Wall clock time and date at job start Sat Mar 6 2021 19:57:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53001 * 109.47123 * 2 1 4 4 C 1.52995 * 109.47350 * 239.99976 * 2 1 3 5 5 O 1.45199 * 109.47302 * 119.99821 * 2 1 3 6 6 C 1.34635 * 117.00020 * 60.00178 * 5 2 1 7 7 O 1.21511 * 120.00009 * 0.02562 * 6 5 2 8 8 N 1.34782 * 120.00208 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00004 * 180.02562 * 8 6 5 10 10 C 1.53001 * 109.46984 * 179.97438 * 9 8 6 11 11 H 1.09003 * 112.84534 * 43.80449 * 10 9 8 12 12 C 1.53786 * 113.61405 * 174.99694 * 10 9 8 13 13 C 1.53779 * 87.07879 * 139.98080 * 12 10 9 14 14 H 1.09000 * 113.61285 * 219.93005 * 13 12 10 15 15 N 1.46500 * 113.61012 * 89.12009 * 13 12 10 16 16 C 1.34781 * 119.99877 * 154.99896 * 15 13 12 17 17 O 1.21573 * 119.99740 * 359.97438 * 16 15 13 18 18 C 1.47686 * 120.00054 * 179.97438 * 16 15 13 19 19 C 1.39823 * 120.16832 * 179.97438 * 18 16 15 20 20 F 1.35104 * 120.10949 * 0.02562 * 19 18 16 21 21 C 1.38322 * 119.78444 * 180.29799 * 19 18 16 22 22 C 1.38209 * 120.10967 * 359.44286 * 21 19 18 23 23 C 1.38455 * 120.34124 * 0.56169 * 22 21 19 24 24 C 1.50707 * 119.89118 * 179.74291 * 23 22 21 25 25 O 1.42896 * 109.47179 * 119.97378 * 24 23 22 26 26 Si 1.86305 * 109.46788 * 359.97349 * 24 23 22 27 27 C 1.37851 * 120.22025 * 359.71537 * 23 22 21 28 28 C 1.53772 * 113.61729 * 272.49429 * 10 9 8 29 29 H 1.09004 * 109.47109 * 299.99888 * 1 2 3 30 30 H 1.08995 * 109.47481 * 60.00189 * 1 2 3 31 31 H 1.09000 * 109.46933 * 180.02562 * 1 2 3 32 32 H 1.08996 * 109.47428 * 180.02562 * 3 2 1 33 33 H 1.08999 * 109.47227 * 299.99995 * 3 2 1 34 34 H 1.09004 * 109.47036 * 60.00068 * 3 2 1 35 35 H 1.09005 * 109.47450 * 299.99944 * 4 2 1 36 36 H 1.09008 * 109.47025 * 59.99856 * 4 2 1 37 37 H 1.09001 * 109.47582 * 179.97438 * 4 2 1 38 38 H 0.97004 * 119.99640 * 359.97438 * 8 6 5 39 39 H 1.08994 * 109.47246 * 59.99875 * 9 8 6 40 40 H 1.09002 * 109.46704 * 299.99897 * 9 8 6 41 41 H 1.09002 * 113.61088 * 25.42963 * 12 10 9 42 42 H 1.09000 * 113.61368 * 254.53084 * 12 10 9 43 43 H 0.96998 * 120.00551 * 334.99022 * 15 13 12 44 44 H 1.08001 * 119.94622 * 179.72542 * 21 19 18 45 45 H 1.08007 * 119.82573 * 180.28127 * 22 21 19 46 46 H 1.09004 * 109.46749 * 239.97945 * 24 23 22 47 47 H 0.96702 * 114.00040 * 179.97438 * 25 24 23 48 48 H 1.48493 * 109.99866 * 60.00702 * 26 24 23 49 49 H 1.48499 * 109.99504 * 181.32197 * 26 24 23 50 50 H 1.08003 * 120.06452 * 179.97438 * 27 23 22 51 51 H 1.09002 * 113.61538 * 105.46997 * 28 10 9 52 52 H 1.09005 * 113.61609 * 334.56968 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9723 1.3384 7 8 0.9517 -2.5097 0.5036 8 7 2.0681 -2.6657 2.4167 9 6 1.6750 -4.0671 2.5827 10 6 2.2761 -4.6154 3.8784 11 1 2.1818 -3.9229 4.7149 12 6 1.8233 -6.0472 4.2100 13 6 3.2686 -6.3156 4.6614 14 1 3.6412 -7.2981 4.3717 15 7 3.5085 -6.0100 6.0740 16 6 4.5047 -6.6294 6.7377 17 8 5.2039 -7.4420 6.1642 18 6 4.7469 -6.3211 8.1615 19 6 5.7790 -6.9620 8.8536 20 9 6.5595 -7.8659 8.2219 21 6 5.9949 -6.6717 10.1887 22 6 5.2004 -5.7426 10.8335 23 6 4.1769 -5.1051 10.1529 24 6 3.3130 -4.0980 10.8676 25 8 3.4239 -2.8297 10.2188 26 14 3.8754 -3.9418 12.6368 27 6 3.9459 -5.3880 8.8237 28 6 3.6930 -5.1875 3.7065 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 3.1299 1.4426 -0.0005 33 1 1.6766 1.9564 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6767 -1.7490 -1.2492 36 1 1.6766 -0.2074 -2.1392 37 1 3.1300 -0.7208 -1.2495 38 1 2.6283 -2.2369 3.0825 39 1 2.0414 -4.6498 1.7376 40 1 0.5881 -4.1366 2.6279 41 1 1.5248 -6.6244 3.3349 42 1 1.0961 -6.0985 5.0204 43 1 2.9505 -5.3619 6.5316 44 1 6.7886 -7.1684 10.7269 45 1 5.3759 -5.5161 11.8748 46 1 2.2746 -4.4286 10.8442 47 1 2.8928 -2.1317 10.6261 48 1 5.2897 -3.4917 12.6823 49 1 3.0113 -2.9753 13.3609 50 1 3.1466 -4.8896 8.2954 51 1 4.4754 -4.5448 4.1103 52 1 3.9059 -5.5297 2.6937 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_12335834.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:57:54 Heat of formation + Delta-G solvation = -137.209047 kcal Electronic energy + Delta-G solvation = -34898.909617 eV Core-core repulsion = 29973.684087 eV Total energy + Delta-G solvation = -4925.225530 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.183 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -50.01649 -41.89584 -41.57970 -40.44651 -39.42385 -38.30240 -37.58541 -35.98079 -35.04849 -34.35357 -32.62399 -32.26854 -29.06585 -28.39262 -28.32601 -26.73951 -26.60341 -25.70841 -24.28602 -23.15029 -22.78265 -21.64642 -21.25900 -20.31811 -19.15711 -19.15577 -18.59671 -18.28186 -17.75863 -17.68717 -17.34046 -17.01475 -16.86270 -16.41691 -16.36146 -16.02171 -15.89833 -15.71022 -15.65553 -15.63128 -15.27545 -14.84484 -14.63905 -14.48160 -14.45839 -14.05965 -13.91468 -13.81236 -13.53261 -13.38224 -13.33312 -13.22966 -12.98928 -12.93905 -12.89025 -12.75070 -12.48223 -12.45383 -12.36878 -12.03433 -11.84491 -11.68439 -11.42403 -11.33340 -11.19742 -11.12581 -10.53300 -10.42394 -10.23555 -10.10422 -9.79228 -4.88882 -0.50810 -0.02657 1.15965 1.30565 1.58182 1.63956 1.73683 1.89583 2.00220 2.44696 3.04448 3.09742 3.25946 3.38660 3.40504 3.55852 3.57696 3.71319 3.72198 3.73461 3.77093 3.81216 3.92052 4.03155 4.13925 4.22409 4.36210 4.45252 4.51767 4.58532 4.59153 4.59263 4.68651 4.73858 4.75352 4.76677 4.77922 4.80613 4.83982 4.85068 4.86495 4.93600 4.96913 5.03275 5.08196 5.13163 5.16469 5.23434 5.24589 5.34171 5.52425 5.57726 5.58934 6.33972 6.36819 6.61444 7.03523 7.31681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.699 5.699 9 C 0.148 3.852 10 C -0.108 4.108 11 H 0.117 0.883 12 C -0.120 4.120 13 C 0.110 3.890 14 H 0.085 0.915 15 N -0.690 5.690 16 C 0.557 3.443 17 O -0.571 6.571 18 C -0.189 4.189 19 C 0.132 3.868 20 F -0.136 7.136 21 C -0.152 4.152 22 C -0.054 4.054 23 C -0.096 4.096 24 C -0.077 4.077 25 O -0.555 6.555 26 Si 0.753 3.247 27 C -0.024 4.024 28 C -0.147 4.147 29 H 0.063 0.937 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.068 0.932 33 H 0.098 0.902 34 H 0.070 0.930 35 H 0.063 0.937 36 H 0.087 0.913 37 H 0.060 0.940 38 H 0.416 0.584 39 H 0.065 0.935 40 H 0.072 0.928 41 H 0.108 0.892 42 H 0.096 0.904 43 H 0.415 0.585 44 H 0.168 0.832 45 H 0.165 0.835 46 H 0.111 0.889 47 H 0.399 0.601 48 H -0.297 1.297 49 H -0.288 1.288 50 H 0.161 0.839 51 H 0.067 0.933 52 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.958 3.956 7.025 9.464 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.286 6.286 6 C 0.394 3.606 7 O -0.486 6.486 8 N -0.359 5.359 9 C 0.026 3.974 10 C -0.127 4.127 11 H 0.135 0.865 12 C -0.158 4.158 13 C 0.005 3.995 14 H 0.103 0.897 15 N -0.342 5.342 16 C 0.346 3.654 17 O -0.450 6.450 18 C -0.193 4.193 19 C 0.112 3.888 20 F -0.115 7.115 21 C -0.171 4.171 22 C -0.071 4.071 23 C -0.096 4.096 24 C -0.186 4.186 25 O -0.366 6.366 26 Si 0.659 3.341 27 C -0.042 4.042 28 C -0.185 4.185 29 H 0.082 0.918 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.117 0.883 34 H 0.089 0.911 35 H 0.082 0.918 36 H 0.106 0.894 37 H 0.079 0.921 38 H 0.252 0.748 39 H 0.083 0.917 40 H 0.091 0.909 41 H 0.126 0.874 42 H 0.115 0.885 43 H 0.254 0.746 44 H 0.185 0.815 45 H 0.182 0.818 46 H 0.129 0.871 47 H 0.250 0.750 48 H -0.225 1.225 49 H -0.215 1.215 50 H 0.179 0.821 51 H 0.086 0.914 52 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -4.113 3.340 6.347 8.268 hybrid contribution 0.060 1.147 -0.440 1.230 sum -4.053 4.487 5.907 8.453 Atomic orbital electron populations 1.22467 0.93915 1.03722 1.03551 1.22343 0.94551 0.92542 0.81486 1.21893 1.02388 0.90935 1.04283 1.22478 1.01555 1.02280 0.97453 1.86308 1.71590 1.23423 1.47253 1.18391 0.78840 0.80778 0.82592 1.90908 1.42396 1.71019 1.44315 1.44755 1.55154 1.12885 1.23148 1.21423 1.00124 0.78062 0.97774 1.22826 0.95495 0.97285 0.97079 0.86464 1.23270 0.94745 0.94724 1.03067 1.21895 0.98315 0.99275 0.80045 0.89719 1.45395 1.33468 1.44096 1.11260 1.18286 0.80446 0.80384 0.86320 1.90845 1.48528 1.35746 1.69921 1.20043 1.00840 1.04075 0.94353 1.18198 0.89884 0.88979 0.91756 1.91560 1.72690 1.64564 1.82637 1.21360 1.03100 1.00896 0.91713 1.21337 0.91768 0.93181 1.00853 1.19503 0.97506 0.98216 0.94384 1.24856 1.03165 0.84024 1.06523 1.86525 1.73012 1.19938 1.57080 0.94274 0.76675 0.89090 0.74033 1.21188 0.96902 0.92264 0.93854 1.23538 0.97103 0.97614 1.00264 0.91839 0.89481 0.91753 0.91318 0.88309 0.91099 0.91786 0.89446 0.92096 0.74759 0.91674 0.90925 0.87359 0.88547 0.74582 0.81454 0.81828 0.87132 0.75024 1.22458 1.21547 0.82114 0.91426 0.88844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 2 C 0.13 0.41 1.13 -10.80 -0.01 0.40 16 3 C -0.14 0.25 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.69 8.37 71.98 0.60 -0.08 16 5 O -0.37 -2.13 9.94 -55.45 -0.55 -2.68 16 6 C 0.64 4.25 8.06 129.79 1.05 5.30 16 7 O -0.60 -7.19 11.88 19.81 0.24 -6.95 16 8 N -0.70 0.26 5.56 -590.85 -3.29 -3.02 16 9 C 0.15 -0.44 5.51 86.38 0.48 0.03 16 10 C -0.11 0.82 3.63 -10.27 -0.04 0.78 16 11 H 0.12 -1.27 8.14 -2.39 -0.02 -1.29 16 12 C -0.12 0.90 7.39 31.12 0.23 1.13 16 13 C 0.11 -0.19 4.32 45.51 0.20 0.01 16 14 H 0.08 0.32 7.46 -2.39 -0.02 0.30 16 15 N -0.69 1.12 5.21 -443.07 -2.31 -1.18 16 16 C 0.56 3.81 7.77 86.74 0.67 4.48 16 17 O -0.57 -9.49 14.94 -3.94 -0.06 -9.55 16 18 C -0.19 -0.65 5.88 -20.05 -0.12 -0.77 16 19 C 0.13 0.76 7.29 22.67 0.17 0.93 16 20 F -0.14 -1.72 15.55 44.97 0.70 -1.02 16 21 C -0.15 0.17 10.02 22.28 0.22 0.40 16 22 C -0.05 0.25 8.66 22.31 0.19 0.44 16 23 C -0.10 0.42 5.42 -19.90 -0.11 0.31 16 24 C -0.08 0.62 2.81 71.24 0.20 0.82 16 25 O -0.56 3.11 12.74 -148.98 -1.90 1.21 16 26 Si 0.75 -5.73 29.78 68.60 2.04 -3.68 16 27 C -0.02 0.08 9.09 22.52 0.20 0.28 16 28 C -0.15 0.48 7.43 31.11 0.23 0.71 16 29 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 31 H 0.06 0.54 5.88 -2.39 -0.01 0.53 16 32 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 34 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.06 0.58 5.88 -2.38 -0.01 0.57 16 36 H 0.09 0.02 8.14 -2.38 -0.02 0.00 16 37 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 38 H 0.42 -1.90 8.58 -92.71 -0.80 -2.70 16 39 H 0.06 -0.03 7.84 -2.39 -0.02 -0.05 16 40 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 41 H 0.11 -0.86 8.10 -2.39 -0.02 -0.88 16 42 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.42 -3.46 6.73 -92.71 -0.62 -4.08 16 44 H 0.17 -0.91 8.06 -2.91 -0.02 -0.93 16 45 H 0.16 -1.59 4.86 -2.91 -0.01 -1.60 16 46 H 0.11 -1.46 7.96 -2.38 -0.02 -1.48 16 47 H 0.40 -5.11 8.74 -74.06 -0.65 -5.75 16 48 H -0.30 -0.01 7.11 99.48 0.71 0.70 16 49 H -0.29 0.70 7.11 99.48 0.71 1.41 16 50 H 0.16 -1.46 6.41 -2.91 -0.02 -1.48 16 51 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 52 H 0.09 -0.22 7.90 -2.38 -0.02 -0.24 16 Total: 0.00 -28.82 423.77 -0.76 -29.58 By element: Atomic # 1 Polarization: -17.75 SS G_CDS: -1.05 Total: -18.80 kcal Atomic # 6 Polarization: 10.68 SS G_CDS: 5.41 Total: 16.09 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -5.59 Total: -4.21 kcal Atomic # 8 Polarization: -15.69 SS G_CDS: -2.27 Total: -17.97 kcal Atomic # 9 Polarization: -1.72 SS G_CDS: 0.70 Total: -1.02 kcal Atomic # 14 Polarization: -5.73 SS G_CDS: 2.04 Total: -3.68 kcal Total: -28.82 -0.76 -29.58 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_12335834.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.628 kcal (2) G-P(sol) polarization free energy of solvation -28.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.763 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.581 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.209 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds