Wall clock time and date at job start Sat Mar 6 2021 19:57:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35532 * 125.68235 * 2 1 4 4 C 1.35454 * 108.87171 * 179.71312 * 3 2 1 5 5 C 1.50695 * 126.06362 * 180.30053 * 4 3 2 6 6 O 1.42902 * 109.47163 * 119.97595 * 5 4 3 7 7 Si 1.86301 * 109.47358 * 359.97438 * 5 4 3 8 8 C 1.39830 * 107.86405 * 0.26579 * 4 3 2 9 9 C 1.37654 * 125.67431 * 180.16535 * 2 1 3 10 10 C 1.46677 * 126.23654 * 359.97438 * 9 2 1 11 11 O 1.21697 * 119.99732 * 355.36522 * 10 9 2 12 12 N 1.34773 * 120.00430 * 175.36347 * 10 9 2 13 13 C 1.46499 * 120.00298 * 185.11479 * 12 10 9 14 14 H 1.09001 * 112.84772 * 25.33950 * 13 12 10 15 15 C 1.53793 * 113.61183 * 156.53015 * 13 12 10 16 16 C 1.53777 * 87.07757 * 89.11826 * 15 13 12 17 17 H 1.09003 * 113.61832 * 270.87743 * 16 15 13 18 18 C 1.53004 * 113.61512 * 140.06480 * 16 15 13 19 19 N 1.46492 * 109.47475 * 174.99871 * 18 16 15 20 20 C 1.34779 * 119.99931 * 179.97438 * 19 18 16 21 21 O 1.21507 * 120.00152 * 359.97438 * 20 19 18 22 22 O 1.34640 * 119.99810 * 180.02562 * 20 19 18 23 23 C 1.45206 * 116.99979 * 180.02562 * 22 20 19 24 24 C 1.52998 * 109.46995 * 59.99389 * 23 22 20 25 25 C 1.52993 * 109.47082 * 179.97438 * 23 22 20 26 26 C 1.53002 * 109.46824 * 299.99704 * 23 22 20 27 27 C 1.53778 * 113.61616 * 254.13513 * 13 12 10 28 28 H 1.09003 * 109.47336 * 95.50003 * 1 2 3 29 29 H 1.08999 * 109.47224 * 215.49766 * 1 2 3 30 30 H 1.09001 * 109.46792 * 335.49546 * 1 2 3 31 31 H 1.08002 * 125.55898 * 359.97438 * 3 2 1 32 32 H 1.09002 * 109.47144 * 239.97344 * 5 4 3 33 33 H 0.96703 * 114.00266 * 179.97438 * 6 5 4 34 34 H 1.48500 * 110.00158 * 298.67898 * 7 5 4 35 35 H 1.48498 * 110.00174 * 60.00105 * 7 5 4 36 36 H 1.08006 * 126.45682 * 179.97438 * 8 4 3 37 37 H 0.97002 * 119.99855 * 5.11954 * 12 10 9 38 38 H 1.08995 * 113.61109 * 203.66394 * 15 13 12 39 39 H 1.08996 * 113.61531 * 334.48304 * 15 13 12 40 40 H 1.09009 * 109.46625 * 295.00056 * 18 16 15 41 41 H 1.09003 * 109.46900 * 54.99283 * 18 16 15 42 42 H 0.96996 * 120.00258 * 0.02562 * 19 18 16 43 43 H 1.09001 * 109.47145 * 60.00851 * 24 23 22 44 44 H 1.08999 * 109.46791 * 180.02562 * 24 23 22 45 45 H 1.08998 * 109.47422 * 300.00085 * 24 23 22 46 46 H 1.08996 * 109.47527 * 59.99504 * 25 23 22 47 47 H 1.08999 * 109.47183 * 179.97438 * 25 23 22 48 48 H 1.09001 * 109.46806 * 299.99797 * 25 23 22 49 49 H 1.09000 * 109.47255 * 59.99546 * 26 23 22 50 50 H 1.08999 * 109.46926 * 180.02562 * 26 23 22 51 51 H 1.09002 * 109.46653 * 300.00271 * 26 23 22 52 52 H 1.09004 * 113.61292 * 25.43852 * 27 13 12 53 53 H 1.09007 * 113.61318 * 156.33284 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7091 0.0064 5 6 4.7536 1.6187 0.0150 6 8 5.5332 1.3670 1.1860 7 14 4.1887 3.3940 0.0148 8 6 3.5779 -0.6889 0.0044 9 6 2.2677 -1.1182 -0.0032 10 6 1.8123 -2.5125 -0.0067 11 8 0.6248 -2.7649 0.0782 12 7 2.7088 -3.5141 -0.1040 13 6 2.2489 -4.9001 -0.2204 14 1 1.2496 -4.9800 -0.6483 15 6 3.2767 -5.8371 -0.8769 16 6 3.8350 -6.0848 0.5344 17 1 4.6108 -5.3774 0.8275 18 6 4.2310 -7.5404 0.7901 19 7 4.8581 -7.6514 2.1094 20 6 5.2898 -8.8491 2.5517 21 8 5.1585 -9.8369 1.8565 22 8 5.8656 -8.9511 3.7645 23 6 6.3072 -10.2720 4.1755 24 6 7.3463 -10.7945 3.1816 25 6 6.9317 -10.1899 5.5698 26 6 5.1091 -11.2230 4.2080 27 6 2.4357 -5.7213 1.0663 28 1 -0.3634 -0.0985 -1.0229 29 1 -0.3633 -0.8366 0.5967 30 1 -0.3633 0.9351 0.4263 31 1 1.9082 2.1235 -0.0004 32 1 5.3587 1.4298 -0.8718 33 1 6.3247 1.9180 1.2575 34 1 3.4037 3.6771 -1.2135 35 1 3.3627 3.6643 1.2190 36 1 4.4582 -1.3146 0.0079 37 1 3.6586 -3.3172 -0.0969 38 1 2.8324 -6.7221 -1.3322 39 1 3.9737 -5.3247 -1.5399 40 1 3.3418 -8.1701 0.7563 41 1 4.9355 -7.8651 0.0244 42 1 4.9619 -6.8631 2.6650 43 1 8.1999 -10.1171 3.1585 44 1 7.6774 -11.7862 3.4899 45 1 6.9017 -10.8529 2.1881 46 1 6.1918 -9.8174 6.2781 47 1 7.2628 -11.1815 5.8785 48 1 7.7853 -9.5125 5.5462 49 1 4.6644 -11.2813 3.2145 50 1 5.4404 -12.2144 4.5170 51 1 4.3687 -10.8506 4.9161 52 1 2.4551 -5.1152 1.9721 53 1 1.7617 -6.5748 1.1412 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_10803934.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:57:33 Heat of formation + Delta-G solvation = -72.165877 kcal Electronic energy + Delta-G solvation = -32993.259308 eV Core-core repulsion = 28447.570849 eV Total energy + Delta-G solvation = -4545.688460 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.69820 -41.84710 -41.09445 -39.45008 -38.28705 -37.58989 -35.98311 -35.08098 -34.50932 -33.78350 -31.11434 -29.02320 -28.39859 -28.38405 -28.31449 -26.73209 -25.78943 -24.77631 -23.62575 -22.84645 -21.39922 -21.18441 -20.67998 -20.14250 -19.13362 -18.77560 -18.20185 -17.73070 -17.36680 -17.32761 -16.97043 -16.78618 -16.41521 -15.91327 -15.88484 -15.58375 -15.53030 -15.33110 -15.13849 -14.97405 -14.76534 -14.48363 -14.46649 -14.16520 -13.93663 -13.71222 -13.50189 -13.37217 -13.35304 -13.23319 -13.20915 -12.97184 -12.92944 -12.87935 -12.47581 -12.46623 -12.36076 -12.02938 -11.95448 -11.69328 -11.41466 -11.32552 -11.25750 -11.12052 -10.28830 -10.24012 -10.17819 -9.76443 -9.40076 -4.91637 0.25357 1.17007 1.30166 1.42893 1.46187 1.72584 1.74472 2.04647 2.16988 2.18593 3.10774 3.40654 3.53646 3.57030 3.60467 3.70781 3.72805 3.73488 3.77986 3.81056 3.92490 3.93009 4.03425 4.19862 4.23516 4.32901 4.45674 4.52923 4.53778 4.58788 4.59625 4.60595 4.69409 4.71654 4.74792 4.76230 4.80009 4.82292 4.84783 4.86025 4.97486 5.04150 5.05393 5.09127 5.14685 5.24403 5.25445 5.34898 5.47675 5.57142 5.59276 5.76506 5.95841 6.37510 6.37889 7.02724 7.04734 7.32497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.414 5.414 3 C 0.007 3.993 4 C -0.181 4.181 5 C -0.039 4.039 6 O -0.566 6.566 7 Si 0.772 3.228 8 C -0.105 4.105 9 C -0.074 4.074 10 C 0.592 3.408 11 O -0.581 6.581 12 N -0.686 5.686 13 C 0.116 3.884 14 H 0.087 0.913 15 C -0.120 4.120 16 C -0.109 4.109 17 H 0.116 0.884 18 C 0.148 3.852 19 N -0.699 5.699 20 C 0.641 3.359 21 O -0.596 6.596 22 O -0.371 6.371 23 C 0.127 3.873 24 C -0.179 4.179 25 C -0.138 4.138 26 C -0.180 4.180 27 C -0.145 4.145 28 H 0.084 0.916 29 H 0.089 0.911 30 H 0.106 0.894 31 H 0.173 0.827 32 H 0.091 0.909 33 H 0.401 0.599 34 H -0.289 1.289 35 H -0.301 1.301 36 H 0.170 0.830 37 H 0.417 0.583 38 H 0.110 0.890 39 H 0.094 0.906 40 H 0.066 0.934 41 H 0.072 0.928 42 H 0.416 0.584 43 H 0.063 0.937 44 H 0.086 0.914 45 H 0.063 0.937 46 H 0.068 0.932 47 H 0.098 0.902 48 H 0.070 0.930 49 H 0.063 0.937 50 H 0.087 0.913 51 H 0.060 0.940 52 H 0.066 0.934 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.811 4.284 -0.565 7.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.086 5.086 3 C -0.129 4.129 4 C -0.188 4.188 5 C -0.150 4.150 6 O -0.376 6.376 7 Si 0.679 3.321 8 C -0.131 4.131 9 C -0.187 4.187 10 C 0.380 3.620 11 O -0.462 6.462 12 N -0.337 5.337 13 C 0.010 3.990 14 H 0.105 0.895 15 C -0.158 4.158 16 C -0.128 4.128 17 H 0.134 0.866 18 C 0.026 3.974 19 N -0.360 5.360 20 C 0.394 3.606 21 O -0.487 6.487 22 O -0.286 6.286 23 C 0.090 3.910 24 C -0.237 4.237 25 C -0.195 4.195 26 C -0.237 4.237 27 C -0.184 4.184 28 H 0.102 0.898 29 H 0.107 0.893 30 H 0.125 0.875 31 H 0.190 0.810 32 H 0.109 0.891 33 H 0.252 0.748 34 H -0.216 1.216 35 H -0.229 1.229 36 H 0.187 0.813 37 H 0.255 0.745 38 H 0.128 0.872 39 H 0.113 0.887 40 H 0.084 0.916 41 H 0.090 0.910 42 H 0.252 0.748 43 H 0.082 0.918 44 H 0.105 0.895 45 H 0.082 0.918 46 H 0.087 0.913 47 H 0.117 0.883 48 H 0.089 0.911 49 H 0.082 0.918 50 H 0.106 0.894 51 H 0.079 0.921 52 H 0.085 0.915 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 3.391 3.621 -0.724 5.014 hybrid contribution -0.209 -0.119 0.158 0.288 sum 3.182 3.502 -0.566 4.766 Atomic orbital electron populations 1.22395 0.74827 1.05674 1.04733 1.43974 1.07669 1.04749 1.52179 1.21966 0.90726 0.91808 1.08421 1.19181 0.92912 0.94766 1.11908 1.24071 0.92541 1.07358 0.91045 1.86442 1.41943 1.66800 1.42369 0.94321 0.85130 0.76728 0.75959 1.21468 0.94513 0.94609 1.02529 1.20205 0.90941 0.87620 1.19976 1.17058 0.85381 0.83973 0.75545 1.90790 1.17791 1.85284 1.52373 1.45181 1.09977 1.05031 1.73505 1.21880 0.99386 0.79593 0.98103 0.89511 1.23268 0.97433 0.99472 0.95676 1.22874 0.97274 0.94983 0.97665 0.86646 1.21421 0.97370 0.96955 0.81613 1.44756 1.62905 1.07606 1.20684 1.18388 0.77159 0.84558 0.80479 1.90905 1.62027 1.37059 1.58690 1.86312 1.72235 1.36999 1.33005 1.22351 0.94478 0.78044 0.96084 1.22468 0.98317 1.02633 1.00240 1.21890 1.01232 1.04456 0.91908 1.22476 0.97779 1.00196 1.03290 1.23577 0.97113 1.00095 0.97623 0.89783 0.89257 0.87547 0.81039 0.89112 0.74824 1.21641 1.22870 0.81282 0.74550 0.87197 0.88713 0.91577 0.90996 0.74754 0.91845 0.89474 0.91779 0.91310 0.88295 0.91105 0.91790 0.89440 0.92086 0.91516 0.88730 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.16 10.48 127.77 1.34 1.50 16 2 N -0.41 -2.59 3.16 -534.32 -1.69 -4.27 16 3 C 0.01 0.04 9.92 83.48 0.83 0.86 16 4 C -0.18 -0.74 5.47 -20.12 -0.11 -0.85 16 5 C -0.04 0.07 3.01 71.23 0.21 0.28 16 6 O -0.57 0.87 12.86 -148.98 -1.92 -1.05 16 7 Si 0.77 -2.53 30.59 68.60 2.10 -0.43 16 8 C -0.11 -0.32 10.29 22.57 0.23 -0.09 16 9 C -0.07 -0.46 6.89 40.35 0.28 -0.19 16 10 C 0.59 3.90 7.77 86.45 0.67 4.57 16 11 O -0.58 -7.67 14.44 -4.34 -0.06 -7.73 16 12 N -0.69 0.71 5.25 -443.99 -2.33 -1.62 16 13 C 0.12 -0.24 4.26 45.52 0.19 -0.05 16 14 H 0.09 0.21 7.57 -2.39 -0.02 0.19 16 15 C -0.12 0.89 7.38 31.12 0.23 1.12 16 16 C -0.11 0.78 3.64 -10.18 -0.04 0.74 16 17 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 18 C 0.15 -0.40 5.51 86.38 0.48 0.07 16 19 N -0.70 0.00 5.56 -590.84 -3.29 -3.29 16 20 C 0.64 4.44 8.06 129.79 1.05 5.49 16 21 O -0.60 -7.34 11.88 19.82 0.24 -7.10 16 22 O -0.37 -2.22 9.94 -55.50 -0.55 -2.77 16 23 C 0.13 0.44 1.13 -10.80 -0.01 0.42 16 24 C -0.18 -0.61 8.37 71.98 0.60 -0.01 16 25 C -0.14 0.22 8.85 71.98 0.64 0.86 16 26 C -0.18 -0.70 8.37 71.98 0.60 -0.10 16 27 C -0.15 0.49 7.45 31.21 0.23 0.72 16 28 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 29 H 0.09 0.53 6.55 -2.39 -0.02 0.51 16 30 H 0.11 -0.26 8.12 -2.39 -0.02 -0.28 16 31 H 0.17 0.35 6.19 -2.91 -0.02 0.33 16 32 H 0.09 -0.52 7.96 -2.39 -0.02 -0.54 16 33 H 0.40 -4.81 8.74 -74.06 -0.65 -5.46 16 34 H -0.29 -0.56 7.11 99.48 0.71 0.15 16 35 H -0.30 -1.37 7.11 99.48 0.71 -0.67 16 36 H 0.17 -0.47 7.45 -2.91 -0.02 -0.49 16 37 H 0.42 -2.65 7.60 -92.71 -0.70 -3.36 16 38 H 0.11 -0.89 8.10 -2.39 -0.02 -0.91 16 39 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 40 H 0.07 -0.04 7.85 -2.38 -0.02 -0.05 16 41 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 42 H 0.42 -1.70 8.58 -92.71 -0.80 -2.49 16 43 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 44 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 45 H 0.06 0.56 5.88 -2.39 -0.01 0.54 16 46 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 47 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 48 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 49 H 0.06 0.59 5.88 -2.39 -0.01 0.57 16 50 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 51 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 52 H 0.07 -0.07 8.14 -2.38 -0.02 -0.09 16 53 H 0.09 -0.26 7.91 -2.38 -0.02 -0.28 16 Total: 0.00 -26.58 426.84 -1.24 -27.81 By element: Atomic # 1 Polarization: -13.74 SS G_CDS: -1.16 Total: -14.91 kcal Atomic # 6 Polarization: 7.94 SS G_CDS: 7.43 Total: 15.36 kcal Atomic # 7 Polarization: -1.88 SS G_CDS: -7.30 Total: -9.18 kcal Atomic # 8 Polarization: -16.37 SS G_CDS: -2.29 Total: -18.66 kcal Atomic # 14 Polarization: -2.53 SS G_CDS: 2.10 Total: -0.43 kcal Total: -26.58 -1.24 -27.81 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_10803934.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.352 kcal (2) G-P(sol) polarization free energy of solvation -26.575 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds