 1.55203 1.13035 1.23088 1.21388 1.00048 0.78055 0.97535 1.22582 0.95851 0.97302 0.97150 0.86967 1.23298 0.95017 0.94400 1.03090 1.22510 0.95368 0.81362 0.99569 0.88309 1.45787 1.37127 1.19838 1.32689 1.18339 0.79619 0.85231 0.82414 1.90805 1.58761 1.65594 1.29368 1.20490 1.00192 0.96448 1.01331 1.18769 0.90810 0.90038 0.89854 1.84716 1.58263 1.70401 1.17861 1.21342 1.02020 0.93385 0.99337 1.20569 0.95665 0.96769 0.94475 1.25418 1.04823 0.86457 1.02691 1.86503 1.32234 1.60056 1.57457 0.93705 0.88477 0.76055 0.72131 1.21241 0.96886 0.95911 1.00670 1.21520 0.98211 0.93982 0.93360 1.23644 0.96940 0.97418 1.00591 0.91966 0.89483 0.91662 0.91309 0.88303 0.91211 0.91660 0.89472 0.92087 0.74795 0.91201 0.90984 0.87269 0.89162 0.74635 0.73278 0.85034 0.87661 0.75220 1.20602 1.23174 0.81748 0.81198 0.91684 0.89024 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.27 8.85 71.98 0.64 0.90 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 5 O -0.37 -2.01 9.94 -55.47 -0.55 -2.57 16 6 C 0.64 3.86 8.06 129.79 1.05 4.91 16 7 O -0.59 -6.54 11.88 19.82 0.24 -6.30 16 8 N -0.70 0.53 5.56 -590.88 -3.29 -2.75 16 9 C 0.15 -0.63 5.52 86.38 0.48 -0.15 16 10 C -0.11 0.86 3.76 -10.18 -0.04 0.82 16 11 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 12 C -0.12 1.12 7.39 31.12 0.23 1.35 16 13 C 0.12 -0.46 4.24 45.52 0.19 -0.27 16 14 H 0.10 0.07 7.46 -2.39 -0.02 0.05 16 15 N -0.70 2.62 5.30 -443.22 -2.35 0.27 16 16 C 0.56 2.35 7.76 86.69 0.67 3.02 16 17 O -0.57 -7.39 14.76 16.94 0.25 -7.14 16 18 C -0.18 -0.26 5.89 -20.01 -0.12 -0.38 16 19 C 0.15 0.71 6.72 22.84 0.15 0.87 16 20 O -0.50 -3.91 11.58 -68.75 -0.80 -4.71 16 21 C -0.14 -0.29 9.60 22.34 0.21 -0.08 16 22 C -0.07 0.18 5.35 -19.83 -0.11 0.07 16 23 C -0.08 0.25 2.79 71.24 0.20 0.45 16 24 O -0.55 1.05 12.83 -148.98 -1.91 -0.86 16 25 Si 0.79 -4.57 29.78 68.60 2.04 -2.52 16 26 C -0.13 0.86 8.64 22.24 0.19 1.05 16 27 C -0.05 0.32 9.53 22.52 0.21 0.54 16 28 C -0.15 0.72 7.44 31.21 0.23 0.95 16 29 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 32 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 33 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 34 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 35 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 36 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.42 -1.85 8.58 -92.71 -0.80 -2.64 16 39 H 0.07 -0.21 7.85 -2.38 -0.02 -0.23 16 40 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.11 -1.34 8.08 -2.39 -0.02 -1.36 16 42 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 43 H 0.41 -4.37 6.76 -92.70 -0.63 -5.00 16 44 H 0.41 0.27 9.06 -74.06 -0.67 -0.40 16 45 H 0.13 0.36 8.06 -2.91 -0.02 0.34 16 46 H 0.11 -0.08 7.96 -2.39 -0.02 -0.10 16 47 H 0.40 -4.24 8.70 -74.06 -0.64 -4.89 16 48 H -0.28 0.46 7.11 99.48 0.71 1.17 16 49 H -0.30 -0.86 7.11 99.48 0.71 -0.15 16 50 H 0.17 -2.08 4.88 -2.91 -0.01 -2.10 16 51 H 0.17 -2.40 6.40 -2.91 -0.02 -2.41 16 52 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 53 H 0.09 -0.47 7.90 -2.39 -0.02 -0.49 16 Total: 0.00 -29.59 428.29 -2.69 -32.28 By element: Atomic # 1 Polarization: -18.53 SS G_CDS: -1.72 Total: -20.24 kcal Atomic # 6 Polarization: 9.15 SS G_CDS: 5.39 Total: 14.54 kcal Atomic # 7 Polarization: 3.16 SS G_CDS: -5.64 Total: -2.48 kcal Atomic # 8 Polarization: -18.80 SS G_CDS: -2.77 Total: -21.58 kcal Atomic # 14 Polarization: -4.57 SS G_CDS: 2.04 Total: -2.52 kcal Total: -29.59 -2.69 -32.28 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13422076.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.108 kcal (2) G-P(sol) polarization free energy of solvation -29.592 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.282 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds