Wall clock time and date at job start Sat Mar 6 2021 19:58:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.52999 * 109.46862 * 2 1 4 4 C 1.52999 * 109.47430 * 240.00173 * 2 1 3 5 5 O 1.45200 * 109.47072 * 120.00079 * 2 1 3 6 6 C 1.34630 * 117.00010 * 60.00086 * 5 2 1 7 7 O 1.21513 * 120.00193 * 0.02562 * 6 5 2 8 8 N 1.34781 * 119.99811 * 179.97438 * 6 5 2 9 9 C 1.46503 * 119.99797 * 180.02562 * 8 6 5 10 10 C 1.52998 * 109.47115 * 179.97438 * 9 8 6 11 11 H 1.09001 * 112.85185 * 316.19960 * 10 9 8 12 12 C 1.53789 * 113.61159 * 87.50290 * 10 9 8 13 13 C 1.53781 * 87.07894 * 139.97949 * 12 10 9 14 14 H 1.09002 * 113.69145 * 220.00882 * 13 12 10 15 15 N 1.46500 * 113.61070 * 89.11741 * 13 12 10 16 16 C 1.34780 * 119.99929 * 107.49933 * 15 13 12 17 17 O 1.21569 * 119.99917 * 0.02562 * 16 15 13 18 18 C 1.47700 * 120.00201 * 179.97438 * 16 15 13 19 19 C 1.39796 * 120.15490 * 180.02562 * 18 16 15 20 20 F 1.35100 * 120.08866 * 0.02562 * 19 18 16 21 21 C 1.38315 * 119.83174 * 180.02562 * 19 18 16 22 22 C 1.38189 * 120.14500 * 0.02562 * 21 19 18 23 23 C 1.50699 * 119.84394 * 180.02562 * 22 21 19 24 24 O 1.42898 * 109.47283 * 14.99863 * 23 22 21 25 25 Si 1.86299 * 109.47288 * 135.00123 * 23 22 21 26 26 C 1.38652 * 120.31348 * 359.97438 * 22 21 19 27 27 F 1.35101 * 119.91866 * 179.97438 * 26 22 21 28 28 C 1.38074 * 120.16965 * 0.02562 * 26 22 21 29 29 C 1.53778 * 87.08306 * 334.56865 * 13 12 10 30 30 H 1.08992 * 109.47122 * 299.99738 * 1 2 3 31 31 H 1.09001 * 109.46788 * 60.00322 * 1 2 3 32 32 H 1.08998 * 109.46578 * 179.97438 * 1 2 3 33 33 H 1.09001 * 109.47197 * 180.02562 * 3 2 1 34 34 H 1.08999 * 109.47505 * 300.00137 * 3 2 1 35 35 H 1.09006 * 109.47088 * 60.00076 * 3 2 1 36 36 H 1.09000 * 109.47246 * 300.00114 * 4 2 1 37 37 H 1.08999 * 109.46806 * 59.99943 * 4 2 1 38 38 H 1.09001 * 109.47269 * 179.97438 * 4 2 1 39 39 H 0.96991 * 120.00351 * 359.97438 * 8 6 5 40 40 H 1.09002 * 109.46909 * 60.00256 * 9 8 6 41 41 H 1.08990 * 109.47030 * 300.00083 * 9 8 6 42 42 H 1.09005 * 113.61174 * 25.43758 * 12 10 9 43 43 H 1.08995 * 113.61464 * 254.52840 * 12 10 9 44 44 H 0.96998 * 120.00355 * 287.50038 * 15 13 12 45 45 H 1.07998 * 119.92737 * 179.72330 * 21 19 18 46 46 H 1.09001 * 109.46851 * 254.99950 * 23 22 21 47 47 H 0.96696 * 114.00370 * 59.99575 * 24 23 22 48 48 H 1.48502 * 109.99695 * 180.02562 * 25 23 22 49 49 H 1.48496 * 109.99859 * 301.31632 * 25 23 22 50 50 H 1.07996 * 120.07863 * 180.02562 * 28 26 22 51 51 H 1.09007 * 113.61139 * 139.97845 * 29 13 12 52 52 H 1.08997 * 113.61346 * 270.79393 * 29 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9517 -2.5097 0.5035 8 7 2.0681 -2.6657 2.4166 9 6 1.6750 -4.0672 2.5826 10 6 2.2760 -4.6155 3.8783 11 1 3.3169 -4.3239 4.0187 12 6 1.3949 -4.3759 5.1157 13 6 1.7856 -5.7920 5.5707 14 1 0.9624 -6.3522 6.0142 15 7 3.0039 -5.8320 6.3832 16 6 2.9235 -6.0711 7.7072 17 8 1.8399 -6.2542 8.2270 18 6 4.1518 -6.1120 8.5263 19 6 4.0721 -6.3604 9.8997 20 9 2.8705 -6.5644 10.4825 21 6 5.2267 -6.3967 10.6605 22 6 6.4564 -6.1876 10.0659 23 6 7.7101 -6.2292 10.9012 24 8 7.4212 -6.8322 12.1641 25 14 9.0113 -7.2289 10.0189 26 6 6.5425 -5.9408 8.7042 27 9 7.7489 -5.7370 8.1313 28 6 5.3983 -5.9017 7.9325 29 6 2.0237 -6.1180 4.0869 30 1 -0.3633 0.5138 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3632 -1.0277 -0.0005 33 1 3.1300 1.4426 -0.0005 34 1 1.6766 1.9564 -0.8899 35 1 1.6766 1.9563 0.8900 36 1 1.6768 -1.7489 -1.2493 37 1 1.6768 -0.2073 -2.1392 38 1 3.1301 -0.7208 -1.2494 39 1 2.6283 -2.2371 3.0824 40 1 2.0415 -4.6498 1.7374 41 1 0.5882 -4.1367 2.6278 42 1 0.3353 -4.2689 4.8831 43 1 1.7671 -3.5885 5.7710 44 1 3.8686 -5.6863 5.9684 45 1 5.1665 -6.5840 11.7224 46 1 8.0759 -5.2145 11.0582 47 1 7.0903 -7.7385 12.1008 48 1 10.2524 -7.2780 10.8328 49 1 8.5125 -8.6054 9.7706 50 1 5.4670 -5.7097 6.8719 51 1 2.9037 -6.7370 3.9116 52 1 1.1365 -6.4886 3.5735 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_12360598.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:43 Heat of formation + Delta-G solvation = -179.388285 kcal Electronic energy + Delta-G solvation = -37288.564666 eV Core-core repulsion = 31892.056132 eV Total energy + Delta-G solvation = -5396.508534 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.174 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -50.29107 -50.11728 -41.86674 -41.56889 -40.42876 -39.49092 -38.28127 -37.76706 -35.95582 -35.03060 -34.36121 -32.82233 -31.42862 -29.18497 -28.36929 -28.29938 -27.83757 -26.69200 -24.69293 -24.20420 -23.63311 -22.83104 -22.07018 -21.23428 -20.32923 -19.58821 -19.16567 -18.98990 -18.50954 -17.89542 -17.70016 -17.41141 -17.32461 -17.28887 -16.82494 -16.67046 -16.34134 -16.09354 -15.98191 -15.85518 -15.72801 -15.66007 -15.64465 -15.33617 -15.03381 -14.81459 -14.53540 -14.45584 -14.10986 -13.90465 -13.81467 -13.48140 -13.35476 -13.28773 -13.20461 -12.98660 -12.95754 -12.91236 -12.86094 -12.64791 -12.45477 -12.34084 -12.09339 -11.98802 -11.64683 -11.39465 -11.29892 -11.29191 -11.11790 -11.09469 -10.30926 -10.20002 -10.12218 -9.74303 -4.80851 -0.78053 -0.27178 1.09869 1.19461 1.46335 1.56314 1.77261 1.83204 1.90795 2.28685 2.76856 2.83514 3.11029 3.13568 3.16394 3.43012 3.46092 3.53448 3.59881 3.74566 3.76151 3.79681 3.82666 3.85098 3.94657 4.22602 4.27681 4.36070 4.42439 4.49176 4.56030 4.60426 4.61105 4.63766 4.72964 4.74974 4.76401 4.76472 4.80299 4.83193 4.86969 4.87245 4.87778 5.01144 5.07580 5.11565 5.16309 5.26337 5.26978 5.36991 5.40941 5.55492 5.61544 6.33886 6.34430 6.41311 7.02490 7.35746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.370 6.370 6 C 0.640 3.360 7 O -0.597 6.597 8 N -0.698 5.698 9 C 0.147 3.853 10 C -0.108 4.108 11 H 0.123 0.877 12 C -0.146 4.146 13 C 0.111 3.889 14 H 0.084 0.916 15 N -0.686 5.686 16 C 0.560 3.440 17 O -0.566 6.566 18 C -0.159 4.159 19 C 0.135 3.865 20 F -0.130 7.130 21 C -0.128 4.128 22 C -0.089 4.089 23 C -0.081 4.081 24 O -0.542 6.542 25 Si 0.749 3.251 26 C 0.086 3.914 27 F -0.090 7.090 28 C -0.064 4.064 29 C -0.122 4.122 30 H 0.060 0.940 31 H 0.086 0.914 32 H 0.063 0.937 33 H 0.071 0.929 34 H 0.097 0.903 35 H 0.068 0.932 36 H 0.063 0.937 37 H 0.085 0.915 38 H 0.063 0.937 39 H 0.417 0.583 40 H 0.071 0.929 41 H 0.063 0.937 42 H 0.090 0.910 43 H 0.072 0.928 44 H 0.418 0.582 45 H 0.165 0.835 46 H 0.148 0.852 47 H 0.390 0.610 48 H -0.289 1.289 49 H -0.283 1.283 50 H 0.192 0.808 51 H 0.097 0.903 52 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.297 2.270 -4.110 7.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.393 3.607 7 O -0.488 6.488 8 N -0.358 5.358 9 C 0.025 3.975 10 C -0.127 4.127 11 H 0.141 0.859 12 C -0.185 4.185 13 C 0.005 3.995 14 H 0.102 0.898 15 N -0.339 5.339 16 C 0.348 3.652 17 O -0.445 6.445 18 C -0.163 4.163 19 C 0.114 3.886 20 F -0.109 7.109 21 C -0.147 4.147 22 C -0.091 4.091 23 C -0.189 4.189 24 O -0.350 6.350 25 Si 0.652 3.348 26 C 0.066 3.934 27 F -0.069 7.069 28 C -0.083 4.083 29 C -0.160 4.160 30 H 0.079 0.921 31 H 0.105 0.895 32 H 0.082 0.918 33 H 0.090 0.910 34 H 0.116 0.884 35 H 0.087 0.913 36 H 0.082 0.918 37 H 0.104 0.896 38 H 0.082 0.918 39 H 0.254 0.746 40 H 0.089 0.911 41 H 0.081 0.919 42 H 0.109 0.891 43 H 0.090 0.910 44 H 0.258 0.742 45 H 0.182 0.818 46 H 0.165 0.835 47 H 0.240 0.760 48 H -0.217 1.217 49 H -0.210 1.210 50 H 0.209 0.791 51 H 0.116 0.884 52 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 5.871 1.817 -3.982 7.323 hybrid contribution -0.628 -0.512 1.189 1.439 sum 5.243 1.305 -2.793 6.082 Atomic orbital electron populations 1.22476 0.94219 1.03643 1.03432 1.22334 0.94333 0.92610 0.81620 1.21890 1.02522 0.90900 1.04172 1.22468 1.01707 1.02224 0.97268 1.86304 1.71535 1.23407 1.47201 1.18415 0.78831 0.80777 0.82647 1.90912 1.42381 1.71043 1.44475 1.44733 1.55176 1.12924 1.22973 1.21428 0.99715 0.78122 0.98227 1.22857 1.01096 0.96638 0.92082 0.85899 1.23536 1.00923 0.96844 0.97157 1.21893 0.87573 0.98250 0.91743 0.89768 1.45360 1.10853 1.71344 1.06337 1.18084 0.87784 0.76433 0.82942 1.90877 1.30342 1.50426 1.72836 1.19801 0.94639 1.09356 0.92485 1.17985 0.81180 0.98845 0.90580 1.91587 1.43539 1.91540 1.84202 1.20857 0.88937 1.02692 1.02199 1.20510 0.96568 0.98598 0.93412 1.25195 0.99025 1.06626 0.88090 1.86594 1.87153 1.33744 1.27556 0.93969 0.75838 0.78499 0.86511 1.17081 0.81550 1.04690 0.90042 1.91242 1.40439 1.91543 1.83645 1.21364 0.87919 0.96531 1.02493 1.23274 1.04720 0.95351 0.92654 0.92052 0.89545 0.91818 0.91045 0.88417 0.91270 0.91771 0.89593 0.91783 0.74618 0.91080 0.91877 0.89109 0.90952 0.74232 0.81799 0.83487 0.75966 1.21683 1.20960 0.79091 0.88402 0.87682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.53 8.37 71.98 0.60 0.07 16 2 C 0.13 0.28 1.13 -10.79 -0.01 0.27 16 3 C -0.14 0.38 8.85 71.98 0.64 1.02 16 4 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 5 O -0.37 -1.60 9.94 -55.39 -0.55 -2.15 16 6 C 0.64 3.32 8.06 129.79 1.05 4.37 16 7 O -0.60 -6.57 11.88 19.80 0.24 -6.33 16 8 N -0.70 1.66 5.56 -590.86 -3.29 -1.63 16 9 C 0.15 -0.73 5.51 86.38 0.48 -0.25 16 10 C -0.11 1.13 3.63 -10.27 -0.04 1.09 16 11 H 0.12 -1.80 8.14 -2.39 -0.02 -1.82 16 12 C -0.15 0.92 7.43 31.12 0.23 1.16 16 13 C 0.11 -0.55 4.32 45.52 0.20 -0.35 16 14 H 0.08 0.08 7.46 -2.39 -0.02 0.06 16 15 N -0.69 4.16 5.21 -443.04 -2.31 1.85 16 16 C 0.56 1.36 7.77 86.74 0.67 2.04 16 17 O -0.57 -7.30 14.94 -3.93 -0.06 -7.36 16 18 C -0.16 0.16 5.88 -20.06 -0.12 0.05 16 19 C 0.13 0.39 7.28 22.67 0.17 0.55 16 20 F -0.13 -1.31 15.55 44.97 0.70 -0.61 16 21 C -0.13 0.20 9.20 22.28 0.20 0.40 16 22 C -0.09 0.40 5.14 -19.78 -0.10 0.30 16 23 C -0.08 0.38 2.96 71.24 0.21 0.59 16 24 O -0.54 1.02 11.63 -148.98 -1.73 -0.71 16 25 Si 0.75 -2.81 29.56 68.60 2.03 -0.78 16 26 C 0.09 -0.62 6.65 22.33 0.15 -0.47 16 27 F -0.09 0.85 13.69 44.97 0.62 1.47 16 28 C -0.06 0.55 9.52 22.57 0.21 0.77 16 29 C -0.12 1.23 7.39 31.12 0.23 1.46 16 30 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 31 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 32 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 33 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 34 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 35 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 36 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 37 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 38 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 39 H 0.42 -2.96 8.58 -92.71 -0.80 -3.75 16 40 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 41 H 0.06 -0.13 7.84 -2.39 -0.02 -0.15 16 42 H 0.09 -0.42 7.90 -2.38 -0.02 -0.44 16 43 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 44 H 0.42 -5.79 6.73 -92.71 -0.62 -6.42 16 45 H 0.16 -0.47 7.07 -2.91 -0.02 -0.49 16 46 H 0.15 -1.03 7.96 -2.39 -0.02 -1.05 16 47 H 0.39 -2.92 8.43 -74.06 -0.62 -3.55 16 48 H -0.29 -1.01 7.11 99.48 0.71 -0.30 16 49 H -0.28 -0.31 7.11 99.48 0.71 0.39 16 50 H 0.19 -3.27 6.40 -2.91 -0.02 -3.29 16 51 H 0.10 -1.25 8.14 -2.38 -0.02 -1.26 16 52 H 0.10 -1.02 8.10 -2.39 -0.02 -1.04 16 Total: 0.00 -26.81 427.43 0.01 -26.80 By element: Atomic # 1 Polarization: -22.78 SS G_CDS: -1.01 Total: -23.79 kcal Atomic # 6 Polarization: 7.86 SS G_CDS: 5.37 Total: 13.23 kcal Atomic # 7 Polarization: 5.82 SS G_CDS: -5.59 Total: 0.23 kcal Atomic # 8 Polarization: -14.44 SS G_CDS: -2.11 Total: -16.55 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 1.31 Total: 0.86 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.03 Total: -0.78 kcal Total: -26.81 0.01 -26.80 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_12360598.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.585 kcal (2) G-P(sol) polarization free energy of solvation -26.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.008 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.803 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.388 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds