Wall clock time and date at job start Sat Mar 6 2021 19:54:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47212 * 2 1 4 4 C 1.52995 * 109.47168 * 239.99695 * 2 1 3 5 5 O 1.45206 * 109.46694 * 119.99915 * 2 1 3 6 6 C 1.34636 * 117.00136 * 59.99990 * 5 2 1 7 7 O 1.21509 * 119.99990 * 0.02562 * 6 5 2 8 8 N 1.34779 * 119.99877 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99872 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.46840 * 180.02562 * 9 8 6 11 11 H 1.09000 * 112.85142 * 314.66202 * 10 9 8 12 12 C 1.53778 * 113.61854 * 85.86223 * 10 9 8 13 13 C 1.53950 * 87.02008 * 139.94859 * 12 10 9 14 14 H 1.08998 * 113.53938 * 89.19387 * 13 12 10 15 15 N 1.46502 * 113.66844 * 220.06759 * 13 12 10 16 16 C 1.34783 * 120.00132 * 252.56494 * 15 13 12 17 17 O 1.21612 * 119.99610 * 359.97438 * 16 15 13 18 18 C 1.47378 * 119.99878 * 179.97438 * 16 15 13 19 19 C 1.36415 * 127.19063 * 0.02562 * 18 16 15 20 20 O 1.33661 * 108.39164 * 179.97438 * 19 18 16 21 21 C 1.34216 * 110.90939 * 359.97438 * 20 19 18 22 22 C 1.50701 * 125.43616 * 179.97438 * 21 20 19 23 23 O 1.42897 * 109.46625 * 119.97635 * 22 21 20 24 24 Si 1.86297 * 109.47147 * 359.97438 * 22 21 20 25 25 C 1.34179 * 109.12426 * 359.74744 * 21 20 19 26 26 C 1.53777 * 87.11423 * 334.63767 * 13 12 10 27 27 H 1.08994 * 109.47245 * 300.00365 * 1 2 3 28 28 H 1.09006 * 109.47200 * 60.00393 * 1 2 3 29 29 H 1.09003 * 109.47113 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47015 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.46468 * 299.99903 * 3 2 1 32 32 H 1.08995 * 109.46581 * 59.99548 * 3 2 1 33 33 H 1.09003 * 109.47357 * 300.00161 * 4 2 1 34 34 H 1.08993 * 109.47323 * 60.00149 * 4 2 1 35 35 H 1.08999 * 109.46974 * 180.02562 * 4 2 1 36 36 H 0.97000 * 119.99708 * 359.97438 * 8 6 5 37 37 H 1.09002 * 109.47391 * 59.99686 * 9 8 6 38 38 H 1.09001 * 109.46813 * 299.99742 * 9 8 6 39 39 H 1.09003 * 113.61363 * 254.53223 * 12 10 9 40 40 H 1.09005 * 113.61131 * 25.42909 * 12 10 9 41 41 H 0.97001 * 119.99966 * 72.56009 * 15 13 12 42 42 H 1.07994 * 125.80609 * 359.96660 * 19 18 16 43 43 H 1.08997 * 109.47242 * 239.97571 * 22 21 20 44 44 H 0.96707 * 113.99901 * 179.97438 * 23 22 21 45 45 H 1.48505 * 110.00224 * 298.68102 * 24 22 21 46 46 H 1.48505 * 110.00225 * 59.99898 * 24 22 21 47 47 H 1.07993 * 127.02373 * 180.25767 * 25 21 20 48 48 H 1.09001 * 113.61353 * 270.81253 * 26 13 12 49 49 H 1.08998 * 113.69291 * 139.91770 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5037 8 7 2.0670 -2.6654 2.4174 9 6 1.6738 -4.0668 2.5833 10 6 2.2727 -4.6143 3.8804 11 1 3.3209 -4.3447 4.0095 12 6 1.4085 -4.3392 5.1223 13 6 1.7696 -5.7609 5.5895 14 1 2.6800 -5.8046 6.1873 15 7 0.6503 -6.4808 6.2020 16 6 0.6303 -6.6881 7.5337 17 8 1.5416 -6.2780 8.2266 18 6 -0.4960 -7.4119 8.1498 19 6 -1.5867 -7.9323 7.5171 20 8 -2.3709 -8.5084 8.4335 21 6 -1.8398 -8.3909 9.6605 22 6 -2.4511 -8.9215 10.9316 23 8 -1.5562 -9.8575 11.5358 24 14 -4.0634 -9.7682 10.5391 25 6 -0.6753 -7.7300 9.5740 26 6 1.9885 -6.1085 4.1076 27 1 -0.3633 0.5139 0.8899 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9562 -0.8900 32 1 1.6766 1.9563 0.8899 33 1 1.6766 -1.7490 -1.2492 34 1 1.6767 -0.2076 -2.1391 35 1 3.1300 -0.7217 -1.2489 36 1 2.6266 -2.2364 3.0835 37 1 2.0410 -4.6497 1.7387 38 1 0.5869 -4.1364 2.6277 39 1 1.8053 -3.5533 5.7650 40 1 0.3498 -4.2092 4.8974 41 1 -0.0764 -6.8082 5.6492 42 1 -1.7833 -7.8865 6.4562 43 1 -2.6325 -8.0959 11.6198 44 1 -1.8854 -10.2402 12.3607 45 1 -5.0140 -8.7977 9.9392 46 1 -3.8298 -10.8960 9.6015 47 1 -0.0074 -7.4804 10.3851 48 1 1.0887 -6.4631 3.6048 49 1 2.8525 -6.7490 3.9309 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437770_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:58 Heat of formation + Delta-G solvation = -103.764679 kcal Electronic energy + Delta-G solvation = -30480.793796 eV Core-core repulsion = 25991.554066 eV Total energy + Delta-G solvation = -4489.239730 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -43.76134 -41.73846 -41.13985 -39.53523 -38.17684 -37.99530 -35.84616 -34.97870 -34.42303 -33.72915 -31.92398 -29.11419 -28.31983 -28.28254 -26.93194 -26.74574 -25.48697 -23.64342 -22.66196 -22.21646 -21.45042 -21.05084 -20.38082 -19.04635 -18.98294 -18.71693 -17.75316 -17.43942 -17.25524 -17.18240 -17.12069 -16.54161 -16.11893 -15.92700 -15.87429 -15.76064 -15.42915 -15.36084 -14.80476 -14.67524 -14.36857 -14.19889 -14.13452 -13.74662 -13.69918 -13.54149 -13.39165 -13.24358 -13.04288 -12.83587 -12.81758 -12.74881 -12.48823 -12.33599 -12.22708 -12.11554 -11.90055 -11.60276 -11.28232 -11.04629 -10.95507 -10.90166 -10.59679 -10.21199 -10.12066 -9.80118 -5.15054 0.18047 0.84892 1.09310 1.20667 1.50350 1.62908 1.91551 1.95290 2.02248 2.30332 3.07098 3.17971 3.25854 3.43684 3.49035 3.53577 3.56807 3.64216 3.78737 3.82450 3.83975 3.98038 4.00997 4.14923 4.25098 4.36000 4.47382 4.49928 4.56794 4.57137 4.58702 4.63549 4.63622 4.73557 4.77255 4.78758 4.83582 4.86010 4.89563 4.93707 5.06125 5.10042 5.20263 5.23202 5.36894 5.42631 5.46152 5.61588 5.80804 6.38558 6.42103 6.42358 7.16137 7.43850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.649 3.351 7 O -0.568 6.568 8 N -0.711 5.711 9 C 0.150 3.850 10 C -0.123 4.123 11 H 0.105 0.895 12 C -0.148 4.148 13 C 0.125 3.875 14 H 0.120 0.880 15 N -0.718 5.718 16 C 0.591 3.409 17 O -0.529 6.529 18 C -0.237 4.237 19 C 0.031 3.969 20 O -0.173 6.173 21 C -0.017 4.017 22 C -0.036 4.036 23 O -0.543 6.543 24 Si 0.712 3.288 25 C -0.117 4.117 26 C -0.134 4.134 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.077 0.923 40 H 0.089 0.911 41 H 0.399 0.601 42 H 0.214 0.786 43 H 0.096 0.904 44 H 0.392 0.608 45 H -0.252 1.252 46 H -0.250 1.250 47 H 0.164 0.836 48 H 0.092 0.908 49 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.876 -0.693 1.526 3.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.457 6.457 8 N -0.371 5.371 9 C 0.028 3.972 10 C -0.142 4.142 11 H 0.124 0.876 12 C -0.187 4.187 13 C 0.020 3.980 14 H 0.138 0.862 15 N -0.369 5.369 16 C 0.379 3.621 17 O -0.406 6.406 18 C -0.241 4.241 19 C -0.040 4.040 20 O -0.070 6.070 21 C -0.064 4.064 22 C -0.146 4.146 23 O -0.350 6.350 24 Si 0.611 3.389 25 C -0.136 4.136 26 C -0.173 4.173 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.105 0.895 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.105 0.895 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.096 0.904 40 H 0.107 0.893 41 H 0.233 0.767 42 H 0.231 0.769 43 H 0.113 0.887 44 H 0.241 0.759 45 H -0.177 1.177 46 H -0.174 1.174 47 H 0.182 0.818 48 H 0.110 0.890 49 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -3.050 -0.816 0.379 3.180 hybrid contribution 0.509 0.583 -0.278 0.822 sum -2.541 -0.233 0.101 2.554 Atomic orbital electron populations 1.22520 0.93879 1.05005 1.02699 1.22115 0.94426 0.91576 0.81883 1.21878 1.02346 0.92354 1.03330 1.22519 1.01614 1.03432 0.96544 1.86307 1.71496 1.23470 1.46711 1.18109 0.78843 0.80646 0.82165 1.90918 1.41035 1.70507 1.43225 1.44704 1.55922 1.12679 1.23787 1.21323 0.99901 0.78870 0.97148 1.22633 1.00925 0.96716 0.93934 0.87644 1.23640 1.00687 0.97769 0.96594 1.22548 0.90932 0.91550 0.92968 0.86209 1.45804 1.25016 1.58874 1.07242 1.17263 0.84775 0.78306 0.81806 1.90815 1.37199 1.50673 1.61914 1.21538 0.98329 1.09287 0.94964 1.24473 0.89503 0.95583 0.94399 1.83700 1.45827 1.61788 1.15682 1.21173 0.96086 1.04806 0.84362 1.23797 1.03121 0.97342 0.90299 1.86463 1.45621 1.59765 1.43193 0.95116 0.75372 0.81521 0.86875 1.22500 0.96331 0.99521 0.95278 1.23332 1.03323 0.95645 0.94985 0.92135 0.90938 0.89470 0.91381 0.89932 0.91400 0.89453 0.90936 0.92111 0.75809 0.90764 0.90928 0.90388 0.89287 0.76670 0.76938 0.88674 0.75924 1.17673 1.17406 0.81802 0.88975 0.89784 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.11 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.28 8.37 37.16 0.31 0.04 16 5 O -0.37 -0.97 9.94 -40.31 -0.40 -1.37 16 6 C 0.65 1.89 8.06 54.06 0.44 2.32 16 7 O -0.57 -2.96 11.88 -19.28 -0.23 -3.19 16 8 N -0.71 0.15 5.56 -65.28 -0.36 -0.21 16 9 C 0.15 -0.23 5.50 -4.04 -0.02 -0.26 16 10 C -0.12 0.40 3.75 -89.81 -0.34 0.06 16 11 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 12 C -0.15 0.33 7.45 -25.83 -0.19 0.13 16 13 C 0.12 -0.17 4.24 -67.03 -0.28 -0.45 16 14 H 0.12 0.05 7.46 -51.93 -0.39 -0.34 16 15 N -0.72 0.63 5.35 -54.02 -0.29 0.34 16 16 C 0.59 1.76 7.81 -12.54 -0.10 1.66 16 17 O -0.53 -3.71 16.58 5.27 0.09 -3.63 16 18 C -0.24 -0.55 6.31 -103.28 -0.65 -1.21 16 19 C 0.03 0.00 11.61 30.08 0.35 0.35 16 20 O -0.17 -0.38 8.89 7.63 0.07 -0.32 16 21 C -0.02 -0.04 6.24 -35.74 -0.22 -0.26 16 22 C -0.04 0.02 2.97 36.01 0.11 0.13 16 23 O -0.54 0.24 12.84 -35.23 -0.45 -0.21 16 24 Si 0.71 -1.11 32.09 -169.99 -5.45 -6.57 16 25 C -0.12 -0.39 10.87 -37.45 -0.41 -0.80 16 26 C -0.13 0.46 7.40 -25.92 -0.19 0.27 16 27 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.41 -0.82 8.58 -40.82 -0.35 -1.17 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.07 -0.07 7.87 -51.93 -0.41 -0.48 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.09 -0.19 7.92 -51.93 -0.41 -0.60 16 41 H 0.40 -1.55 7.70 -40.82 -0.31 -1.87 16 42 H 0.21 -1.06 7.47 -52.49 -0.39 -1.46 16 43 H 0.10 -0.27 7.96 -51.93 -0.41 -0.69 16 44 H 0.39 -2.35 8.74 45.56 0.40 -1.95 16 45 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 46 H -0.25 -0.56 7.11 56.52 0.40 -0.15 16 47 H 0.16 0.53 8.06 -52.49 -0.42 0.11 16 48 H 0.09 -0.40 8.08 -51.93 -0.42 -0.82 16 49 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 407.43 15.07 6.14 6.14 Total: 0.00 -12.22 407.43 -9.14 -21.36 By element: Atomic # 1 Polarization: -7.30 SS G_CDS: -7.58 Total: -14.88 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: -0.67 Total: 2.52 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.65 Total: 0.14 kcal Atomic # 8 Polarization: -7.79 SS G_CDS: -0.93 Total: -8.71 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.45 Total: -6.57 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -12.22 -9.14 -21.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.405 kcal (2) G-P(sol) polarization free energy of solvation -12.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.625 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.140 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.359 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds