Wall clock time and date at job start Sat Mar 6 2021 19:59:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53001 * 109.47204 * 2 1 4 4 C 1.53003 * 109.47445 * 240.00295 * 2 1 3 5 5 O 1.45204 * 109.47287 * 120.00115 * 2 1 3 6 6 C 1.34628 * 117.00008 * 60.00082 * 5 2 1 7 7 O 1.21517 * 120.00166 * 0.02562 * 6 5 2 8 8 N 1.34772 * 120.00211 * 180.02562 * 6 5 2 9 9 C 1.46506 * 120.00508 * 180.02562 * 8 6 5 10 10 C 1.52990 * 109.47424 * 180.02562 * 9 8 6 11 11 H 1.08998 * 112.84978 * 316.19412 * 10 9 8 12 12 C 1.54058 * 113.69810 * 87.46712 * 10 9 8 13 13 C 1.53785 * 86.98440 * 139.98906 * 12 10 9 14 14 H 1.09001 * 113.60848 * 219.98175 * 13 12 10 15 15 N 1.46502 * 113.61144 * 89.16297 * 13 12 10 16 16 C 1.34781 * 119.99585 * 105.86306 * 15 13 12 17 17 O 1.21507 * 120.00127 * 359.97438 * 16 15 13 18 18 C 1.48175 * 119.99485 * 179.97438 * 16 15 13 19 19 N 1.32716 * 119.72383 * 359.97438 * 18 16 15 20 20 C 1.31519 * 121.64074 * 179.97438 * 19 18 16 21 21 C 1.38553 * 120.90388 * 0.02562 * 20 19 18 22 22 C 1.50706 * 120.32466 * 179.97438 * 21 20 19 23 23 O 1.42898 * 109.47270 * 245.02309 * 22 21 20 24 24 Si 1.86299 * 109.46786 * 5.02213 * 22 21 20 25 25 C 1.38628 * 119.35502 * 359.97438 * 21 20 19 26 26 C 1.38586 * 118.48302 * 0.28010 * 25 21 20 27 27 C 1.53783 * 113.61446 * 185.00188 * 10 9 8 28 28 H 1.09004 * 109.47575 * 299.99711 * 1 2 3 29 29 H 1.09004 * 109.47139 * 59.99893 * 1 2 3 30 30 H 1.09006 * 109.46844 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47609 * 179.97438 * 3 2 1 32 32 H 1.08995 * 109.47232 * 300.00368 * 3 2 1 33 33 H 1.09004 * 109.46619 * 59.99704 * 3 2 1 34 34 H 1.08997 * 109.46970 * 300.00023 * 4 2 1 35 35 H 1.08995 * 109.46846 * 59.99720 * 4 2 1 36 36 H 1.08998 * 109.47052 * 179.97438 * 4 2 1 37 37 H 0.97002 * 120.00021 * 0.02562 * 8 6 5 38 38 H 1.09002 * 109.46982 * 59.99536 * 9 8 6 39 39 H 1.09008 * 109.46536 * 300.00176 * 9 8 6 40 40 H 1.09001 * 113.60744 * 25.48254 * 12 10 9 41 41 H 1.09001 * 113.69447 * 254.50628 * 12 10 9 42 42 H 0.96993 * 119.99734 * 285.85308 * 15 13 12 43 43 H 1.08004 * 119.54899 * 180.02562 * 20 19 18 44 44 H 1.08999 * 109.47132 * 125.01892 * 22 21 20 45 45 H 0.96699 * 113.99735 * 60.00399 * 23 22 21 46 46 H 1.48499 * 109.99955 * 58.68125 * 24 22 21 47 47 H 1.48504 * 109.99894 * 179.97438 * 24 22 21 48 48 H 1.08002 * 120.75504 * 179.97438 * 25 21 20 49 49 H 1.08001 * 120.46602 * 179.70217 * 26 25 21 50 50 H 1.08993 * 113.62042 * 105.38576 * 27 10 9 51 51 H 1.09006 * 113.61288 * 334.47556 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5035 8 7 2.0673 -2.6654 2.4171 9 6 1.6741 -4.0669 2.5831 10 6 2.2731 -4.6145 3.8800 11 1 3.3136 -4.3226 4.0220 12 6 1.3902 -4.3744 5.1195 13 6 1.7824 -5.7907 5.5726 14 1 0.9592 -6.3508 6.0161 15 7 3.0007 -5.8305 6.3853 16 6 2.9176 -6.0388 7.7143 17 8 1.8322 -6.1931 8.2384 18 6 4.1498 -6.0796 8.5362 19 7 5.3324 -5.9109 7.9580 20 6 6.4497 -5.9394 8.6512 21 6 6.4323 -6.1489 10.0207 22 6 7.7206 -6.1797 10.8021 23 8 7.9174 -7.4869 11.3448 24 14 9.1413 -5.7552 9.6742 25 6 5.2184 -6.3298 10.6651 26 6 4.0576 -6.3001 9.9086 27 6 2.0208 -6.1170 4.0888 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9564 -0.8899 33 1 1.6765 1.9563 0.8900 34 1 1.6767 -1.7488 -1.2493 35 1 1.6767 -0.2073 -2.1392 36 1 3.1300 -0.7207 -1.2494 37 1 2.6262 -2.2363 3.0837 38 1 2.0414 -4.6498 1.7383 39 1 0.5872 -4.1365 2.6274 40 1 0.3307 -4.2681 4.8867 41 1 1.7615 -3.5874 5.7759 42 1 3.8670 -5.7070 5.9669 43 1 7.3937 -5.7977 8.1460 44 1 7.6711 -5.4532 11.6132 45 1 7.9712 -8.1854 10.6783 46 1 8.9328 -4.4110 9.0785 47 1 10.4176 -5.7816 10.4329 48 1 5.1786 -6.4951 11.7317 49 1 3.0949 -6.4422 10.3771 50 1 2.9007 -6.7360 3.9139 51 1 1.1332 -6.4863 3.5750 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437852_13287726.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:40 Heat of formation + Delta-G solvation = -83.562373 kcal Electronic energy + Delta-G solvation = -31978.973996 eV Core-core repulsion = 27460.102825 eV Total energy + Delta-G solvation = -4518.871171 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.01596 -41.67176 -40.99231 -39.50017 -38.19229 -37.97602 -35.82638 -34.94301 -34.37749 -33.50721 -32.99560 -29.27091 -28.30556 -28.26305 -27.78881 -26.88142 -25.14637 -24.64007 -23.68525 -22.81097 -22.12423 -21.13584 -20.30046 -19.36613 -19.02178 -18.69739 -17.78907 -17.60631 -17.20253 -16.98712 -16.78027 -16.49060 -16.32287 -16.29872 -15.99813 -15.77784 -15.63754 -15.32483 -15.01304 -14.93473 -14.53140 -14.44962 -14.35704 -14.33546 -13.95189 -13.65457 -13.59937 -13.39665 -13.24788 -12.96541 -12.82263 -12.79977 -12.69526 -12.34274 -12.24554 -12.22488 -12.16296 -11.77820 -11.44806 -11.38293 -11.25869 -11.13425 -10.92965 -10.74529 -10.69522 -10.38898 -10.17644 -10.07828 -5.22442 -0.63862 -0.01055 1.05227 1.24043 1.44837 1.56852 1.81359 1.89386 1.94638 2.62913 2.86308 3.10372 3.20927 3.28972 3.37280 3.47732 3.53959 3.61213 3.65665 3.70988 3.80496 3.85630 3.85866 3.99773 4.06483 4.07829 4.24706 4.40108 4.46591 4.50194 4.58207 4.60369 4.62070 4.65131 4.66384 4.75017 4.80259 4.81684 4.87125 4.90143 4.90960 4.93217 4.95616 5.03181 5.10291 5.25022 5.28695 5.38976 5.46579 5.49363 5.63861 6.25194 6.33546 6.45284 6.55688 7.07478 7.46840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.649 3.351 7 O -0.567 6.567 8 N -0.711 5.711 9 C 0.147 3.853 10 C -0.127 4.127 11 H 0.100 0.900 12 C -0.146 4.146 13 C 0.117 3.883 14 H 0.108 0.892 15 N -0.694 5.694 16 C 0.576 3.424 17 O -0.526 6.526 18 C 0.080 3.920 19 N -0.453 5.453 20 C 0.104 3.896 21 C -0.150 4.150 22 C -0.067 4.067 23 O -0.536 6.536 24 Si 0.686 3.314 25 C -0.053 4.053 26 C -0.107 4.107 27 C -0.132 4.132 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.406 0.594 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.097 0.903 41 H 0.074 0.926 42 H 0.412 0.588 43 H 0.165 0.835 44 H 0.120 0.880 45 H 0.381 0.619 46 H -0.252 1.252 47 H -0.249 1.249 48 H 0.148 0.852 49 H 0.153 0.847 50 H 0.081 0.919 51 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.041 -0.603 -0.713 4.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.281 6.281 6 C 0.402 3.598 7 O -0.456 6.456 8 N -0.371 5.371 9 C 0.025 3.975 10 C -0.146 4.146 11 H 0.118 0.882 12 C -0.185 4.185 13 C 0.012 3.988 14 H 0.126 0.874 15 N -0.345 5.345 16 C 0.361 3.639 17 O -0.401 6.401 18 C -0.058 4.058 19 N -0.164 5.164 20 C -0.055 4.055 21 C -0.152 4.152 22 C -0.178 4.178 23 O -0.341 6.341 24 Si 0.587 3.413 25 C -0.078 4.078 26 C -0.128 4.128 27 C -0.171 4.171 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.090 0.910 36 H 0.079 0.921 37 H 0.241 0.759 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.115 0.885 41 H 0.093 0.907 42 H 0.249 0.751 43 H 0.181 0.819 44 H 0.138 0.862 45 H 0.229 0.771 46 H -0.177 1.177 47 H -0.173 1.173 48 H 0.166 0.834 49 H 0.171 0.829 50 H 0.100 0.900 51 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 3.521 0.109 -1.344 3.770 hybrid contribution 0.233 0.420 1.379 1.460 sum 3.753 0.528 0.035 3.791 Atomic orbital electron populations 1.22522 0.93860 1.05049 1.02687 1.22109 0.94441 0.91544 0.81898 1.21878 1.02309 0.92400 1.03318 1.22520 1.01578 1.03463 0.96539 1.86302 1.71519 1.23521 1.46713 1.18115 0.78866 0.80622 0.82211 1.90922 1.40987 1.70488 1.43227 1.44721 1.55911 1.12726 1.23704 1.21377 1.00125 0.78733 0.97259 1.22964 1.00543 0.96970 0.94076 0.88205 1.23601 1.00717 0.97556 0.96603 1.21882 0.88182 0.97789 0.90957 0.87408 1.45487 1.10169 1.71922 1.06936 1.17839 0.87399 0.76562 0.82128 1.90825 1.27831 1.49232 1.72162 1.21139 0.91859 1.00467 0.92333 1.67499 0.97821 1.11020 1.40060 1.22590 0.96350 0.96205 0.90348 1.21665 0.97343 1.00574 0.95627 1.25054 0.99896 0.89306 1.03593 1.86545 1.95143 1.15417 1.36984 0.94837 0.77415 0.85606 0.83457 1.21573 0.90753 0.94198 1.01320 1.22232 1.00690 0.96404 0.93454 1.23290 1.03823 0.95194 0.94768 0.92137 0.90949 0.89424 0.91416 0.89940 0.91424 0.89419 0.90955 0.92141 0.75934 0.90801 0.90729 0.88486 0.90697 0.75111 0.81883 0.86227 0.77120 1.17706 1.17321 0.83445 0.82934 0.90005 0.87837 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.30 8.37 37.15 0.31 0.02 16 2 C 0.14 0.22 1.13 -90.62 -0.10 0.11 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.28 8.37 37.16 0.31 0.03 16 5 O -0.37 -0.98 9.94 -40.29 -0.40 -1.38 16 6 C 0.65 1.93 8.06 54.05 0.44 2.37 16 7 O -0.57 -3.03 11.88 -19.29 -0.23 -3.26 16 8 N -0.71 0.12 5.56 -65.28 -0.36 -0.25 16 9 C 0.15 -0.21 5.52 -4.04 -0.02 -0.23 16 10 C -0.13 0.41 3.64 -89.67 -0.33 0.09 16 11 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 12 C -0.15 0.30 7.45 -25.77 -0.19 0.11 16 13 C 0.12 -0.16 4.30 -67.11 -0.29 -0.45 16 14 H 0.11 0.01 7.50 -51.93 -0.39 -0.38 16 15 N -0.69 0.44 5.25 -53.85 -0.28 0.16 16 16 C 0.58 1.15 7.81 -12.18 -0.10 1.05 16 17 O -0.53 -2.66 15.94 5.36 0.09 -2.57 16 18 C 0.08 0.08 6.75 -83.01 -0.56 -0.48 16 19 N -0.45 0.02 9.54 -9.80 -0.09 -0.08 16 20 C 0.10 -0.17 9.84 -17.57 -0.17 -0.34 16 21 C -0.15 0.25 5.37 -104.36 -0.56 -0.31 16 22 C -0.07 0.16 2.82 36.01 0.10 0.26 16 23 O -0.54 0.92 12.84 -35.23 -0.45 0.47 16 24 Si 0.69 -2.09 29.83 -169.99 -5.07 -7.16 16 25 C -0.05 0.06 9.83 -39.31 -0.39 -0.33 16 26 C -0.11 -0.03 9.63 -39.06 -0.38 -0.40 16 27 C -0.13 0.44 7.38 -25.92 -0.19 0.25 16 28 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 30 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.09 0.32 5.88 -51.93 -0.31 0.01 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 37 H 0.41 -0.80 8.58 -40.82 -0.35 -1.15 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 -0.05 7.85 -51.92 -0.41 -0.46 16 40 H 0.10 -0.20 7.91 -51.93 -0.41 -0.61 16 41 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.41 -0.84 8.03 -40.82 -0.33 -1.17 16 43 H 0.16 -0.67 4.92 -52.48 -0.26 -0.93 16 44 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 45 H 0.38 -2.10 8.70 45.56 0.40 -1.71 16 46 H -0.25 0.19 7.11 56.52 0.40 0.59 16 47 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 48 H 0.15 -0.34 8.06 -52.49 -0.42 -0.77 16 49 H 0.15 0.00 7.64 -52.49 -0.40 -0.40 16 50 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 51 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 LS Contribution 416.70 15.07 6.28 6.28 Total: 0.00 -9.14 416.70 -10.18 -19.32 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -7.86 Total: -13.67 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: -1.79 Total: 2.14 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.74 Total: -0.17 kcal Atomic # 8 Polarization: -5.75 SS G_CDS: -1.00 Total: -6.75 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: -5.07 Total: -7.16 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -9.14 -10.18 -19.32 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13287726.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.242 kcal (2) G-P(sol) polarization free energy of solvation -9.144 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.562 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds