Wall clock time and date at job start Sat Mar 6 2021 19:57:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52997 * 109.47161 * 2 1 4 4 C 1.53010 * 109.47107 * 240.00412 * 2 1 3 5 5 O 1.45197 * 109.47423 * 120.00578 * 2 1 3 6 6 C 1.34628 * 117.00338 * 59.99802 * 5 2 1 7 7 O 1.21512 * 120.00136 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00130 * 180.02562 * 6 5 2 9 9 C 1.46502 * 120.00081 * 179.97438 * 8 6 5 10 10 C 1.52997 * 109.47154 * 179.97438 * 9 8 6 11 11 H 1.09002 * 112.84856 * 316.19703 * 10 9 8 12 12 C 1.53952 * 113.74094 * 87.40521 * 10 9 8 13 13 C 1.53788 * 87.01908 * 139.94098 * 12 10 9 14 14 H 1.09007 * 113.60976 * 89.22580 * 13 12 10 15 15 N 1.46497 * 113.61578 * 220.04506 * 13 12 10 16 16 C 1.34778 * 119.99833 * 254.13753 * 15 13 12 17 17 O 1.21634 * 120.00140 * 0.02562 * 16 15 13 18 18 C 1.47189 * 119.99733 * 180.02562 * 16 15 13 19 19 C 1.36006 * 123.46007 * 359.97437 * 18 16 15 20 20 S 1.70452 * 110.81669 * 179.74757 * 19 18 16 21 21 C 1.75508 * 92.44341 * 0.36055 * 20 19 18 22 22 C 1.50699 * 124.71183 * 179.90552 * 21 20 19 23 23 O 1.42898 * 109.46964 * 119.69643 * 22 21 20 24 24 Si 1.86301 * 109.47146 * 359.69561 * 22 21 20 25 25 C 1.32765 * 110.57550 * 359.63968 * 21 20 19 26 26 C 1.53783 * 87.17277 * 334.63818 * 13 12 10 27 27 H 1.08995 * 109.46669 * 299.99583 * 1 2 3 28 28 H 1.09002 * 109.46883 * 59.99630 * 1 2 3 29 29 H 1.08998 * 109.46760 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.47484 * 180.02562 * 3 2 1 31 31 H 1.09002 * 109.47524 * 299.99977 * 3 2 1 32 32 H 1.09004 * 109.47224 * 60.00585 * 3 2 1 33 33 H 1.08997 * 109.46512 * 299.99428 * 4 2 1 34 34 H 1.08993 * 109.47200 * 59.99916 * 4 2 1 35 35 H 1.09001 * 109.46949 * 179.97438 * 4 2 1 36 36 H 0.97000 * 120.00177 * 359.97438 * 8 6 5 37 37 H 1.09005 * 109.47065 * 60.00140 * 9 8 6 38 38 H 1.08999 * 109.47126 * 300.00633 * 9 8 6 39 39 H 1.08997 * 113.61536 * 25.42539 * 12 10 9 40 40 H 1.09002 * 113.66691 * 254.47085 * 12 10 9 41 41 H 0.97001 * 120.00043 * 74.13942 * 15 13 12 42 42 H 1.07996 * 124.59861 * 0.05805 * 19 18 16 43 43 H 1.09002 * 109.46959 * 239.69614 * 22 21 20 44 44 H 0.96698 * 113.99898 * 299.99550 * 23 22 21 45 45 H 1.48504 * 110.00019 * 58.68329 * 24 22 21 46 46 H 1.48503 * 110.00152 * 180.02562 * 24 22 21 47 47 H 1.07997 * 123.46370 * 180.25045 * 25 21 20 48 48 H 1.08999 * 113.61703 * 139.93644 * 26 13 12 49 49 H 1.09001 * 113.61341 * 270.84319 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0141 -0.6846 1.1854 6 6 1.6524 -1.9723 1.3382 7 8 0.9509 -2.5095 0.5039 8 7 2.0674 -2.6655 2.4170 9 6 1.6734 -4.0667 2.5835 10 6 2.2737 -4.6147 3.8796 11 1 3.3147 -4.3237 4.0202 12 6 1.3948 -4.3733 5.1204 13 6 1.7843 -5.7906 5.5728 14 1 2.6913 -5.8223 6.1766 15 7 0.6768 -6.5411 6.1699 16 6 0.6366 -6.7367 7.5027 17 8 1.5195 -6.2898 8.2100 18 6 -0.4758 -7.4913 8.1025 19 6 -1.4987 -8.0209 7.3794 20 16 -2.6020 -8.8317 8.3946 21 6 -1.6768 -8.4446 9.8349 22 6 -2.0559 -8.8551 11.2344 23 8 -1.0215 -9.6708 11.7882 24 14 -3.6495 -9.8191 11.1887 25 6 -0.5935 -7.7449 9.5195 26 6 2.0204 -6.1171 4.0887 27 1 -0.3632 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6767 1.9563 0.8901 33 1 1.6767 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1393 35 1 3.1300 -0.7208 -1.2496 36 1 2.6271 -2.2367 3.0832 37 1 2.0398 -4.6500 1.7387 38 1 0.5865 -4.1356 2.6283 39 1 0.3350 -4.2643 4.8902 40 1 1.7697 -3.5872 5.7759 41 1 -0.0275 -6.8972 5.6059 42 1 -1.5960 -7.9429 6.3066 43 1 -2.1867 -7.9658 11.8510 44 1 -0.8505 -10.4815 11.2896 45 1 -3.4937 -11.0173 10.3254 46 1 -4.0347 -10.2292 12.5630 47 1 0.1258 -7.4003 10.2477 48 1 2.8997 -6.7368 3.9125 49 1 1.1320 -6.4857 3.5760 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437770_6894386.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:57:03 Heat of formation + Delta-G solvation = -95.237853 kcal Electronic energy + Delta-G solvation = -30121.184676 eV Core-core repulsion = 25756.385376 eV Total energy + Delta-G solvation = -4364.799300 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.84868 -41.34186 -39.93864 -38.82693 -38.26580 -37.17416 -35.95675 -35.03419 -34.27784 -31.74879 -29.05151 -28.37543 -28.31067 -26.97855 -26.72237 -26.01409 -23.87793 -22.81718 -21.94527 -21.41305 -20.85862 -20.20466 -19.11607 -18.96868 -18.12532 -17.85540 -17.64067 -17.32473 -17.07337 -16.46297 -16.38968 -16.04254 -16.02269 -15.74453 -15.50703 -15.43696 -15.11103 -14.73484 -14.47611 -14.43106 -14.06446 -13.72800 -13.59919 -13.46846 -13.41651 -13.33326 -13.16352 -12.98856 -12.91316 -12.87485 -12.66777 -12.50430 -12.43578 -12.38947 -12.20696 -11.84931 -11.72952 -11.45712 -11.39511 -11.13323 -11.01968 -10.76767 -10.23373 -10.15129 -9.96624 -9.44384 -5.05273 -0.33850 0.39519 0.70065 0.81211 1.17303 1.22520 1.55790 1.75038 1.90328 2.13116 2.24819 3.11807 3.29449 3.42112 3.57804 3.59547 3.73437 3.74132 3.78583 3.79915 3.91776 3.93665 3.97937 4.20076 4.28872 4.41138 4.49873 4.51279 4.60425 4.62363 4.71163 4.71732 4.75310 4.75624 4.81496 4.82646 4.86625 4.86919 4.98383 5.00029 5.06437 5.08392 5.16748 5.19624 5.26172 5.28114 5.36574 5.55755 5.59045 6.38092 6.39637 6.47269 7.15011 7.32847 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.701 5.701 9 C 0.152 3.848 10 C -0.109 4.109 11 H 0.112 0.888 12 C -0.145 4.145 13 C 0.115 3.885 14 H 0.097 0.903 15 N -0.700 5.700 16 C 0.575 3.425 17 O -0.585 6.585 18 C -0.185 4.185 19 C -0.189 4.189 20 S 0.250 5.750 21 C -0.247 4.247 22 C -0.047 4.047 23 O -0.545 6.545 24 Si 0.730 3.270 25 C -0.077 4.077 26 C -0.121 4.121 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.068 0.932 33 H 0.064 0.936 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.416 0.584 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.093 0.907 40 H 0.067 0.933 41 H 0.415 0.585 42 H 0.205 0.795 43 H 0.129 0.871 44 H 0.388 0.612 45 H -0.251 1.251 46 H -0.276 1.276 47 H 0.131 0.869 48 H 0.089 0.911 49 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.138 -0.484 -4.208 5.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.361 5.361 9 C 0.030 3.970 10 C -0.128 4.128 11 H 0.131 0.869 12 C -0.183 4.183 13 C 0.010 3.990 14 H 0.115 0.885 15 N -0.351 5.351 16 C 0.362 3.638 17 O -0.467 6.467 18 C -0.202 4.202 19 C -0.328 4.328 20 S 0.517 5.483 21 C -0.363 4.363 22 C -0.158 4.158 23 O -0.353 6.353 24 Si 0.631 3.369 25 C -0.106 4.106 26 C -0.159 4.159 27 H 0.080 0.920 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.252 0.748 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.111 0.889 40 H 0.086 0.914 41 H 0.253 0.747 42 H 0.222 0.778 43 H 0.147 0.853 44 H 0.238 0.762 45 H -0.176 1.176 46 H -0.202 1.202 47 H 0.149 0.851 48 H 0.107 0.893 49 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -5.580 -1.454 -3.840 6.928 hybrid contribution 2.542 0.325 0.442 2.600 sum -3.038 -1.130 -3.397 4.695 Atomic orbital electron populations 1.22470 0.93992 1.03731 1.03483 1.22350 0.94505 0.92548 0.81552 1.21895 1.02438 0.90980 1.04220 1.22472 1.01612 1.02278 0.97324 1.86309 1.71584 1.23428 1.47276 1.18369 0.78830 0.80770 0.82560 1.90903 1.42292 1.71013 1.44384 1.44776 1.55259 1.13038 1.23017 1.21377 0.99853 0.78080 0.97678 1.22562 1.00885 0.96856 0.92519 0.86948 1.23610 1.00938 0.96942 0.96841 1.22546 0.90360 0.92054 0.94046 0.88488 1.45717 1.27167 1.55982 1.06272 1.17947 0.84570 0.78552 0.82699 1.90788 1.40774 1.52723 1.62408 1.20134 0.98552 1.07727 0.93837 1.26186 0.98216 1.01675 1.06698 1.82965 1.23107 1.49046 0.93206 1.24834 1.01709 1.08761 1.01031 1.24736 1.00393 1.00778 0.89844 1.86610 1.55821 1.37701 1.55185 0.94455 0.78160 0.82305 0.82016 1.20979 0.97649 0.97633 0.94343 1.23299 1.04289 0.95291 0.93026 0.92013 0.89465 0.91683 0.91233 0.88301 0.91250 0.91699 0.89470 0.91990 0.74763 0.91076 0.91146 0.88886 0.91427 0.74711 0.77797 0.85298 0.76225 1.17620 1.20181 0.85114 0.89274 0.87342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.28 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.53 8.37 71.99 0.60 0.07 16 5 O -0.37 -2.01 9.94 -55.38 -0.55 -2.56 16 6 C 0.64 3.91 8.06 129.79 1.05 4.95 16 7 O -0.59 -6.62 11.88 19.80 0.24 -6.38 16 8 N -0.70 0.45 5.56 -590.85 -3.29 -2.83 16 9 C 0.15 -0.58 5.51 86.38 0.48 -0.10 16 10 C -0.11 0.80 3.75 -10.21 -0.04 0.76 16 11 H 0.11 -0.93 8.14 -2.39 -0.02 -0.95 16 12 C -0.14 0.66 7.45 31.18 0.23 0.89 16 13 C 0.11 -0.33 4.21 45.52 0.19 -0.14 16 14 H 0.10 0.20 7.50 -2.38 -0.02 0.18 16 15 N -0.70 1.70 5.33 -443.50 -2.36 -0.66 16 16 C 0.58 3.29 7.79 86.59 0.67 3.97 16 17 O -0.59 -9.00 16.41 -4.14 -0.07 -9.06 16 18 C -0.18 -0.41 5.98 -19.87 -0.12 -0.53 16 19 C -0.19 1.00 10.38 67.30 0.70 1.70 16 20 S 0.25 -1.43 20.18 -56.49 -1.14 -2.57 16 21 C -0.25 0.06 5.68 24.51 0.14 0.20 16 22 C -0.05 0.03 2.95 71.24 0.21 0.24 16 23 O -0.54 -1.64 12.85 -148.98 -1.91 -3.55 16 24 Si 0.73 -2.64 30.91 68.60 2.12 -0.52 16 25 C -0.08 -0.35 9.91 22.67 0.22 -0.13 16 26 C -0.12 1.00 7.39 31.12 0.23 1.23 16 27 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 28 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 29 H 0.06 0.52 5.88 -2.39 -0.01 0.50 16 30 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 31 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 32 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 33 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 34 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 35 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 36 H 0.42 -1.83 8.58 -92.71 -0.80 -2.62 16 37 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 38 H 0.07 -0.20 7.86 -2.39 -0.02 -0.21 16 39 H 0.09 -0.47 7.91 -2.39 -0.02 -0.49 16 40 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 41 H 0.41 -3.84 7.21 -92.71 -0.67 -4.51 16 42 H 0.21 -2.64 7.01 -2.91 -0.02 -2.66 16 43 H 0.13 -0.21 7.96 -2.39 -0.02 -0.23 16 44 H 0.39 -1.24 8.70 -74.06 -0.64 -1.88 16 45 H -0.25 0.39 7.11 99.48 0.71 1.10 16 46 H -0.28 -0.95 7.11 99.48 0.71 -0.24 16 47 H 0.13 1.16 8.06 -2.91 -0.02 1.14 16 48 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 49 H 0.11 -1.21 8.07 -2.39 -0.02 -1.23 16 Total: 0.00 -24.96 413.25 -2.24 -27.21 By element: Atomic # 1 Polarization: -12.46 SS G_CDS: -1.07 Total: -13.53 kcal Atomic # 6 Polarization: 8.66 SS G_CDS: 5.80 Total: 14.46 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -5.65 Total: -3.49 kcal Atomic # 8 Polarization: -19.26 SS G_CDS: -2.30 Total: -21.55 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.12 Total: -0.52 kcal Atomic # 16 Polarization: -1.43 SS G_CDS: -1.14 Total: -2.57 kcal Total: -24.96 -2.24 -27.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437770_6894386.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.030 kcal (2) G-P(sol) polarization free energy of solvation -24.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.208 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.238 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds