Wall clock time and date at job start Sat Mar 6 2021 19:58:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52996 * 109.47329 * 2 1 4 4 C 1.53000 * 109.46736 * 240.00224 * 2 1 3 5 5 O 1.45195 * 109.47240 * 120.00464 * 2 1 3 6 6 C 1.34647 * 117.00145 * 59.99541 * 5 2 1 7 7 O 1.21514 * 119.99636 * 0.02562 * 6 5 2 8 8 N 1.34775 * 119.99767 * 180.02562 * 6 5 2 9 9 C 1.46504 * 119.99212 * 179.97438 * 8 6 5 10 10 C 1.53006 * 109.46929 * 180.02562 * 9 8 6 11 11 H 1.09003 * 112.84435 * 316.20258 * 10 9 8 12 12 C 1.53783 * 113.61332 * 87.49987 * 10 9 8 13 13 C 1.53783 * 87.07593 * 139.98423 * 12 10 9 14 14 H 1.09003 * 113.68746 * 220.00863 * 13 12 10 15 15 N 1.46499 * 113.61254 * 89.12213 * 13 12 10 16 16 C 1.34777 * 120.00199 * 107.50239 * 15 13 12 17 17 O 1.21553 * 119.99924 * 359.97438 * 16 15 13 18 18 C 1.47850 * 119.99831 * 180.27510 * 16 15 13 19 19 C 1.39540 * 120.13976 * 359.71988 * 18 16 15 20 20 C 1.38077 * 119.84134 * 180.02562 * 19 18 16 21 21 Br 1.89103 * 119.93778 * 179.97438 * 20 19 18 22 22 C 1.38420 * 120.12439 * 0.02562 * 20 19 18 23 23 C 1.38371 * 120.28331 * 0.02562 * 22 20 19 24 24 C 1.50703 * 119.92182 * 180.02562 * 23 22 20 25 25 O 1.42898 * 109.47054 * 119.99415 * 24 23 22 26 26 Si 1.86296 * 109.46912 * 359.97438 * 24 23 22 27 27 C 1.37943 * 120.15282 * 359.71308 * 23 22 20 28 28 C 1.53770 * 113.61621 * 185.00340 * 10 9 8 29 29 H 1.09000 * 109.46698 * 299.99672 * 1 2 3 30 30 H 1.09000 * 109.47345 * 59.99672 * 1 2 3 31 31 H 1.08994 * 109.47525 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.46865 * 180.02562 * 3 2 1 33 33 H 1.08992 * 109.47596 * 299.99953 * 3 2 1 34 34 H 1.09000 * 109.46963 * 60.00489 * 3 2 1 35 35 H 1.09002 * 109.47218 * 299.99750 * 4 2 1 36 36 H 1.09001 * 109.47417 * 60.00419 * 4 2 1 37 37 H 1.09001 * 109.46991 * 180.02562 * 4 2 1 38 38 H 0.96993 * 120.00326 * 0.02562 * 8 6 5 39 39 H 1.09000 * 109.47375 * 60.00590 * 9 8 6 40 40 H 1.08996 * 109.47589 * 299.99837 * 9 8 6 41 41 H 1.08995 * 113.61226 * 25.43960 * 12 10 9 42 42 H 1.08996 * 113.61645 * 254.53302 * 12 10 9 43 43 H 0.97001 * 120.00074 * 287.49342 * 15 13 12 44 44 H 1.07994 * 120.08242 * 0.02562 * 19 18 16 45 45 H 1.07997 * 119.85863 * 179.97438 * 22 20 19 46 46 H 1.08998 * 109.46704 * 239.99581 * 24 23 22 47 47 H 0.96701 * 113.99983 * 179.97438 * 25 24 23 48 48 H 1.48497 * 110.00414 * 60.00058 * 26 24 23 49 49 H 1.48505 * 109.99694 * 181.31938 * 26 24 23 50 50 H 1.08001 * 120.06122 * 180.28584 * 27 23 22 51 51 H 1.08997 * 113.61786 * 105.47024 * 28 10 9 52 52 H 1.08995 * 113.61505 * 334.56487 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1854 6 6 1.6522 -1.9725 1.3382 7 8 0.9515 -2.5097 0.5034 8 7 2.0672 -2.6656 2.4170 9 6 1.6729 -4.0667 2.5834 10 6 2.2721 -4.6145 3.8803 11 1 3.3130 -4.3233 4.0217 12 6 1.3898 -4.3735 5.1165 13 6 1.7792 -5.7895 5.5729 14 1 0.9552 -6.3489 6.0159 15 7 2.9966 -5.8296 6.3869 16 6 2.9145 -6.0679 7.7109 17 8 1.8302 -6.2491 8.2297 18 6 4.1426 -6.1024 8.5333 19 6 5.3887 -5.8943 7.9408 20 6 6.5317 -5.9283 8.7147 21 35 8.2219 -5.6475 7.9144 22 6 6.4428 -6.1687 10.0749 23 6 5.2099 -6.3767 10.6677 24 6 5.1226 -6.6371 12.1494 25 8 4.3256 -5.6233 12.7651 26 14 6.8337 -6.6152 12.8857 27 6 4.0601 -6.3399 9.9065 28 6 2.0188 -6.1167 4.0896 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 3.1300 1.4423 -0.0005 33 1 1.6768 1.9563 -0.8899 34 1 1.6768 1.9562 0.8900 35 1 1.6766 -1.7489 -1.2493 36 1 1.6766 -0.2073 -2.1393 37 1 3.1299 -0.7216 -1.2491 38 1 2.6262 -2.2366 3.0835 39 1 2.0394 -4.6501 1.7387 40 1 0.5861 -4.1355 2.6283 41 1 0.3306 -4.2660 4.8826 42 1 1.7617 -3.5858 5.7716 43 1 3.8618 -5.6848 5.9729 44 1 5.4590 -5.7071 6.8795 45 1 7.3397 -6.1948 10.6761 46 1 4.6661 -7.6120 12.3206 47 1 4.2258 -5.7279 13.7212 48 1 7.4674 -5.2915 12.6589 49 1 6.7641 -6.9023 14.3411 50 1 3.0982 -6.4979 10.3714 51 1 2.8986 -6.7363 3.9157 52 1 1.1317 -6.4857 3.5750 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_12335870.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:30 Heat of formation + Delta-G solvation = -89.465417 kcal Electronic energy + Delta-G solvation = -34054.089511 eV Core-core repulsion = 29260.570273 eV Total energy + Delta-G solvation = -4793.519238 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.103 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -41.91233 -41.68776 -40.61218 -39.42101 -38.28937 -37.81097 -35.97464 -35.05411 -34.40700 -33.66517 -32.84237 -30.46849 -29.10288 -28.38390 -28.31717 -27.03594 -26.71539 -25.70739 -23.99973 -22.87188 -22.67774 -21.69999 -21.24030 -20.31289 -19.13532 -18.93804 -18.64577 -17.77920 -17.62490 -17.36066 -17.32349 -16.73776 -16.30243 -16.27461 -16.21912 -15.78425 -15.71750 -15.46062 -15.35169 -14.92914 -14.87363 -14.83152 -14.48455 -14.28495 -14.02716 -13.90674 -13.64955 -13.47110 -13.37163 -13.23881 -12.97671 -12.92907 -12.87915 -12.83668 -12.47499 -12.42169 -12.35792 -12.03984 -12.00495 -11.87430 -11.66599 -11.49034 -11.41199 -11.31087 -11.18725 -11.11366 -10.65423 -10.35016 -10.21298 -10.07369 -9.89097 -4.98816 -0.52192 -0.15518 0.42538 1.17436 1.19386 1.50522 1.55449 1.75085 1.87867 1.93797 2.44054 3.11406 3.13781 3.36043 3.43835 3.56724 3.58199 3.72228 3.73117 3.78007 3.79855 3.82507 3.87873 3.93017 3.98489 4.16435 4.24709 4.28592 4.46717 4.49632 4.54839 4.59521 4.60620 4.70500 4.74769 4.75510 4.78255 4.80928 4.83896 4.85317 4.86031 4.93072 4.98779 5.05427 5.08118 5.10844 5.15147 5.24516 5.25438 5.34850 5.37043 5.54583 5.59363 6.35329 6.38553 6.52116 7.03111 7.33240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.640 3.360 7 O -0.596 6.596 8 N -0.699 5.699 9 C 0.148 3.852 10 C -0.110 4.110 11 H 0.118 0.882 12 C -0.146 4.146 13 C 0.111 3.889 14 H 0.088 0.912 15 N -0.692 5.692 16 C 0.564 3.436 17 O -0.571 6.571 18 C -0.137 4.137 19 C -0.043 4.043 20 C -0.099 4.099 21 Br -0.026 7.026 22 C -0.063 4.063 23 C -0.079 4.079 24 C -0.087 4.087 25 O -0.557 6.557 26 Si 0.757 3.243 27 C -0.030 4.030 28 C -0.121 4.121 29 H 0.060 0.940 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.070 0.930 33 H 0.098 0.902 34 H 0.068 0.932 35 H 0.063 0.937 36 H 0.086 0.914 37 H 0.062 0.938 38 H 0.416 0.584 39 H 0.071 0.929 40 H 0.065 0.935 41 H 0.093 0.907 42 H 0.069 0.931 43 H 0.415 0.585 44 H 0.166 0.834 45 H 0.154 0.846 46 H 0.103 0.897 47 H 0.399 0.601 48 H -0.291 1.291 49 H -0.279 1.279 50 H 0.131 0.869 51 H 0.095 0.905 52 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.529 -1.510 -0.442 5.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.026 3.974 10 C -0.129 4.129 11 H 0.136 0.864 12 C -0.185 4.185 13 C 0.006 3.994 14 H 0.106 0.894 15 N -0.343 5.343 16 C 0.352 3.648 17 O -0.451 6.451 18 C -0.141 4.141 19 C -0.063 4.063 20 C -0.178 4.178 21 Br 0.060 6.940 22 C -0.082 4.082 23 C -0.080 4.080 24 C -0.196 4.196 25 O -0.368 6.368 26 Si 0.661 3.339 27 C -0.050 4.050 28 C -0.160 4.160 29 H 0.079 0.921 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.117 0.883 34 H 0.087 0.913 35 H 0.082 0.918 36 H 0.105 0.895 37 H 0.081 0.919 38 H 0.253 0.747 39 H 0.089 0.911 40 H 0.083 0.917 41 H 0.111 0.889 42 H 0.088 0.912 43 H 0.254 0.746 44 H 0.183 0.817 45 H 0.171 0.829 46 H 0.121 0.879 47 H 0.250 0.750 48 H -0.218 1.218 49 H -0.206 1.206 50 H 0.149 0.851 51 H 0.114 0.886 52 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 5.539 -1.157 -0.902 5.730 hybrid contribution -1.029 0.680 1.181 1.707 sum 4.510 -0.477 0.279 4.544 Atomic orbital electron populations 1.22472 0.94149 1.03665 1.03449 1.22339 0.94389 0.92595 0.81607 1.21889 1.02484 0.90923 1.04189 1.22469 1.01666 1.02239 0.97281 1.86309 1.71559 1.23412 1.47246 1.18404 0.78827 0.80775 0.82630 1.90909 1.42328 1.71028 1.44432 1.44747 1.55241 1.12978 1.22918 1.21428 0.99774 0.78103 0.98106 1.22846 1.00912 0.96838 0.92261 0.86408 1.23537 1.00963 0.96893 0.97071 1.21898 0.87644 0.98150 0.91725 0.89421 1.45446 1.10721 1.71429 1.06735 1.18286 0.88127 0.75758 0.82656 1.90802 1.30347 1.51017 1.72976 1.19860 0.92908 1.06908 0.94379 1.21463 0.89249 0.94551 1.01087 1.21703 0.92888 1.08059 0.95192 1.96854 1.20390 1.95539 1.81241 1.21324 0.97942 0.95279 0.93686 1.19360 0.92481 1.01301 0.94872 1.25028 1.08139 0.94315 0.92086 1.86540 1.71575 1.51122 1.27534 0.94301 0.75796 0.84169 0.79656 1.21254 0.99168 0.92383 0.92166 1.23273 1.04696 0.95192 0.92811 0.92066 0.89486 0.91792 0.91117 0.88345 0.91290 0.91761 0.89517 0.91861 0.74724 0.91056 0.91675 0.88854 0.91236 0.74610 0.81670 0.82872 0.87921 0.75049 1.21829 1.20583 0.85101 0.88623 0.87415 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.65 8.37 71.98 0.60 -0.04 16 2 C 0.13 0.39 1.13 -10.80 -0.01 0.38 16 3 C -0.14 0.26 8.85 71.98 0.64 0.90 16 4 C -0.18 -0.56 8.37 71.98 0.60 0.04 16 5 O -0.37 -2.00 9.94 -55.56 -0.55 -2.55 16 6 C 0.64 4.02 8.06 129.79 1.05 5.06 16 7 O -0.60 -7.04 11.88 19.80 0.24 -6.80 16 8 N -0.70 0.66 5.56 -590.82 -3.29 -2.62 16 9 C 0.15 -0.54 5.51 86.38 0.48 -0.06 16 10 C -0.11 0.94 3.63 -10.27 -0.04 0.90 16 11 H 0.12 -1.40 8.14 -2.39 -0.02 -1.42 16 12 C -0.15 0.70 7.43 31.12 0.23 0.93 16 13 C 0.11 -0.39 4.32 45.52 0.20 -0.20 16 14 H 0.09 0.13 7.46 -2.39 -0.02 0.11 16 15 N -0.69 2.59 5.21 -442.90 -2.31 0.28 16 16 C 0.56 2.12 7.77 86.79 0.67 2.80 16 17 O -0.57 -7.25 15.95 -3.88 -0.06 -7.31 16 18 C -0.14 -0.19 5.87 -20.09 -0.12 -0.30 16 19 C -0.04 0.15 9.28 22.55 0.21 0.36 16 20 C -0.10 0.20 6.22 22.27 0.14 0.34 16 21 Br -0.03 0.07 33.69 -20.37 -0.69 -0.61 16 22 C -0.06 0.08 8.41 22.34 0.19 0.27 16 23 C -0.08 -0.06 5.42 -19.90 -0.11 -0.17 16 24 C -0.09 0.16 2.81 71.24 0.20 0.36 16 25 O -0.56 -0.83 12.74 -148.98 -1.90 -2.73 16 26 Si 0.76 -2.74 29.78 68.60 2.04 -0.70 16 27 C -0.03 -0.11 9.15 22.53 0.21 0.10 16 28 C -0.12 1.04 7.39 31.12 0.23 1.27 16 29 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 30 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 31 H 0.06 0.57 5.88 -2.39 -0.01 0.55 16 32 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 34 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 36 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 37 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 38 H 0.42 -2.19 8.58 -92.71 -0.80 -2.99 16 39 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 40 H 0.06 -0.08 7.84 -2.39 -0.02 -0.10 16 41 H 0.09 -0.35 7.89 -2.39 -0.02 -0.37 16 42 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 43 H 0.42 -4.17 6.74 -92.71 -0.62 -4.80 16 44 H 0.17 -1.64 6.40 -2.91 -0.02 -1.66 16 45 H 0.15 -0.66 4.86 -2.91 -0.01 -0.68 16 46 H 0.10 -0.59 7.96 -2.39 -0.02 -0.61 16 47 H 0.40 -2.62 8.74 -74.06 -0.65 -3.26 16 48 H -0.29 -0.93 7.11 99.48 0.71 -0.22 16 49 H -0.28 -0.12 7.11 99.48 0.71 0.58 16 50 H 0.13 0.84 7.65 -2.91 -0.02 0.82 16 51 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 52 H 0.11 -0.95 8.10 -2.39 -0.02 -0.97 16 Total: 0.00 -24.49 440.52 -2.19 -26.68 By element: Atomic # 1 Polarization: -15.54 SS G_CDS: -1.04 Total: -16.58 kcal Atomic # 6 Polarization: 7.58 SS G_CDS: 5.36 Total: 12.95 kcal Atomic # 7 Polarization: 3.25 SS G_CDS: -5.59 Total: -2.35 kcal Atomic # 8 Polarization: -17.11 SS G_CDS: -2.28 Total: -19.39 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.04 Total: -0.70 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.61 kcal Total: -24.49 -2.19 -26.68 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_12335870.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.781 kcal (2) G-P(sol) polarization free energy of solvation -24.490 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.271 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds