Wall clock time and date at job start Sat Mar 6 2021 19:57:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.37653 * 125.68009 * 2 1 4 4 C 1.46682 * 126.22936 * 0.02562 * 3 2 1 5 5 O 1.21692 * 120.00293 * 4.98443 * 4 3 2 6 6 N 1.34778 * 119.99605 * 184.97849 * 4 3 2 7 7 C 1.46503 * 119.99856 * 185.08343 * 6 4 3 8 8 H 1.09000 * 112.84774 * 23.80403 * 7 6 4 9 9 C 1.53771 * 113.61463 * 155.00284 * 7 6 4 10 10 C 1.53776 * 87.08383 * 89.11546 * 9 7 6 11 11 H 1.08998 * 113.61742 * 270.80085 * 10 9 7 12 12 C 1.52999 * 113.61758 * 139.98065 * 10 9 7 13 13 N 1.46499 * 109.47327 * 175.00459 * 12 10 9 14 14 C 1.34777 * 120.00086 * 180.02562 * 13 12 10 15 15 O 1.21513 * 120.00143 * 359.97438 * 14 13 12 16 16 O 1.34636 * 120.00059 * 179.97438 * 14 13 12 17 17 C 1.45196 * 116.99970 * 179.97438 * 16 14 13 18 18 C 1.53001 * 109.47321 * 60.00291 * 17 16 14 19 19 C 1.53002 * 109.47059 * 180.02562 * 17 16 14 20 20 C 1.53007 * 109.47336 * 300.00114 * 17 16 14 21 21 C 1.53777 * 113.61248 * 252.50308 * 7 6 4 22 22 C 1.37868 * 107.53526 * 180.02562 * 3 2 1 23 23 C 1.39838 * 107.08480 * 359.97438 * 22 3 2 24 24 C 1.35453 * 107.86629 * 359.74043 * 23 22 3 25 25 C 1.50701 * 125.56665 * 180.25811 * 24 23 22 26 26 O 1.42896 * 109.47105 * 210.19793 * 25 24 23 27 27 Si 1.86303 * 109.46938 * 330.19712 * 25 24 23 28 28 H 1.08999 * 109.46915 * 85.12798 * 1 2 3 29 29 H 1.08996 * 109.47033 * 325.12793 * 1 2 3 30 30 H 1.09003 * 109.46921 * 205.13079 * 1 2 3 31 31 H 0.96993 * 120.00007 * 5.08294 * 6 4 3 32 32 H 1.09005 * 113.61297 * 203.66672 * 9 7 6 33 33 H 1.09000 * 113.61593 * 334.56189 * 9 7 6 34 34 H 1.09005 * 109.47144 * 294.99828 * 12 10 9 35 35 H 1.08998 * 109.47360 * 54.99650 * 12 10 9 36 36 H 0.97000 * 120.00274 * 359.97438 * 13 12 10 37 37 H 1.08998 * 109.47100 * 59.99763 * 18 17 16 38 38 H 1.08997 * 109.47351 * 179.97438 * 18 17 16 39 39 H 1.08995 * 109.46789 * 299.99753 * 18 17 16 40 40 H 1.09002 * 109.47267 * 60.00173 * 19 17 16 41 41 H 1.09005 * 109.46985 * 179.97438 * 19 17 16 42 42 H 1.08998 * 109.47181 * 300.00126 * 19 17 16 43 43 H 1.08995 * 109.46852 * 59.99587 * 20 17 16 44 44 H 1.09001 * 109.46708 * 180.02562 * 20 17 16 45 45 H 1.09002 * 109.47018 * 299.99845 * 20 17 16 46 46 H 1.09004 * 113.61972 * 25.42943 * 21 7 6 47 47 H 1.09004 * 113.61995 * 156.33655 * 21 7 6 48 48 H 1.08001 * 126.45475 * 180.02562 * 22 3 2 49 49 H 1.07999 * 126.06687 * 180.02562 * 23 22 3 50 50 H 1.09000 * 109.46480 * 90.19352 * 25 24 23 51 51 H 0.96697 * 114.00200 * 59.99611 * 26 25 24 52 52 H 1.48500 * 109.99510 * 179.97438 * 27 25 24 53 53 H 1.48497 * 109.99753 * 301.31671 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8124 2.5124 0.0005 5 8 0.6255 2.7648 0.0926 6 7 2.7085 3.5141 -0.1008 7 6 2.2667 4.9064 0.0115 8 1 1.3336 5.0109 0.5651 9 6 3.3719 5.8675 0.4798 10 6 3.7357 6.0467 -1.0036 11 1 4.4671 5.3236 -1.3643 12 6 4.0900 7.4872 -1.3780 13 7 4.5345 7.5339 -2.7732 14 6 4.9009 8.7078 -3.3248 15 8 4.8622 9.7275 -2.6651 16 8 5.3099 8.7506 -4.6068 17 6 5.6889 10.0490 -5.1348 18 6 6.8497 10.6144 -4.3140 19 6 6.1213 9.8994 -6.5948 20 6 4.4943 11.0016 -5.0523 21 6 2.2806 5.6667 -1.3251 22 6 3.5780 0.6888 -0.0006 23 6 3.5522 -0.7094 -0.0003 24 6 2.2555 -1.1010 0.0062 25 6 1.7709 -2.5279 0.0143 26 8 0.5126 -2.6074 -0.6583 27 14 3.0111 -3.6099 -0.8586 28 1 -0.3633 0.0873 -1.0240 29 1 -0.3633 0.8431 0.5875 30 1 -0.3633 -0.9304 0.4365 31 1 3.6459 3.3131 -0.2481 32 1 2.9915 6.7749 0.9488 33 1 4.1529 5.3826 1.0654 34 1 3.2117 8.1211 -1.2552 35 1 4.8898 7.8450 -0.7297 36 1 4.5658 6.7199 -3.2998 37 1 7.7006 9.9358 -4.3727 38 1 7.1344 11.5889 -4.7106 39 1 6.5411 10.7211 -3.2740 40 1 5.2941 9.4969 -7.1794 41 1 6.4054 10.8743 -6.9913 42 1 6.9722 9.2207 -6.6540 43 1 4.1858 11.1082 -4.0124 44 1 4.7788 11.9762 -5.4491 45 1 3.6674 10.5989 -5.6372 46 1 2.1807 5.0197 -2.1967 47 1 1.6019 6.5193 -1.3496 48 1 4.4584 1.3144 -0.0004 49 1 4.4132 -1.3612 -0.0003 50 1 1.6546 -2.8662 1.0439 51 1 0.5413 -2.3210 -1.5815 52 1 2.5450 -5.0199 -0.8569 53 1 3.2024 -3.1393 -2.2540 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_10803936.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:57:37 Heat of formation + Delta-G solvation = -74.473291 kcal Electronic energy + Delta-G solvation = -33021.333106 eV Core-core repulsion = 28475.544590 eV Total energy + Delta-G solvation = -4545.788517 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.60665 -41.84009 -41.07565 -39.43733 -38.28115 -37.88521 -35.96646 -35.04762 -34.40509 -33.56677 -31.37031 -29.10082 -28.38179 -28.31342 -27.50601 -26.83622 -26.70007 -24.31869 -23.26799 -22.84288 -21.62938 -21.20945 -20.53405 -20.18770 -19.12146 -18.90956 -18.24072 -17.69311 -17.32499 -17.20460 -16.98956 -16.45685 -16.25337 -16.14277 -15.78435 -15.71983 -15.44068 -15.33838 -15.11696 -14.80999 -14.75518 -14.47582 -14.41726 -14.24724 -13.91859 -13.74567 -13.48195 -13.36870 -13.31476 -13.22399 -12.97379 -12.94743 -12.92637 -12.87606 -12.46874 -12.42005 -12.35532 -12.00331 -11.96558 -11.65560 -11.41008 -11.31187 -11.24382 -11.11247 -10.85725 -10.23973 -10.14413 -9.74426 -9.09768 -4.86785 0.35739 1.17652 1.17942 1.55099 1.73721 1.75269 1.76103 2.02157 2.30038 2.33635 3.11767 3.18074 3.44011 3.57211 3.58767 3.70160 3.73237 3.76093 3.78284 3.84567 3.93257 3.95960 4.25080 4.26016 4.36394 4.47097 4.49684 4.54581 4.55060 4.59792 4.60857 4.65767 4.71819 4.75059 4.78056 4.81406 4.85131 4.85787 4.86291 4.99047 5.06117 5.09737 5.10773 5.16761 5.19808 5.25562 5.25869 5.35911 5.55343 5.59696 5.74427 5.99585 6.13043 6.31472 6.38867 6.48221 7.12433 7.33483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.408 5.408 3 C -0.086 4.086 4 C 0.587 3.413 5 O -0.589 6.589 6 N -0.685 5.685 7 C 0.115 3.885 8 H 0.083 0.917 9 C -0.121 4.121 10 C -0.108 4.108 11 H 0.119 0.881 12 C 0.148 3.852 13 N -0.699 5.699 14 C 0.640 3.360 15 O -0.596 6.596 16 O -0.371 6.371 17 C 0.127 3.873 18 C -0.179 4.179 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.146 4.146 22 C -0.122 4.122 23 C -0.202 4.202 24 C 0.007 3.993 25 C -0.068 4.068 26 O -0.549 6.549 27 Si 0.816 3.184 28 H 0.073 0.927 29 H 0.077 0.923 30 H 0.102 0.898 31 H 0.418 0.582 32 H 0.107 0.893 33 H 0.096 0.904 34 H 0.064 0.936 35 H 0.072 0.928 36 H 0.416 0.584 37 H 0.063 0.937 38 H 0.086 0.914 39 H 0.063 0.937 40 H 0.068 0.932 41 H 0.098 0.902 42 H 0.070 0.930 43 H 0.063 0.937 44 H 0.086 0.914 45 H 0.060 0.940 46 H 0.067 0.933 47 H 0.091 0.909 48 H 0.178 0.822 49 H 0.185 0.815 50 H 0.132 0.868 51 H 0.385 0.615 52 H -0.299 1.299 53 H -0.291 1.291 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.727 -2.659 -0.795 7.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.082 5.082 3 C -0.199 4.199 4 C 0.377 3.623 5 O -0.471 6.471 6 N -0.337 5.337 7 C 0.010 3.990 8 H 0.101 0.899 9 C -0.159 4.159 10 C -0.126 4.126 11 H 0.137 0.863 12 C 0.026 3.974 13 N -0.359 5.359 14 C 0.394 3.606 15 O -0.487 6.487 16 O -0.285 6.285 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.238 4.238 21 C -0.184 4.184 22 C -0.149 4.149 23 C -0.225 4.225 24 C -0.111 4.111 25 C -0.176 4.176 26 O -0.356 6.356 27 Si 0.719 3.281 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.121 0.879 31 H 0.256 0.744 32 H 0.125 0.875 33 H 0.114 0.886 34 H 0.083 0.917 35 H 0.090 0.910 36 H 0.253 0.747 37 H 0.082 0.918 38 H 0.105 0.895 39 H 0.082 0.918 40 H 0.087 0.913 41 H 0.117 0.883 42 H 0.089 0.911 43 H 0.082 0.918 44 H 0.105 0.895 45 H 0.079 0.921 46 H 0.086 0.914 47 H 0.110 0.890 48 H 0.195 0.805 49 H 0.202 0.798 50 H 0.149 0.851 51 H 0.234 0.766 52 H -0.226 1.226 53 H -0.217 1.217 Dipole moment (debyes) X Y Z Total from point charges 5.437 -2.621 -0.523 6.059 hybrid contribution -1.136 0.310 -0.910 1.489 sum 4.301 -2.311 -1.433 5.088 Atomic orbital electron populations 1.22239 0.76099 1.04860 1.03763 1.43905 1.07014 1.04751 1.52493 1.20211 0.91615 0.87111 1.20970 1.17241 0.85255 0.84415 0.75393 1.90791 1.18041 1.85434 1.52799 1.45142 1.11433 1.04404 1.72690 1.21841 0.99184 0.79833 0.98143 0.89883 1.23273 0.97797 0.99468 0.95394 1.22825 0.97161 0.95172 0.97470 0.86334 1.21428 0.99775 0.97350 0.78862 1.44748 1.69061 1.07647 1.14422 1.18400 0.76742 0.84666 0.80820 1.90909 1.60092 1.34071 1.63658 1.86307 1.78424 1.37670 1.26108 1.22346 0.94923 0.78784 0.94890 1.22466 0.97233 1.02408 1.01549 1.21892 1.02484 1.04399 0.90702 1.22477 0.97583 1.00169 1.03523 1.23527 0.96985 1.00333 0.97579 1.21739 0.94236 0.95831 1.03056 1.21025 0.95346 0.95630 1.10496 1.21499 0.91630 0.89206 1.08755 1.25262 0.93453 0.94263 1.04601 1.86560 1.30543 1.88830 1.29688 0.93326 0.82836 0.73230 0.78712 0.90805 0.90396 0.87922 0.74374 0.87502 0.88553 0.91749 0.91007 0.74709 0.91822 0.89517 0.91766 0.91306 0.88340 0.91081 0.91809 0.89476 0.92085 0.91430 0.89015 0.80497 0.79816 0.85061 0.76577 1.22633 1.21742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.30 9.48 127.77 1.21 1.51 16 2 N -0.41 -1.67 3.16 -519.69 -1.64 -3.31 16 3 C -0.09 -0.29 6.89 40.35 0.28 -0.02 16 4 C 0.59 3.14 7.77 86.45 0.67 3.81 16 5 O -0.59 -7.85 14.40 -4.32 -0.06 -7.91 16 6 N -0.69 1.81 5.24 -444.01 -2.33 -0.52 16 7 C 0.12 -0.32 4.29 45.51 0.20 -0.13 16 8 H 0.08 0.21 7.53 -2.39 -0.02 0.19 16 9 C -0.12 0.98 7.39 31.12 0.23 1.21 16 10 C -0.11 0.89 3.63 -10.27 -0.04 0.85 16 11 H 0.12 -1.36 8.14 -2.39 -0.02 -1.38 16 12 C 0.15 -0.51 5.51 86.38 0.48 -0.03 16 13 N -0.70 0.61 5.56 -590.85 -3.29 -2.67 16 14 C 0.64 4.02 8.06 129.79 1.05 5.06 16 15 O -0.60 -7.06 11.88 19.80 0.24 -6.83 16 16 O -0.37 -1.97 9.94 -55.45 -0.55 -2.52 16 17 C 0.13 0.37 1.13 -10.79 -0.01 0.36 16 18 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 19 C -0.14 0.29 8.85 71.98 0.64 0.92 16 20 C -0.18 -0.64 8.37 71.98 0.60 -0.03 16 21 C -0.15 0.61 7.43 31.12 0.23 0.84 16 22 C -0.12 0.34 10.35 22.57 0.23 0.57 16 23 C -0.20 0.70 9.37 22.01 0.21 0.90 16 24 C 0.01 0.00 6.15 41.34 0.25 0.25 16 25 C -0.07 0.17 2.88 71.24 0.20 0.38 16 26 O -0.55 -0.14 10.24 -148.98 -1.53 -1.67 16 27 Si 0.82 -3.97 31.09 68.60 2.13 -1.83 16 28 H 0.07 0.24 8.14 -2.39 -0.02 0.22 16 29 H 0.08 0.63 6.50 -2.39 -0.02 0.62 16 30 H 0.10 0.26 6.45 -2.39 -0.02 0.24 16 31 H 0.42 -3.74 7.64 -92.71 -0.71 -4.45 16 32 H 0.11 -0.89 8.10 -2.38 -0.02 -0.91 16 33 H 0.10 -1.00 8.14 -2.39 -0.02 -1.02 16 34 H 0.06 -0.06 7.84 -2.38 -0.02 -0.08 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 36 H 0.42 -2.18 8.58 -92.71 -0.80 -2.98 16 37 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 39 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 40 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 41 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 42 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 43 H 0.06 0.56 5.88 -2.39 -0.01 0.55 16 44 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 45 H 0.06 0.18 8.14 -2.39 -0.02 0.17 16 46 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 47 H 0.09 -0.29 7.90 -2.38 -0.02 -0.30 16 48 H 0.18 -1.78 7.49 -2.91 -0.02 -1.80 16 49 H 0.18 -1.92 6.85 -2.91 -0.02 -1.94 16 50 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 51 H 0.38 -1.50 8.70 -74.06 -0.64 -2.14 16 52 H -0.30 -0.74 7.11 99.48 0.71 -0.03 16 53 H -0.29 -0.21 7.11 99.48 0.71 0.50 16 Total: 0.00 -25.41 422.63 -1.16 -26.56 By element: Atomic # 1 Polarization: -14.68 SS G_CDS: -1.16 Total: -15.84 kcal Atomic # 6 Polarization: 9.50 SS G_CDS: 7.03 Total: 16.53 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -7.25 Total: -6.50 kcal Atomic # 8 Polarization: -17.02 SS G_CDS: -1.90 Total: -18.92 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: 2.13 Total: -1.83 kcal Total: -25.41 -1.16 -26.56 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_10803936.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.911 kcal (2) G-P(sol) polarization free energy of solvation -25.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.473 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds