Wall clock time and date at job start Sat Mar 6 2021 19:57:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52997 * 109.47161 * 2 1 4 4 C 1.53010 * 109.47107 * 240.00412 * 2 1 3 5 5 O 1.45197 * 109.47423 * 120.00578 * 2 1 3 6 6 C 1.34628 * 117.00338 * 59.99802 * 5 2 1 7 7 O 1.21512 * 120.00136 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00130 * 180.02562 * 6 5 2 9 9 C 1.46502 * 120.00081 * 179.97438 * 8 6 5 10 10 C 1.52997 * 109.47154 * 179.97438 * 9 8 6 11 11 H 1.09002 * 112.84856 * 316.19703 * 10 9 8 12 12 C 1.53952 * 113.74094 * 87.40521 * 10 9 8 13 13 C 1.53788 * 87.01908 * 139.94098 * 12 10 9 14 14 H 1.09007 * 113.60976 * 89.22580 * 13 12 10 15 15 N 1.46497 * 113.61578 * 220.04506 * 13 12 10 16 16 C 1.34778 * 119.99833 * 254.13753 * 15 13 12 17 17 O 1.21634 * 120.00140 * 0.02562 * 16 15 13 18 18 C 1.47189 * 119.99733 * 180.02562 * 16 15 13 19 19 C 1.36006 * 123.46007 * 359.97437 * 18 16 15 20 20 S 1.70452 * 110.81669 * 179.74757 * 19 18 16 21 21 C 1.75508 * 92.44341 * 0.36055 * 20 19 18 22 22 C 1.50699 * 124.71183 * 179.90552 * 21 20 19 23 23 O 1.42898 * 109.46964 * 119.69643 * 22 21 20 24 24 Si 1.86301 * 109.47146 * 359.69561 * 22 21 20 25 25 C 1.32765 * 110.57550 * 359.63968 * 21 20 19 26 26 C 1.53783 * 87.17277 * 334.63818 * 13 12 10 27 27 H 1.08995 * 109.46669 * 299.99583 * 1 2 3 28 28 H 1.09002 * 109.46883 * 59.99630 * 1 2 3 29 29 H 1.08998 * 109.46760 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.47484 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.47524 * 299.99977 * 3 2 1 32 32 H 1.09004 * 109.47224 * 60.00585 * 3 2 1 33 33 H 1.08997 * 109.46512 * 299.99428 * 4 2 1 34 34 H 1.08993 * 109.47200 * 59.99916 * 4 2 1 35 35 H 1.09001 * 109.46949 * 179.97438 * 4 2 1 36 36 H 0.97000 * 120.00177 * 359.97438 * 8 6 5 37 37 H 1.09005 * 109.47065 * 60.00140 * 9 8 6 38 38 H 1.08999 * 109.47126 * 300.00633 * 9 8 6 39 39 H 1.08997 * 113.61536 * 25.42539 * 12 10 9 40 40 H 1.09002 * 113.66691 * 254.47085 * 12 10 9 41 41 H 0.97001 * 120.00043 * 74.13942 * 15 13 12 42 42 H 1.07996 * 124.59861 * 0.05805 * 19 18 16 43 43 H 1.09002 * 109.46959 * 239.69614 * 22 21 20 44 44 H 0.96698 * 113.99898 * 299.99550 * 23 22 21 45 45 H 1.48504 * 110.00019 * 58.68329 * 24 22 21 46 46 H 1.48503 * 110.00152 * 180.02562 * 24 22 21 47 47 H 1.07997 * 123.46370 * 180.25045 * 25 21 20 48 48 H 1.08999 * 113.61703 * 139.93644 * 26 13 12 49 49 H 1.09001 * 113.61341 * 270.84319 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0141 -0.6846 1.1854 6 6 1.6524 -1.9723 1.3382 7 8 0.9509 -2.5095 0.5039 8 7 2.0674 -2.6655 2.4170 9 6 1.6734 -4.0667 2.5835 10 6 2.2737 -4.6147 3.8796 11 1 3.3147 -4.3237 4.0202 12 6 1.3948 -4.3733 5.1204 13 6 1.7843 -5.7906 5.5728 14 1 2.6913 -5.8223 6.1766 15 7 0.6768 -6.5411 6.1699 16 6 0.6366 -6.7367 7.5027 17 8 1.5195 -6.2898 8.2100 18 6 -0.4758 -7.4913 8.1025 19 6 -1.4987 -8.0209 7.3794 20 16 -2.6020 -8.8317 8.3946 21 6 -1.6768 -8.4446 9.8349 22 6 -2.0559 -8.8551 11.2344 23 8 -1.0215 -9.6708 11.7882 24 14 -3.6495 -9.8191 11.1887 25 6 -0.5935 -7.7449 9.5195 26 6 2.0204 -6.1171 4.0887 27 1 -0.3632 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6767 1.9563 0.8901 33 1 1.6767 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1393 35 1 3.1300 -0.7208 -1.2496 36 1 2.6271 -2.2367 3.0832 37 1 2.0398 -4.6500 1.7387 38 1 0.5865 -4.1356 2.6283 39 1 0.3350 -4.2643 4.8902 40 1 1.7697 -3.5872 5.7759 41 1 -0.0275 -6.8972 5.6059 42 1 -1.5960 -7.9429 6.3066 43 1 -2.1867 -7.9658 11.8510 44 1 -0.8505 -10.4815 11.2896 45 1 -3.4937 -11.0173 10.3254 46 1 -4.0347 -10.2292 12.5630 47 1 0.1258 -7.4003 10.2477 48 1 2.8997 -6.7368 3.9125 49 1 1.1320 -6.4857 3.5760 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437770_6894386.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:57:04 Heat of formation + Delta-G solvation = -93.874466 kcal Electronic energy + Delta-G solvation = -30121.125555 eV Core-core repulsion = 25756.385376 eV Total energy + Delta-G solvation = -4364.740179 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.74687 -41.32070 -39.98228 -38.80141 -38.17422 -37.14191 -35.84293 -34.95836 -34.24062 -31.78782 -29.09768 -28.31424 -28.27754 -27.01869 -26.92386 -26.02045 -23.88263 -22.81197 -21.92938 -21.43571 -20.83468 -20.24097 -19.06567 -19.01393 -18.11647 -17.84012 -17.60337 -17.22486 -17.07102 -16.50495 -16.43354 -16.05063 -15.96532 -15.68897 -15.47713 -15.39095 -15.12510 -14.73755 -14.46042 -14.36247 -14.08221 -13.77106 -13.69316 -13.61396 -13.47396 -13.37273 -13.19606 -13.01224 -12.83077 -12.81275 -12.71935 -12.48393 -12.42076 -12.33101 -12.21910 -11.90115 -11.84389 -11.58865 -11.27614 -10.97117 -10.93636 -10.76262 -10.21030 -10.13664 -10.02350 -9.54422 -5.15538 -0.40490 0.30059 0.64837 0.86629 1.15108 1.21434 1.48080 1.83455 1.92171 2.08100 2.31845 3.07969 3.20596 3.25266 3.44065 3.49543 3.56530 3.64195 3.79269 3.79495 3.84471 3.89507 3.98553 4.04553 4.23502 4.29083 4.42851 4.48327 4.50870 4.57376 4.58671 4.63631 4.64105 4.67490 4.76551 4.79297 4.84336 4.86789 4.90184 4.94234 4.99480 5.07565 5.11205 5.18404 5.24152 5.37402 5.44560 5.46869 5.62175 6.26356 6.40925 6.42964 7.17625 7.44465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.649 3.351 7 O -0.568 6.568 8 N -0.711 5.711 9 C 0.150 3.850 10 C -0.123 4.123 11 H 0.105 0.895 12 C -0.148 4.148 13 C 0.124 3.876 14 H 0.119 0.881 15 N -0.717 5.717 16 C 0.579 3.421 17 O -0.531 6.531 18 C -0.157 4.157 19 C -0.206 4.206 20 S 0.199 5.801 21 C -0.242 4.242 22 C -0.033 4.033 23 O -0.522 6.522 24 Si 0.650 3.350 25 C -0.054 4.054 26 C -0.134 4.134 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.089 0.911 40 H 0.077 0.923 41 H 0.400 0.600 42 H 0.171 0.829 43 H 0.128 0.872 44 H 0.378 0.622 45 H -0.239 1.239 46 H -0.234 1.234 47 H 0.157 0.843 48 H 0.083 0.917 49 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.965 -0.267 -2.520 3.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.457 6.457 8 N -0.371 5.371 9 C 0.028 3.972 10 C -0.142 4.142 11 H 0.123 0.877 12 C -0.186 4.186 13 C 0.020 3.980 14 H 0.137 0.863 15 N -0.368 5.368 16 C 0.365 3.635 17 O -0.408 6.408 18 C -0.175 4.175 19 C -0.344 4.344 20 S 0.465 5.535 21 C -0.359 4.359 22 C -0.145 4.145 23 O -0.329 6.329 24 Si 0.548 3.452 25 C -0.083 4.083 26 C -0.173 4.173 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.105 0.895 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.092 0.908 38 H 0.091 0.909 39 H 0.107 0.893 40 H 0.096 0.904 41 H 0.235 0.765 42 H 0.189 0.811 43 H 0.146 0.854 44 H 0.226 0.774 45 H -0.163 1.163 46 H -0.157 1.157 47 H 0.174 0.826 48 H 0.102 0.898 49 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -4.415 -1.242 -2.119 5.052 hybrid contribution 2.215 0.289 -0.104 2.236 sum -2.200 -0.953 -2.222 3.269 Atomic orbital electron populations 1.22520 0.93869 1.05014 1.02700 1.22113 0.94433 0.91565 0.81881 1.21879 1.02342 0.92366 1.03332 1.22522 1.01607 1.03433 0.96549 1.86304 1.71499 1.23465 1.46713 1.18108 0.78845 0.80643 0.82167 1.90918 1.40985 1.70518 1.43264 1.44711 1.55898 1.12699 1.23787 1.21323 0.99909 0.78867 0.97131 1.22664 1.00872 0.96677 0.93999 0.87679 1.23638 1.00559 0.97811 0.96633 1.22511 0.91114 0.91243 0.93167 0.86330 1.45817 1.26878 1.56907 1.07171 1.17651 0.84847 0.78975 0.82001 1.90823 1.38707 1.50230 1.61063 1.20266 0.97566 1.05751 0.93916 1.25800 0.99705 1.03901 1.05039 1.83131 1.24712 1.50531 0.95128 1.24754 1.01801 1.09347 0.99960 1.24410 0.99913 1.00320 0.89847 1.86646 1.54974 1.36862 1.54386 0.95317 0.80493 0.84251 0.85095 1.21052 0.97084 0.96176 0.93963 1.23329 1.03319 0.95575 0.95054 0.92125 0.90944 0.89457 0.91392 0.89941 0.91388 0.89449 0.90945 0.92121 0.75812 0.90784 0.90897 0.89273 0.90398 0.76522 0.81148 0.85411 0.77421 1.16296 1.15658 0.82590 0.89830 0.88982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 5 O -0.37 -0.91 9.94 -40.29 -0.40 -1.31 16 6 C 0.65 1.78 8.06 54.06 0.44 2.21 16 7 O -0.57 -2.86 11.88 -19.28 -0.23 -3.09 16 8 N -0.71 0.27 5.56 -65.28 -0.36 -0.09 16 9 C 0.15 -0.26 5.51 -4.04 -0.02 -0.28 16 10 C -0.12 0.42 3.75 -89.72 -0.34 0.09 16 11 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 12 C -0.15 0.35 7.45 -25.83 -0.19 0.16 16 13 C 0.12 -0.21 4.21 -67.12 -0.28 -0.49 16 14 H 0.12 0.01 7.50 -51.93 -0.39 -0.38 16 15 N -0.72 0.89 5.33 -54.16 -0.29 0.61 16 16 C 0.58 1.24 7.79 -12.62 -0.10 1.14 16 17 O -0.53 -3.26 16.41 5.25 0.09 -3.18 16 18 C -0.16 -0.12 5.98 -104.63 -0.63 -0.75 16 19 C -0.21 0.39 10.38 29.93 0.31 0.70 16 20 S 0.20 -0.41 20.18 -107.50 -2.17 -2.58 16 21 C -0.24 0.09 5.68 -36.18 -0.21 -0.12 16 22 C -0.03 0.02 2.95 36.01 0.11 0.13 16 23 O -0.52 -0.43 12.85 -35.23 -0.45 -0.88 16 24 Si 0.65 -1.08 30.91 -169.99 -5.25 -6.33 16 25 C -0.05 -0.07 9.91 -39.02 -0.39 -0.46 16 26 C -0.13 0.49 7.39 -25.92 -0.19 0.30 16 27 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.89 8.58 -40.82 -0.35 -1.24 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 -0.09 7.86 -51.93 -0.41 -0.49 16 39 H 0.09 -0.20 7.91 -51.93 -0.41 -0.62 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.40 -1.57 7.21 -40.82 -0.29 -1.86 16 42 H 0.17 -0.83 7.01 -52.49 -0.37 -1.20 16 43 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 44 H 0.38 -0.80 8.70 45.56 0.40 -0.40 16 45 H -0.24 0.04 7.11 56.52 0.40 0.44 16 46 H -0.23 -0.29 7.11 56.52 0.40 0.11 16 47 H 0.16 0.38 8.06 -52.49 -0.42 -0.04 16 48 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 49 H 0.09 -0.42 8.07 -51.93 -0.42 -0.84 16 LS Contribution 413.25 15.07 6.23 6.23 Total: 0.00 -9.18 413.25 -11.02 -20.20 By element: Atomic # 1 Polarization: -5.28 SS G_CDS: -7.54 Total: -12.82 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: -0.64 Total: 3.26 kcal Atomic # 7 Polarization: 1.17 SS G_CDS: -0.65 Total: 0.51 kcal Atomic # 8 Polarization: -7.47 SS G_CDS: -1.00 Total: -8.46 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.25 Total: -6.33 kcal Atomic # 16 Polarization: -0.41 SS G_CDS: -2.17 Total: -2.58 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -9.18 -11.02 -20.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_6894386.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.676 kcal (2) G-P(sol) polarization free energy of solvation -9.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.198 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds