Wall clock time and date at job start Sat Mar 6 2021 19:58:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52998 * 109.47236 * 2 1 4 4 C 1.53003 * 109.47266 * 240.00096 * 2 1 3 5 5 O 1.45201 * 109.47353 * 120.00067 * 2 1 3 6 6 C 1.34638 * 116.99696 * 59.99960 * 5 2 1 7 7 O 1.21508 * 119.99959 * 0.02562 * 6 5 2 8 8 N 1.34780 * 119.99650 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99499 * 179.97438 * 8 6 5 10 10 C 1.53002 * 109.46924 * 179.97438 * 9 8 6 11 11 H 1.09000 * 112.84890 * 316.19917 * 10 9 8 12 12 C 1.53782 * 113.68736 * 87.46417 * 10 9 8 13 13 C 1.53787 * 87.07899 * 139.99562 * 12 10 9 14 14 H 1.09000 * 113.68581 * 220.00857 * 13 12 10 15 15 N 1.46494 * 113.61675 * 89.11743 * 13 12 10 16 16 C 1.34775 * 120.00361 * 107.49953 * 15 13 12 17 17 O 1.21570 * 119.99868 * 0.02562 * 16 15 13 18 18 C 1.47730 * 120.00345 * 179.97438 * 16 15 13 19 19 C 1.39635 * 120.11789 * 180.20661 * 18 16 15 20 20 C 1.37846 * 119.87614 * 180.27596 * 19 18 16 21 21 C 1.50707 * 119.94170 * 179.77217 * 20 19 18 22 22 O 1.42903 * 109.46442 * 14.72651 * 21 20 19 23 23 Si 1.86293 * 109.47256 * 134.72218 * 21 20 19 24 24 C 1.38639 * 120.12362 * 359.49677 * 20 19 18 25 25 F 1.35095 * 119.88514 * 180.24970 * 24 20 19 26 26 C 1.38674 * 120.23083 * 0.27623 * 24 20 19 27 27 C 1.37816 * 120.12409 * 359.97438 * 26 24 20 28 28 C 1.53777 * 113.61708 * 185.00232 * 10 9 8 29 29 H 1.09000 * 109.47186 * 299.99993 * 1 2 3 30 30 H 1.08996 * 109.47289 * 59.99848 * 1 2 3 31 31 H 1.09004 * 109.47059 * 179.97438 * 1 2 3 32 32 H 1.09003 * 109.47464 * 180.02562 * 3 2 1 33 33 H 1.09006 * 109.47118 * 300.00309 * 3 2 1 34 34 H 1.09000 * 109.47027 * 59.99910 * 3 2 1 35 35 H 1.08995 * 109.47028 * 299.99998 * 4 2 1 36 36 H 1.09006 * 109.46879 * 59.99819 * 4 2 1 37 37 H 1.09003 * 109.47165 * 179.97438 * 4 2 1 38 38 H 0.96995 * 119.99855 * 359.97438 * 8 6 5 39 39 H 1.09008 * 109.47238 * 60.00551 * 9 8 6 40 40 H 1.08995 * 109.47412 * 300.00003 * 9 8 6 41 41 H 1.08999 * 113.61526 * 25.44800 * 12 10 9 42 42 H 1.09004 * 113.61579 * 254.54019 * 12 10 9 43 43 H 0.97008 * 119.99818 * 287.50555 * 15 13 12 44 44 H 1.08002 * 120.05894 * 0.02968 * 19 18 16 45 45 H 1.08999 * 109.47345 * 254.72721 * 21 20 19 46 46 H 0.96700 * 114.00311 * 60.00230 * 22 21 20 47 47 H 1.48501 * 109.99918 * 58.68485 * 23 21 20 48 48 H 1.48506 * 109.99973 * 180.02562 * 23 21 20 49 49 H 1.08001 * 119.93377 * 179.97438 * 26 24 20 50 50 H 1.07999 * 120.06048 * 180.02562 * 27 26 24 51 51 H 1.08998 * 113.62080 * 105.38945 * 28 10 9 52 52 H 1.09000 * 113.68952 * 334.49029 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9516 -2.5096 0.5035 8 7 2.0673 -2.6654 2.4171 9 6 1.6732 -4.0666 2.5835 10 6 2.2734 -4.6147 3.8798 11 1 3.3144 -4.3236 4.0204 12 6 1.3938 -4.3740 5.1180 13 6 1.7839 -5.7903 5.5730 14 1 0.9608 -6.3497 6.0176 15 7 3.0031 -5.8311 6.3842 16 6 2.9240 -6.0699 7.7083 17 8 1.8408 -6.2519 8.2294 18 6 4.1535 -6.1116 8.5262 19 6 4.0746 -6.3631 9.8975 20 6 5.2245 -6.3953 10.6569 21 6 5.1407 -6.6615 12.1379 22 8 3.8473 -7.1792 12.4562 23 14 6.4426 -7.9035 12.6204 24 6 6.4586 -6.1889 10.0599 25 9 7.5830 -6.2265 10.8079 26 6 6.5430 -5.9435 8.6977 27 6 5.3992 -5.9040 7.9299 28 6 2.0202 -6.1169 4.0890 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4425 -0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 1.6767 -1.7489 -1.2493 36 1 1.6766 -0.2074 -2.1393 37 1 3.1301 -0.7208 -1.2495 38 1 2.6269 -2.2366 3.0832 39 1 2.0397 -4.6499 1.7388 40 1 0.5863 -4.1354 2.6284 41 1 0.3342 -4.2662 4.8866 42 1 1.7675 -3.5867 5.7728 43 1 3.8675 -5.6862 5.9683 44 1 3.1140 -6.5281 10.3628 45 1 5.3046 -5.7325 12.6839 46 1 3.6330 -8.0071 12.0049 47 1 7.7902 -7.3905 12.2653 48 1 6.3700 -8.1751 14.0786 49 1 7.5068 -5.7829 8.2376 50 1 5.4661 -5.7132 6.8690 51 1 2.8994 -6.7367 3.9130 52 1 1.1321 -6.4869 3.5767 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_12496548.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:51 Heat of formation + Delta-G solvation = -130.136095 kcal Electronic energy + Delta-G solvation = -34461.541609 eV Core-core repulsion = 29536.622786 eV Total energy + Delta-G solvation = -4924.918823 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.183 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -50.41458 -41.87259 -41.58924 -40.42041 -39.28334 -38.27180 -37.69440 -35.95083 -35.01238 -34.26825 -32.61732 -31.88126 -29.05030 -28.37820 -28.31021 -27.13879 -26.68029 -25.37735 -23.95127 -23.24543 -22.84077 -21.73167 -21.22792 -20.29402 -19.30720 -19.13936 -18.79518 -17.95717 -17.74745 -17.65739 -17.31333 -17.13667 -16.98380 -16.36888 -16.15238 -16.08650 -15.80595 -15.73328 -15.69305 -15.39170 -15.13237 -14.96991 -14.83323 -14.70473 -14.47274 -14.03553 -13.89964 -13.71152 -13.51617 -13.36500 -13.34825 -13.20819 -12.95872 -12.92201 -12.87247 -12.76213 -12.46172 -12.35496 -12.34632 -11.99154 -11.63121 -11.44054 -11.40380 -11.27640 -11.16769 -11.10252 -10.91574 -10.23898 -10.16551 -10.01198 -9.69789 -5.04658 -0.49925 0.03924 1.18529 1.20849 1.59446 1.62138 1.76169 1.93618 2.00645 2.59724 3.00614 3.12912 3.25604 3.34331 3.46675 3.59310 3.61088 3.70368 3.73579 3.77519 3.78658 3.86995 3.93598 4.00955 4.10028 4.27548 4.35276 4.48510 4.54480 4.60076 4.60342 4.62554 4.73526 4.75409 4.80572 4.80928 4.82801 4.86555 4.86764 4.87823 4.91668 5.01088 5.03956 5.08020 5.10375 5.12727 5.18991 5.25948 5.26341 5.36617 5.57012 5.60468 5.63944 6.39949 6.45500 6.60726 7.13372 7.34512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.370 6.370 6 C 0.640 3.360 7 O -0.596 6.596 8 N -0.698 5.698 9 C 0.147 3.853 10 C -0.109 4.109 11 H 0.120 0.880 12 C -0.147 4.147 13 C 0.112 3.888 14 H 0.086 0.914 15 N -0.691 5.691 16 C 0.562 3.438 17 O -0.575 6.575 18 C -0.150 4.150 19 C -0.029 4.029 20 C -0.158 4.158 21 C -0.071 4.071 22 O -0.551 6.551 23 Si 0.762 3.238 24 C 0.104 3.896 25 F -0.131 7.131 26 C -0.145 4.145 27 C -0.043 4.043 28 C -0.122 4.122 29 H 0.060 0.940 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.070 0.930 33 H 0.097 0.903 34 H 0.068 0.932 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.063 0.937 38 H 0.417 0.583 39 H 0.071 0.929 40 H 0.063 0.937 41 H 0.090 0.910 42 H 0.070 0.930 43 H 0.417 0.583 44 H 0.142 0.858 45 H 0.114 0.886 46 H 0.397 0.603 47 H -0.255 1.255 48 H -0.305 1.305 49 H 0.171 0.829 50 H 0.176 0.824 51 H 0.097 0.903 52 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.017 -0.406 -4.932 7.047 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.393 3.607 7 O -0.487 6.487 8 N -0.358 5.358 9 C 0.025 3.975 10 C -0.127 4.127 11 H 0.138 0.862 12 C -0.186 4.186 13 C 0.007 3.993 14 H 0.104 0.896 15 N -0.343 5.343 16 C 0.351 3.649 17 O -0.455 6.455 18 C -0.153 4.153 19 C -0.048 4.048 20 C -0.159 4.159 21 C -0.181 4.181 22 O -0.359 6.359 23 Si 0.666 3.334 24 C 0.085 3.915 25 F -0.110 7.110 26 C -0.164 4.164 27 C -0.061 4.061 28 C -0.160 4.160 29 H 0.079 0.921 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.089 0.911 33 H 0.116 0.884 34 H 0.087 0.913 35 H 0.082 0.918 36 H 0.104 0.896 37 H 0.082 0.918 38 H 0.253 0.747 39 H 0.089 0.911 40 H 0.082 0.918 41 H 0.109 0.891 42 H 0.088 0.912 43 H 0.256 0.744 44 H 0.160 0.840 45 H 0.131 0.869 46 H 0.247 0.753 47 H -0.180 1.180 48 H -0.233 1.233 49 H 0.188 0.812 50 H 0.193 0.807 51 H 0.115 0.885 52 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 4.620 -0.364 -4.182 6.243 hybrid contribution 0.234 0.927 0.505 1.081 sum 4.855 0.564 -3.678 6.117 Atomic orbital electron populations 1.22475 0.94184 1.03660 1.03440 1.22334 0.94358 0.92591 0.81614 1.21891 1.02497 0.90928 1.04177 1.22469 1.01681 1.02237 0.97272 1.86307 1.71554 1.23424 1.47221 1.18415 0.78835 0.80772 0.82657 1.90910 1.42342 1.71031 1.44464 1.44744 1.55208 1.12984 1.22903 1.21437 0.99733 0.78087 0.98237 1.22848 1.00989 0.96811 0.92098 0.86166 1.23538 1.00862 0.97056 0.97113 1.21858 0.87790 0.97937 0.91736 0.89610 1.45415 1.10576 1.71585 1.06764 1.18349 0.88315 0.75655 0.82605 1.90812 1.30769 1.51081 1.72860 1.19952 0.93627 1.07538 0.94210 1.20893 0.98311 0.93415 0.92169 1.20260 0.92265 1.05767 0.97621 1.25074 0.94957 1.05552 0.92489 1.86479 1.32704 1.45282 1.71475 0.94362 0.75861 0.83721 0.79483 1.18031 0.81369 1.01564 0.90550 1.91554 1.50414 1.93334 1.75700 1.21403 1.01889 1.02220 0.90876 1.21495 0.89251 0.93764 1.01607 1.23268 1.04658 0.95171 0.92913 0.92059 0.89524 0.91793 0.91085 0.88391 0.91283 0.91753 0.89567 0.91824 0.74680 0.91102 0.91829 0.89144 0.91163 0.74425 0.84009 0.86896 0.75282 1.18049 1.23315 0.81152 0.80715 0.88496 0.87695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.55 8.37 71.98 0.60 0.06 16 2 C 0.13 0.30 1.13 -10.79 -0.01 0.29 16 3 C -0.14 0.35 8.85 71.98 0.64 0.99 16 4 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 5 O -0.37 -1.68 9.94 -55.47 -0.55 -2.24 16 6 C 0.64 3.44 8.06 129.79 1.05 4.49 16 7 O -0.60 -6.61 11.88 19.81 0.24 -6.37 16 8 N -0.70 1.47 5.56 -590.84 -3.29 -1.82 16 9 C 0.15 -0.70 5.51 86.38 0.48 -0.22 16 10 C -0.11 1.11 3.63 -10.27 -0.04 1.08 16 11 H 0.12 -1.69 8.14 -2.39 -0.02 -1.71 16 12 C -0.15 0.93 7.43 31.12 0.23 1.16 16 13 C 0.11 -0.60 4.32 45.52 0.20 -0.41 16 14 H 0.09 0.01 7.46 -2.39 -0.02 -0.01 16 15 N -0.69 4.54 5.21 -443.01 -2.31 2.23 16 16 C 0.56 0.51 7.77 86.75 0.67 1.18 16 17 O -0.58 -6.00 15.94 -3.94 -0.06 -6.06 16 18 C -0.15 0.33 5.87 -20.09 -0.12 0.21 16 19 C -0.03 -0.02 8.77 22.51 0.20 0.18 16 20 C -0.16 0.04 5.13 -19.86 -0.10 -0.06 16 21 C -0.07 -0.05 2.97 71.24 0.21 0.16 16 22 O -0.55 -0.81 11.64 -148.98 -1.73 -2.55 16 23 Si 0.76 -0.24 30.81 68.60 2.11 1.88 16 24 C 0.10 -0.14 6.67 22.47 0.15 0.01 16 25 F -0.13 -0.28 12.82 44.97 0.58 0.30 16 26 C -0.15 0.98 10.01 22.27 0.22 1.20 16 27 C -0.04 0.37 9.54 22.51 0.21 0.58 16 28 C -0.12 1.24 7.39 31.12 0.23 1.47 16 29 H 0.06 0.15 8.14 -2.39 -0.02 0.14 16 30 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 31 H 0.06 0.53 5.88 -2.38 -0.01 0.52 16 32 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 33 H 0.10 -0.56 8.14 -2.38 -0.02 -0.58 16 34 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.06 0.50 5.88 -2.39 -0.01 0.48 16 36 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 37 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 38 H 0.42 -2.77 8.58 -92.71 -0.80 -3.57 16 39 H 0.07 -0.25 8.14 -2.38 -0.02 -0.27 16 40 H 0.06 -0.13 7.85 -2.39 -0.02 -0.15 16 41 H 0.09 -0.43 7.90 -2.39 -0.02 -0.45 16 42 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 43 H 0.42 -5.72 6.73 -92.70 -0.62 -6.34 16 44 H 0.14 0.44 6.65 -2.91 -0.02 0.43 16 45 H 0.11 0.24 7.96 -2.39 -0.02 0.22 16 46 H 0.40 -2.55 8.42 -74.06 -0.62 -3.17 16 47 H -0.25 -0.99 5.27 99.48 0.52 -0.46 16 48 H -0.30 -2.23 7.11 99.48 0.71 -1.53 16 49 H 0.17 -1.96 8.06 -2.91 -0.02 -1.99 16 50 H 0.18 -2.95 6.40 -2.91 -0.02 -2.97 16 51 H 0.10 -1.24 8.14 -2.39 -0.02 -1.26 16 52 H 0.10 -1.04 8.10 -2.39 -0.02 -1.06 16 Total: 0.00 -25.87 421.42 -0.80 -26.67 By element: Atomic # 1 Polarization: -23.36 SS G_CDS: -1.21 Total: -24.57 kcal Atomic # 6 Polarization: 7.11 SS G_CDS: 5.42 Total: 12.53 kcal Atomic # 7 Polarization: 6.00 SS G_CDS: -5.59 Total: 0.41 kcal Atomic # 8 Polarization: -15.10 SS G_CDS: -2.11 Total: -17.22 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.58 Total: 0.30 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: 2.11 Total: 1.88 kcal Total: -25.87 -0.80 -26.67 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_12496548.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.468 kcal (2) G-P(sol) polarization free energy of solvation -25.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.802 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.668 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds