Wall clock time and date at job start Sat Mar 6 2021 19:54:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47212 * 2 1 4 4 C 1.52995 * 109.47168 * 239.99695 * 2 1 3 5 5 O 1.45206 * 109.46694 * 119.99915 * 2 1 3 6 6 C 1.34636 * 117.00136 * 59.99990 * 5 2 1 7 7 O 1.21509 * 119.99990 * 0.02562 * 6 5 2 8 8 N 1.34779 * 119.99877 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99872 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.46840 * 180.02562 * 9 8 6 11 11 H 1.09000 * 112.85142 * 314.66202 * 10 9 8 12 12 C 1.53778 * 113.61854 * 85.86223 * 10 9 8 13 13 C 1.53950 * 87.02008 * 139.94859 * 12 10 9 14 14 H 1.08998 * 113.53938 * 89.19387 * 13 12 10 15 15 N 1.46502 * 113.66844 * 220.06759 * 13 12 10 16 16 C 1.34783 * 120.00132 * 252.56494 * 15 13 12 17 17 O 1.21612 * 119.99610 * 359.97438 * 16 15 13 18 18 C 1.47378 * 119.99878 * 179.97438 * 16 15 13 19 19 C 1.36415 * 127.19063 * 0.02562 * 18 16 15 20 20 O 1.33661 * 108.39164 * 179.97438 * 19 18 16 21 21 C 1.34216 * 110.90939 * 359.97438 * 20 19 18 22 22 C 1.50701 * 125.43616 * 179.97438 * 21 20 19 23 23 O 1.42897 * 109.46625 * 119.97635 * 22 21 20 24 24 Si 1.86297 * 109.47147 * 359.97438 * 22 21 20 25 25 C 1.34179 * 109.12426 * 359.74744 * 21 20 19 26 26 C 1.53777 * 87.11423 * 334.63767 * 13 12 10 27 27 H 1.08994 * 109.47245 * 300.00365 * 1 2 3 28 28 H 1.09006 * 109.47200 * 60.00393 * 1 2 3 29 29 H 1.09003 * 109.47113 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47015 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.46468 * 299.99903 * 3 2 1 32 32 H 1.08995 * 109.46581 * 59.99548 * 3 2 1 33 33 H 1.09003 * 109.47357 * 300.00161 * 4 2 1 34 34 H 1.08993 * 109.47323 * 60.00149 * 4 2 1 35 35 H 1.08999 * 109.46974 * 180.02562 * 4 2 1 36 36 H 0.97000 * 119.99708 * 359.97438 * 8 6 5 37 37 H 1.09002 * 109.47391 * 59.99686 * 9 8 6 38 38 H 1.09001 * 109.46813 * 299.99742 * 9 8 6 39 39 H 1.09003 * 113.61363 * 254.53223 * 12 10 9 40 40 H 1.09005 * 113.61131 * 25.42909 * 12 10 9 41 41 H 0.97001 * 119.99966 * 72.56009 * 15 13 12 42 42 H 1.07994 * 125.80609 * 359.96660 * 19 18 16 43 43 H 1.08997 * 109.47242 * 239.97571 * 22 21 20 44 44 H 0.96707 * 113.99901 * 179.97438 * 23 22 21 45 45 H 1.48505 * 110.00224 * 298.68102 * 24 22 21 46 46 H 1.48505 * 110.00225 * 59.99898 * 24 22 21 47 47 H 1.07993 * 127.02373 * 180.25767 * 25 21 20 48 48 H 1.09001 * 113.61353 * 270.81253 * 26 13 12 49 49 H 1.08998 * 113.69291 * 139.91770 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5037 8 7 2.0670 -2.6654 2.4174 9 6 1.6738 -4.0668 2.5833 10 6 2.2727 -4.6143 3.8804 11 1 3.3209 -4.3447 4.0095 12 6 1.4085 -4.3392 5.1223 13 6 1.7696 -5.7609 5.5895 14 1 2.6800 -5.8046 6.1873 15 7 0.6503 -6.4808 6.2020 16 6 0.6303 -6.6881 7.5337 17 8 1.5416 -6.2780 8.2266 18 6 -0.4960 -7.4119 8.1498 19 6 -1.5867 -7.9323 7.5171 20 8 -2.3709 -8.5084 8.4335 21 6 -1.8398 -8.3909 9.6605 22 6 -2.4511 -8.9215 10.9316 23 8 -1.5562 -9.8575 11.5358 24 14 -4.0634 -9.7682 10.5391 25 6 -0.6753 -7.7300 9.5740 26 6 1.9885 -6.1085 4.1076 27 1 -0.3633 0.5139 0.8899 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9562 -0.8900 32 1 1.6766 1.9563 0.8899 33 1 1.6766 -1.7490 -1.2492 34 1 1.6767 -0.2076 -2.1391 35 1 3.1300 -0.7217 -1.2489 36 1 2.6266 -2.2364 3.0835 37 1 2.0410 -4.6497 1.7387 38 1 0.5869 -4.1364 2.6277 39 1 1.8053 -3.5533 5.7650 40 1 0.3498 -4.2092 4.8974 41 1 -0.0764 -6.8082 5.6492 42 1 -1.7833 -7.8865 6.4562 43 1 -2.6325 -8.0959 11.6198 44 1 -1.8854 -10.2402 12.3607 45 1 -5.0140 -8.7977 9.9392 46 1 -3.8298 -10.8960 9.6015 47 1 -0.0074 -7.4804 10.3851 48 1 1.0887 -6.4631 3.6048 49 1 2.8525 -6.7490 3.9309 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:54:57 Heat of formation + Delta-G solvation = -108.947387 kcal Electronic energy + Delta-G solvation = -30481.018535 eV Core-core repulsion = 25991.554066 eV Total energy + Delta-G solvation = -4489.464469 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.86854 -41.86289 -41.17289 -39.62577 -38.29143 -37.91350 -35.98338 -35.09387 -34.54092 -33.81787 -31.96172 -29.09259 -28.39348 -28.32735 -26.76909 -26.72037 -25.55722 -23.70941 -22.67959 -22.34450 -21.45392 -21.15284 -20.36342 -19.13791 -18.98613 -18.65837 -17.81838 -17.56254 -17.35471 -17.29233 -17.18075 -16.49870 -16.13491 -15.98165 -15.90121 -15.79108 -15.51027 -15.44338 -14.87706 -14.70972 -14.45232 -14.30943 -14.22073 -13.80909 -13.51538 -13.46608 -13.36536 -13.20087 -13.04762 -12.93293 -12.89191 -12.73370 -12.53056 -12.41032 -12.23832 -12.17878 -11.76601 -11.49676 -11.41699 -11.26351 -11.13728 -11.08543 -10.53291 -10.25183 -10.15801 -9.85320 -5.04515 0.11401 0.69848 1.15222 1.17895 1.50386 1.68709 1.73023 1.99859 2.00837 2.13842 3.09483 3.27557 3.38912 3.41552 3.55881 3.67280 3.71353 3.72000 3.76643 3.77530 3.84414 3.91961 4.12677 4.24846 4.33466 4.39999 4.42169 4.49388 4.58652 4.60226 4.69580 4.72155 4.73834 4.76046 4.79445 4.81012 4.84960 4.85147 4.95706 5.02729 5.04255 5.06296 5.16248 5.24380 5.24934 5.34157 5.51282 5.57016 5.70425 6.36143 6.39645 6.81467 7.06264 7.30886 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.701 5.701 9 C 0.152 3.848 10 C -0.109 4.109 11 H 0.113 0.887 12 C -0.145 4.145 13 C 0.114 3.886 14 H 0.099 0.901 15 N -0.700 5.700 16 C 0.589 3.411 17 O -0.582 6.582 18 C -0.265 4.265 19 C 0.055 3.945 20 O -0.185 6.185 21 C -0.030 4.030 22 C -0.048 4.048 23 O -0.563 6.563 24 Si 0.818 3.182 25 C -0.145 4.145 26 C -0.121 4.121 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.099 0.901 32 H 0.068 0.932 33 H 0.064 0.936 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.416 0.584 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.068 0.932 40 H 0.093 0.907 41 H 0.416 0.584 42 H 0.262 0.738 43 H 0.119 0.881 44 H 0.414 0.586 45 H -0.288 1.288 46 H -0.303 1.303 47 H 0.153 0.847 48 H 0.109 0.891 49 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.588 -0.575 0.785 3.718 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.361 5.361 9 C 0.030 3.970 10 C -0.128 4.128 11 H 0.131 0.869 12 C -0.183 4.183 13 C 0.010 3.990 14 H 0.117 0.883 15 N -0.351 5.351 16 C 0.378 3.622 17 O -0.463 6.463 18 C -0.269 4.269 19 C -0.014 4.014 20 O -0.082 6.082 21 C -0.077 4.077 22 C -0.156 4.156 23 O -0.375 6.375 24 Si 0.722 3.278 25 C -0.164 4.164 26 C -0.159 4.159 27 H 0.080 0.920 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.087 0.913 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.253 0.747 37 H 0.089 0.911 38 H 0.088 0.912 39 H 0.087 0.913 40 H 0.111 0.889 41 H 0.253 0.747 42 H 0.278 0.722 43 H 0.137 0.863 44 H 0.267 0.733 45 H -0.215 1.215 46 H -0.231 1.231 47 H 0.170 0.830 48 H 0.127 0.873 49 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.761 -0.699 -0.337 3.840 hybrid contribution 0.727 0.532 -0.099 0.906 sum -3.034 -0.168 -0.436 3.070 Atomic orbital electron populations 1.22471 0.94021 1.03705 1.03483 1.22354 0.94485 0.92577 0.81554 1.21893 1.02452 0.90942 1.04222 1.22469 1.01627 1.02264 0.97323 1.86313 1.71574 1.23420 1.47272 1.18372 0.78824 0.80779 0.82556 1.90903 1.42353 1.71009 1.44357 1.44765 1.55283 1.13009 1.23017 1.21377 0.99852 0.78091 0.97695 1.22530 1.00998 0.96813 0.92453 0.86864 1.23612 1.01095 0.96825 0.96790 1.22609 0.90098 0.92465 0.93845 0.88324 1.45686 1.25484 1.57752 1.06129 1.17435 0.84272 0.77858 0.82667 1.90780 1.39119 1.53137 1.63287 1.21588 0.99421 1.10985 0.94937 1.25334 0.87696 0.92656 0.95748 1.83730 1.46361 1.62072 1.16043 1.21722 0.96021 1.04600 0.85368 1.24132 1.03210 0.98490 0.89803 1.86412 1.46380 1.59971 1.44766 0.93985 0.72352 0.76907 0.84534 1.22599 0.97068 1.00826 0.95956 1.23306 1.04322 0.95423 0.92889 0.92022 0.89456 0.91723 0.91203 0.88289 0.91257 0.91728 0.89457 0.91965 0.74743 0.91085 0.91168 0.91284 0.88851 0.74657 0.72203 0.86305 0.73284 1.21527 1.23068 0.82963 0.87304 0.89246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.58 8.37 71.98 0.60 0.02 16 2 C 0.13 0.39 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.25 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.58 8.37 71.98 0.60 0.02 16 5 O -0.37 -2.10 9.94 -55.45 -0.55 -2.65 16 6 C 0.64 4.10 8.06 129.79 1.05 5.15 16 7 O -0.60 -6.85 11.88 19.81 0.24 -6.61 16 8 N -0.70 0.28 5.56 -590.85 -3.29 -3.01 16 9 C 0.15 -0.54 5.50 86.38 0.48 -0.06 16 10 C -0.11 0.77 3.75 -10.27 -0.04 0.73 16 11 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 12 C -0.14 0.64 7.45 31.18 0.23 0.88 16 13 C 0.11 -0.29 4.24 45.57 0.19 -0.10 16 14 H 0.10 0.23 7.46 -2.39 -0.02 0.22 16 15 N -0.70 1.28 5.35 -443.07 -2.37 -1.09 16 16 C 0.59 4.28 7.81 86.65 0.68 4.95 16 17 O -0.58 -9.73 16.58 -4.07 -0.07 -9.80 16 18 C -0.26 -1.49 6.31 -18.99 -0.12 -1.61 16 19 C 0.06 -0.05 11.61 67.39 0.78 0.73 16 20 O -0.19 -0.82 8.89 4.38 0.04 -0.78 16 21 C -0.03 -0.17 6.24 24.76 0.15 -0.01 16 22 C -0.05 0.06 2.97 71.24 0.21 0.27 16 23 O -0.56 0.44 12.84 -148.98 -1.91 -1.47 16 24 Si 0.82 -2.64 32.09 68.60 2.20 -0.44 16 25 C -0.14 -1.24 10.87 23.65 0.26 -0.98 16 26 C -0.12 0.96 7.40 31.12 0.23 1.19 16 27 H 0.06 0.16 8.14 -2.39 -0.02 0.15 16 28 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 29 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 30 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 31 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 32 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 34 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 35 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.42 -1.75 8.58 -92.71 -0.80 -2.54 16 37 H 0.07 -0.16 8.14 -2.39 -0.02 -0.17 16 38 H 0.07 -0.18 7.87 -2.39 -0.02 -0.19 16 39 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.09 -0.47 7.92 -2.38 -0.02 -0.48 16 41 H 0.42 -3.85 7.70 -92.71 -0.71 -4.56 16 42 H 0.26 -3.32 7.47 -2.91 -0.02 -3.34 16 43 H 0.12 -0.75 7.96 -2.39 -0.02 -0.77 16 44 H 0.41 -5.20 8.74 -74.05 -0.65 -5.85 16 45 H -0.29 -0.74 7.11 99.48 0.71 -0.03 16 46 H -0.30 -1.66 7.11 99.48 0.71 -0.96 16 47 H 0.15 1.48 8.06 -2.91 -0.02 1.46 16 48 H 0.11 -1.19 8.08 -2.39 -0.02 -1.20 16 49 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 Total: 0.00 -32.37 407.43 -0.90 -33.27 By element: Atomic # 1 Polarization: -18.75 SS G_CDS: -1.12 Total: -19.88 kcal Atomic # 6 Polarization: 6.52 SS G_CDS: 5.93 Total: 12.45 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -5.66 Total: -4.09 kcal Atomic # 8 Polarization: -19.06 SS G_CDS: -2.26 Total: -21.31 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.20 Total: -0.44 kcal Total: -32.37 -0.90 -33.27 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.674 kcal (2) G-P(sol) polarization free energy of solvation -32.369 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds