Wall clock time and date at job start Sat Mar 6 2021 19:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.47676 * 2 1 4 4 C 1.53004 * 109.47353 * 239.99753 * 2 1 3 5 5 O 1.45208 * 109.46830 * 120.00081 * 2 1 3 6 6 C 1.34633 * 116.99886 * 60.00120 * 5 2 1 7 7 O 1.21507 * 120.00555 * 359.97438 * 6 5 2 8 8 N 1.34784 * 119.99596 * 179.97438 * 6 5 2 9 9 C 1.46494 * 119.99635 * 179.97438 * 8 6 5 10 10 C 1.53002 * 109.47001 * 180.02562 * 9 8 6 11 11 H 1.09004 * 112.84519 * 314.66374 * 10 9 8 12 12 C 1.53780 * 113.61863 * 85.86173 * 10 9 8 13 13 C 1.53956 * 87.01914 * 139.95388 * 12 10 9 14 14 H 1.08994 * 113.73803 * 220.05470 * 13 12 10 15 15 N 1.46498 * 113.53626 * 89.19133 * 13 12 10 16 16 C 1.34784 * 120.00194 * 107.50159 * 15 13 12 17 17 O 1.21697 * 119.99503 * 0.02562 * 16 15 13 18 18 C 1.46668 * 119.99890 * 179.97438 * 16 15 13 19 19 C 1.37874 * 126.23115 * 179.97438 * 18 16 15 20 20 C 1.39838 * 107.08306 * 179.97438 * 19 18 16 21 21 C 1.50700 * 126.06603 * 180.02562 * 20 19 18 22 22 O 1.42903 * 109.47234 * 300.00399 * 21 20 19 23 23 Si 1.86294 * 109.47461 * 180.02562 * 21 20 19 24 24 C 1.35447 * 107.86685 * 0.02562 * 20 19 18 25 25 N 1.35534 * 108.87122 * 359.76589 * 24 20 19 26 26 C 1.53777 * 87.11075 * 334.63710 * 13 12 10 27 27 H 1.08998 * 109.47144 * 300.00036 * 1 2 3 28 28 H 1.08999 * 109.46619 * 60.00302 * 1 2 3 29 29 H 1.08996 * 109.46980 * 180.02562 * 1 2 3 30 30 H 1.08994 * 109.47596 * 180.02562 * 3 2 1 31 31 H 1.09009 * 109.46889 * 300.00117 * 3 2 1 32 32 H 1.09003 * 109.46990 * 59.99073 * 3 2 1 33 33 H 1.09005 * 109.46836 * 300.00480 * 4 2 1 34 34 H 1.08999 * 109.46845 * 60.00089 * 4 2 1 35 35 H 1.08994 * 109.47403 * 180.02562 * 4 2 1 36 36 H 0.96995 * 120.00015 * 359.72334 * 8 6 5 37 37 H 1.09005 * 109.47306 * 299.99972 * 9 8 6 38 38 H 1.09002 * 109.47518 * 60.00210 * 9 8 6 39 39 H 1.08997 * 113.61427 * 254.53489 * 12 10 9 40 40 H 1.08996 * 113.61303 * 25.42971 * 12 10 9 41 41 H 0.97000 * 120.00197 * 287.50027 * 15 13 12 42 42 H 1.07999 * 126.46041 * 359.93455 * 19 18 16 43 43 H 1.09001 * 109.47276 * 60.00258 * 21 20 19 44 44 H 0.96700 * 114.00360 * 179.97438 * 22 21 20 45 45 H 1.48501 * 109.99922 * 298.68576 * 23 21 20 46 46 H 1.48509 * 109.99843 * 60.00104 * 23 21 20 47 47 H 1.08000 * 125.56395 * 179.97438 * 24 20 19 48 48 H 0.97002 * 125.67244 * 180.26838 * 25 24 20 49 49 H 1.08999 * 113.61622 * 270.81361 * 26 13 12 50 50 H 1.09005 * 113.68704 * 139.92370 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5041 8 7 2.0680 -2.6657 2.4167 9 6 1.6739 -4.0668 2.5832 10 6 2.2740 -4.6149 3.8795 11 1 3.3227 -4.3461 4.0072 12 6 1.4116 -4.3391 5.1225 13 6 1.7724 -5.7612 5.5892 14 1 0.9407 -6.2971 6.0464 15 7 2.9971 -5.8207 6.3910 16 6 2.9235 -6.0435 7.7183 17 8 1.8397 -6.1957 8.2505 18 6 4.1496 -6.1037 8.5208 19 6 4.2240 -6.3226 9.8800 20 6 5.5787 -6.3008 10.2261 21 6 6.1443 -6.4957 11.6093 22 8 5.6330 -5.4844 12.4799 23 14 8.0022 -6.3760 11.5431 24 6 6.2923 -6.0735 9.0975 25 7 5.4360 -5.9566 8.0535 26 6 1.9890 -6.1088 4.1070 27 1 -0.3633 0.5138 0.8900 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1301 1.4424 -0.0005 31 1 1.6768 1.9563 -0.8901 32 1 1.6767 1.9563 0.8899 33 1 1.6767 -1.7490 -1.2492 34 1 1.6768 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6311 -2.2381 3.0807 37 1 0.5870 -4.1356 2.6289 38 1 2.0396 -4.6501 1.7381 39 1 1.8099 -3.5536 5.7647 40 1 0.3529 -4.2083 4.8991 41 1 3.8609 -5.6997 5.9667 42 1 3.3927 -6.4804 10.5511 43 1 5.8563 -7.4777 11.9846 44 1 5.9553 -5.5485 13.3893 45 1 8.5489 -7.4422 10.6658 46 1 8.4073 -5.0413 11.0333 47 1 7.3683 -6.0008 9.0386 48 1 5.6878 -5.7950 7.1308 49 1 1.0883 -6.4627 3.6054 50 1 2.8523 -6.7501 3.9292 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437852_10543058.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:57:31 Heat of formation + Delta-G solvation = -74.793704 kcal Electronic energy + Delta-G solvation = -30605.236741 eV Core-core repulsion = 26214.971949 eV Total energy + Delta-G solvation = -4390.264792 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.56353 -41.75890 -41.13744 -39.41268 -38.20559 -37.60718 -35.87969 -34.96965 -34.22782 -32.66182 -30.85038 -29.12853 -28.33723 -28.29680 -26.96656 -26.56534 -24.89673 -23.74792 -22.87497 -21.37028 -21.20901 -20.78136 -20.42548 -19.70179 -19.08095 -18.29476 -17.69376 -17.31531 -17.24678 -17.08031 -16.43610 -16.35501 -15.94896 -15.75650 -15.57884 -15.32815 -15.11755 -15.02612 -14.88738 -14.73043 -14.42967 -14.31734 -14.09496 -13.96125 -13.67907 -13.42807 -13.37676 -13.31057 -13.02075 -12.86070 -12.83537 -12.48843 -12.38450 -12.29008 -12.24791 -11.96133 -11.85065 -11.51482 -11.29976 -11.20317 -10.97589 -10.35445 -10.30204 -10.19657 -9.91012 -9.35783 -5.02796 0.33881 1.18490 1.26941 1.44392 1.65084 1.83586 1.89425 1.90685 1.96303 2.30602 3.03395 3.20298 3.39589 3.48781 3.51806 3.59581 3.73010 3.77038 3.81157 3.82244 3.96181 3.96896 4.03469 4.25493 4.32324 4.41871 4.52815 4.53490 4.55429 4.57515 4.62152 4.66092 4.71467 4.77187 4.81249 4.82264 4.84684 4.87996 4.92219 4.93298 5.01691 5.06894 5.18945 5.35575 5.37254 5.44475 5.54123 5.59131 5.74089 6.12065 6.33128 6.39173 6.72933 7.05483 7.41474 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.649 3.351 7 O -0.566 6.566 8 N -0.712 5.712 9 C 0.147 3.853 10 C -0.127 4.127 11 H 0.096 0.904 12 C -0.146 4.146 13 C 0.121 3.879 14 H 0.111 0.889 15 N -0.716 5.716 16 C 0.595 3.405 17 O -0.519 6.519 18 C -0.059 4.059 19 C -0.069 4.069 20 C -0.164 4.164 21 C -0.037 4.037 22 O -0.547 6.547 23 Si 0.686 3.314 24 C 0.028 3.972 25 N -0.535 5.535 26 C -0.133 4.133 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.059 0.941 36 H 0.406 0.594 37 H 0.075 0.925 38 H 0.073 0.927 39 H 0.075 0.925 40 H 0.098 0.902 41 H 0.394 0.606 42 H 0.153 0.847 43 H 0.072 0.928 44 H 0.380 0.620 45 H -0.257 1.257 46 H -0.253 1.253 47 H 0.167 0.833 48 H 0.418 0.582 49 H 0.104 0.896 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.952 -0.322 0.720 6.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.455 6.455 8 N -0.371 5.371 9 C 0.025 3.975 10 C -0.146 4.146 11 H 0.114 0.886 12 C -0.185 4.185 13 C 0.016 3.984 14 H 0.129 0.871 15 N -0.367 5.367 16 C 0.383 3.617 17 O -0.394 6.394 18 C -0.171 4.171 19 C -0.095 4.095 20 C -0.171 4.171 21 C -0.148 4.148 22 O -0.353 6.353 23 Si 0.587 3.413 24 C -0.108 4.108 25 N -0.131 5.131 26 C -0.172 4.172 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.105 0.895 34 H 0.091 0.909 35 H 0.078 0.922 36 H 0.240 0.760 37 H 0.094 0.906 38 H 0.091 0.909 39 H 0.093 0.907 40 H 0.116 0.884 41 H 0.228 0.772 42 H 0.171 0.829 43 H 0.090 0.910 44 H 0.227 0.773 45 H -0.182 1.182 46 H -0.178 1.178 47 H 0.184 0.816 48 H 0.256 0.744 49 H 0.123 0.877 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 5.166 -0.308 -0.611 5.211 hybrid contribution 0.481 0.314 -0.736 0.934 sum 5.647 0.007 -1.347 5.806 Atomic orbital electron populations 1.22521 0.93817 1.05054 1.02733 1.22121 0.94479 0.91552 0.81845 1.21879 1.02292 0.92371 1.03364 1.22521 1.01554 1.03451 0.96576 1.86304 1.71518 1.23473 1.46754 1.18114 0.78873 0.80648 0.82164 1.90923 1.40910 1.70500 1.43199 1.44702 1.55729 1.12769 1.23921 1.21368 1.00209 0.78780 0.97147 1.22909 1.00361 0.97031 0.94274 0.88577 1.23586 1.01020 0.97563 0.96335 1.21875 0.88052 0.97581 0.90912 0.87128 1.45538 1.09225 1.74355 1.07615 1.16989 0.87407 0.76174 0.81141 1.90886 1.27851 1.49395 1.71246 1.20387 0.83395 1.18472 0.94837 1.21216 0.96547 0.99701 0.92081 1.18823 0.93652 1.11523 0.93126 1.23980 1.09233 0.93333 0.88272 1.86513 1.73257 1.52018 1.23480 0.95069 0.75785 0.80512 0.89926 1.21661 0.95574 1.06508 0.87096 1.41843 1.05603 1.55749 1.09895 1.23307 1.03783 0.95110 0.94961 0.92109 0.90907 0.89436 0.91431 0.89907 0.91386 0.89451 0.90902 0.92165 0.75983 0.90631 0.90856 0.90650 0.88377 0.77242 0.82887 0.91032 0.77264 1.18181 1.17777 0.81572 0.74449 0.87741 0.90275 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 2 C 0.14 0.21 1.13 -90.62 -0.10 0.10 16 3 C -0.14 0.08 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 5 O -0.37 -0.94 9.94 -40.30 -0.40 -1.34 16 6 C 0.65 1.85 8.06 54.06 0.44 2.28 16 7 O -0.57 -2.98 11.88 -19.28 -0.23 -3.21 16 8 N -0.71 0.27 5.56 -65.28 -0.36 -0.09 16 9 C 0.15 -0.24 5.50 -4.04 -0.02 -0.26 16 10 C -0.13 0.47 3.62 -89.81 -0.33 0.14 16 11 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 12 C -0.15 0.33 7.44 -25.83 -0.19 0.13 16 13 C 0.12 -0.18 4.33 -67.03 -0.29 -0.48 16 14 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 15 N -0.72 0.98 5.26 -54.24 -0.29 0.70 16 16 C 0.60 1.46 7.79 -12.85 -0.10 1.36 16 17 O -0.52 -3.36 16.48 5.19 0.09 -3.27 16 18 C -0.06 -0.11 7.06 -81.98 -0.58 -0.69 16 19 C -0.07 -0.23 10.59 -39.12 -0.41 -0.64 16 20 C -0.16 -0.34 5.47 -105.02 -0.57 -0.91 16 21 C -0.04 0.00 3.01 36.01 0.11 0.11 16 22 O -0.55 -0.36 12.85 -35.23 -0.45 -0.82 16 23 Si 0.69 -1.29 30.59 -169.99 -5.20 -6.49 16 24 C 0.03 0.01 10.45 -16.91 -0.18 -0.17 16 25 N -0.53 0.57 5.99 -9.39 -0.06 0.52 16 26 C -0.13 0.48 7.39 -25.92 -0.19 0.29 16 27 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.90 8.58 -40.82 -0.35 -1.25 16 37 H 0.08 -0.06 7.87 -51.93 -0.41 -0.47 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.10 -0.20 7.92 -51.93 -0.41 -0.61 16 41 H 0.39 -1.68 7.83 -40.82 -0.32 -2.00 16 42 H 0.15 0.58 8.06 -52.49 -0.42 0.16 16 43 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 44 H 0.38 -1.70 8.74 45.56 0.40 -1.30 16 45 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 46 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 47 H 0.17 -0.27 6.19 -52.49 -0.32 -0.59 16 48 H 0.42 -1.99 8.19 -40.82 -0.33 -2.33 16 49 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 50 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 LS Contribution 408.42 15.07 6.15 6.15 Total: 0.00 -11.29 408.42 -10.07 -21.36 By element: Atomic # 1 Polarization: -7.40 SS G_CDS: -7.85 Total: -15.25 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: -1.47 Total: 1.74 kcal Atomic # 7 Polarization: 1.83 SS G_CDS: -0.70 Total: 1.12 kcal Atomic # 8 Polarization: -7.65 SS G_CDS: -1.00 Total: -8.64 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.20 Total: -6.49 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -11.29 -10.07 -21.36 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_10543058.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.434 kcal (2) G-P(sol) polarization free energy of solvation -11.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.072 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.360 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.794 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds