Wall clock time and date at job start Sat Mar 6 2021 19:59:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52998 * 109.46614 * 2 1 4 4 C 1.52994 * 109.47457 * 240.00014 * 2 1 3 5 5 O 1.45200 * 109.47215 * 119.99541 * 2 1 3 6 6 C 1.34638 * 116.99928 * 60.00123 * 5 2 1 7 7 O 1.21517 * 119.99694 * 0.02562 * 6 5 2 8 8 N 1.34772 * 120.00262 * 179.97438 * 6 5 2 9 9 C 1.46494 * 120.00463 * 180.02562 * 8 6 5 10 10 C 1.52999 * 109.47391 * 180.02562 * 9 8 6 11 11 H 1.08993 * 112.90825 * 316.25137 * 10 9 8 12 12 C 1.53962 * 113.66529 * 87.55384 * 10 9 8 13 13 C 1.53782 * 87.11063 * 139.88900 * 12 10 9 14 14 H 1.09001 * 113.61250 * 220.08565 * 13 12 10 15 15 N 1.46496 * 113.68971 * 89.19569 * 13 12 10 16 16 C 1.34784 * 119.99758 * 107.45966 * 15 13 12 17 17 O 1.21552 * 120.00153 * 0.02562 * 16 15 13 18 18 C 1.47839 * 119.99861 * 179.97438 * 16 15 13 19 19 C 1.39517 * 120.55939 * 359.73235 * 18 16 15 20 20 N 1.31701 * 120.56616 * 179.76982 * 19 18 16 21 21 C 1.31923 * 121.87641 * 0.48950 * 20 19 18 22 22 C 1.38353 * 121.08250 * 359.77367 * 21 20 19 23 23 C 1.50701 * 120.34773 * 179.97438 * 22 21 20 24 24 O 1.42895 * 109.46973 * 244.97359 * 23 22 21 25 25 Si 1.86296 * 109.47303 * 4.97715 * 23 22 21 26 26 C 1.38354 * 119.30459 * 359.97277 * 22 21 20 27 27 C 1.53781 * 87.08260 * 334.63747 * 13 12 10 28 28 H 1.09003 * 109.47495 * 299.99886 * 1 2 3 29 29 H 1.09002 * 109.47212 * 60.00604 * 1 2 3 30 30 H 1.09003 * 109.46953 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47021 * 179.97438 * 3 2 1 32 32 H 1.08998 * 109.47325 * 299.99647 * 3 2 1 33 33 H 1.08999 * 109.47521 * 59.99665 * 3 2 1 34 34 H 1.09003 * 109.47105 * 299.99988 * 4 2 1 35 35 H 1.09002 * 109.47414 * 59.99505 * 4 2 1 36 36 H 1.09003 * 109.47214 * 179.97438 * 4 2 1 37 37 H 0.97000 * 119.99857 * 0.02562 * 8 6 5 38 38 H 1.09002 * 109.47287 * 60.00002 * 9 8 6 39 39 H 1.09004 * 109.47020 * 300.00283 * 9 8 6 40 40 H 1.08997 * 113.53543 * 25.33574 * 12 10 9 41 41 H 1.08998 * 113.73879 * 254.47172 * 12 10 9 42 42 H 0.97001 * 120.00688 * 287.46664 * 15 13 12 43 43 H 1.08001 * 119.72195 * 0.02562 * 19 18 16 44 44 H 1.08001 * 119.45866 * 179.74977 * 21 20 19 45 45 H 1.09002 * 109.47070 * 124.97483 * 23 22 21 46 46 H 0.96705 * 114.00051 * 60.00572 * 24 23 22 47 47 H 1.48502 * 109.99931 * 58.68052 * 25 23 22 48 48 H 1.48500 * 110.00128 * 179.97438 * 25 23 22 49 49 H 1.07991 * 120.86064 * 180.02562 * 26 22 21 50 50 H 1.09002 * 113.61445 * 139.98212 * 27 13 12 51 51 H 1.09002 * 113.61408 * 270.79943 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0141 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3385 7 8 0.9517 -2.5096 0.5036 8 7 2.0681 -2.6656 2.4168 9 6 1.6750 -4.0670 2.5828 10 6 2.2750 -4.6148 3.8793 11 1 3.3154 -4.3229 4.0218 12 6 1.3922 -4.3765 5.1179 13 6 1.7818 -5.7932 5.5719 14 1 0.9567 -6.3527 6.0128 15 7 2.9983 -5.8364 6.3870 16 6 2.9144 -6.0774 7.7104 17 8 1.8296 -6.2593 8.2276 18 6 4.1421 -6.1215 8.5329 19 6 5.3939 -5.9209 7.9503 20 7 6.4873 -5.9557 8.6837 21 6 6.4484 -6.1882 9.9817 22 6 5.2469 -6.4023 10.6333 23 6 5.2218 -6.6669 12.1167 24 8 4.7445 -7.9923 12.3561 25 14 6.9430 -6.4924 12.8079 26 6 4.0686 -6.3710 9.9089 27 6 2.0227 -6.1174 4.0881 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5137 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6765 1.9564 0.8899 34 1 1.6768 -1.7489 -1.2492 35 1 1.6767 -0.2075 -2.1392 36 1 3.1301 -0.7208 -1.2494 37 1 2.6277 -2.2367 3.0829 38 1 2.0415 -4.6498 1.7377 39 1 0.5881 -4.1365 2.6281 40 1 0.3332 -4.2688 4.8834 41 1 1.7621 -3.5900 5.7756 42 1 3.8641 -5.6914 5.9743 43 1 5.4666 -5.7313 6.8896 44 1 7.3697 -6.2120 10.5448 45 1 4.5607 -5.9493 12.6027 46 1 5.2857 -8.6844 11.9520 47 1 7.4631 -5.1280 12.5373 48 1 6.9317 -6.7504 14.2702 49 1 3.1167 -6.5343 10.3920 50 1 2.9028 -6.7363 3.9137 51 1 1.1363 -6.4872 3.5724 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437852_13287814.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:56 Heat of formation + Delta-G solvation = -82.513712 kcal Electronic energy + Delta-G solvation = -31996.709049 eV Core-core repulsion = 27477.883352 eV Total energy + Delta-G solvation = -4518.825697 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.08904 -41.70119 -41.04979 -39.54389 -38.20778 -38.01945 -35.88107 -34.99626 -34.38548 -33.82999 -32.87465 -29.19434 -28.32361 -28.28244 -27.38430 -26.95073 -26.07967 -24.18099 -23.90183 -22.86614 -21.96127 -21.20126 -20.41465 -19.36082 -19.06226 -18.22711 -17.98730 -17.75619 -17.60986 -17.23660 -16.97962 -16.56929 -16.34367 -16.16149 -16.04379 -15.76164 -15.64735 -15.33606 -15.02069 -14.90757 -14.62291 -14.44765 -14.40345 -14.27951 -14.01707 -13.67976 -13.60978 -13.41510 -13.30739 -13.00788 -12.84499 -12.81984 -12.80425 -12.37004 -12.27597 -12.23470 -12.19217 -11.84263 -11.50220 -11.41843 -11.28331 -11.11005 -10.95826 -10.68023 -10.63567 -10.43246 -10.25514 -10.16580 -5.19642 -0.65484 -0.09268 1.08169 1.20527 1.48209 1.63030 1.78534 1.86703 1.91373 2.55372 2.93594 3.05455 3.21620 3.24989 3.31488 3.41107 3.50445 3.53225 3.58629 3.64727 3.67457 3.78457 3.83654 3.97763 3.99806 4.02303 4.10762 4.33426 4.37085 4.44002 4.54434 4.55271 4.57095 4.62671 4.63348 4.71499 4.76196 4.78494 4.81969 4.83333 4.85697 4.89291 4.93646 4.94618 5.08270 5.20061 5.22724 5.36949 5.38140 5.46053 5.60996 6.22089 6.38865 6.41335 6.54877 6.97536 7.43475 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.649 3.351 7 O -0.567 6.567 8 N -0.711 5.711 9 C 0.147 3.853 10 C -0.127 4.127 11 H 0.099 0.901 12 C -0.146 4.146 13 C 0.119 3.881 14 H 0.110 0.890 15 N -0.708 5.708 16 C 0.568 3.432 17 O -0.524 6.524 18 C -0.189 4.189 19 C 0.140 3.860 20 N -0.477 5.477 21 C 0.130 3.870 22 C -0.179 4.179 23 C -0.065 4.065 24 O -0.535 6.535 25 Si 0.687 3.313 26 C 0.012 3.988 27 C -0.133 4.133 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.406 0.594 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.097 0.903 41 H 0.075 0.925 42 H 0.401 0.599 43 H 0.161 0.839 44 H 0.164 0.836 45 H 0.120 0.880 46 H 0.381 0.619 47 H -0.253 1.253 48 H -0.248 1.248 49 H 0.152 0.848 50 H 0.081 0.919 51 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.622 -0.370 -1.135 4.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.456 6.456 8 N -0.371 5.371 9 C 0.025 3.975 10 C -0.146 4.146 11 H 0.117 0.883 12 C -0.185 4.185 13 C 0.014 3.986 14 H 0.128 0.872 15 N -0.360 5.360 16 C 0.355 3.645 17 O -0.400 6.400 18 C -0.194 4.194 19 C -0.019 4.019 20 N -0.185 5.185 21 C -0.026 4.026 22 C -0.181 4.181 23 C -0.176 4.176 24 O -0.341 6.341 25 Si 0.587 3.413 26 C -0.014 4.014 27 C -0.172 4.172 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.240 0.760 38 H 0.092 0.908 39 H 0.093 0.907 40 H 0.115 0.885 41 H 0.093 0.907 42 H 0.236 0.764 43 H 0.178 0.822 44 H 0.180 0.820 45 H 0.137 0.863 46 H 0.228 0.772 47 H -0.177 1.177 48 H -0.172 1.172 49 H 0.170 0.830 50 H 0.099 0.901 51 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 4.334 0.190 -0.751 4.403 hybrid contribution -0.688 0.530 0.192 0.889 sum 3.647 0.720 -0.559 3.759 Atomic orbital electron populations 1.22523 0.93851 1.05042 1.02705 1.22112 0.94445 0.91552 0.81876 1.21878 1.02316 0.92379 1.03334 1.22520 1.01581 1.03452 0.96548 1.86303 1.71508 1.23497 1.46730 1.18118 0.78862 0.80639 0.82195 1.90925 1.40959 1.70490 1.43191 1.44706 1.55900 1.12698 1.23795 1.21369 1.00159 0.78775 0.97204 1.22949 1.00446 0.96991 0.94207 0.88296 1.23590 1.00845 0.97529 0.96546 1.21854 0.88135 0.97807 0.90804 0.87245 1.45550 1.09870 1.72921 1.07656 1.18000 0.88373 0.76327 0.81832 1.90831 1.28714 1.48503 1.71996 1.21014 0.94800 1.08036 0.95566 1.23021 0.86792 0.92078 0.99989 1.67723 1.31209 1.12819 1.06718 1.22885 0.96859 0.92153 0.90686 1.21444 0.94279 1.03954 0.98445 1.25034 1.12088 0.87823 0.92645 1.86554 1.56150 1.13911 1.77452 0.94881 0.77946 0.85977 0.82455 1.21644 0.99445 0.88534 0.91761 1.23309 1.03879 0.95139 0.94827 0.92132 0.90934 0.89437 0.91407 0.89927 0.91416 0.89432 0.90937 0.92134 0.75951 0.90784 0.90703 0.88450 0.90657 0.76352 0.82206 0.81975 0.86269 0.77193 1.17733 1.17235 0.82998 0.90061 0.87794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.24 8.37 37.15 0.31 0.07 16 5 O -0.37 -0.87 9.94 -40.32 -0.40 -1.27 16 6 C 0.65 1.69 8.06 54.05 0.44 2.13 16 7 O -0.57 -2.86 11.88 -19.29 -0.23 -3.09 16 8 N -0.71 0.49 5.56 -65.28 -0.36 0.13 16 9 C 0.15 -0.30 5.51 -4.05 -0.02 -0.32 16 10 C -0.13 0.53 3.65 -89.71 -0.33 0.20 16 11 H 0.10 -0.51 8.14 -51.93 -0.42 -0.94 16 12 C -0.15 0.42 7.44 -25.82 -0.19 0.23 16 13 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 14 H 0.11 -0.04 7.46 -51.93 -0.39 -0.43 16 15 N -0.71 1.66 5.22 -53.96 -0.28 1.38 16 16 C 0.57 0.50 7.78 -12.33 -0.10 0.40 16 17 O -0.52 -2.55 16.02 5.32 0.09 -2.46 16 18 C -0.19 0.02 5.89 -104.82 -0.62 -0.60 16 19 C 0.14 -0.20 10.71 -17.13 -0.18 -0.39 16 20 N -0.48 0.04 10.35 -12.91 -0.13 -0.10 16 21 C 0.13 -0.16 9.84 -17.47 -0.17 -0.33 16 22 C -0.18 0.17 5.35 -104.54 -0.56 -0.39 16 23 C -0.06 0.10 2.82 36.01 0.10 0.20 16 24 O -0.54 0.42 12.84 -35.23 -0.45 -0.03 16 25 Si 0.69 -1.73 29.83 -169.99 -5.07 -6.80 16 26 C 0.01 0.01 9.38 -38.87 -0.36 -0.36 16 27 C -0.13 0.56 7.38 -25.92 -0.19 0.37 16 28 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 35 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.41 -1.05 8.58 -40.82 -0.35 -1.40 16 38 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.07 -0.09 7.84 -51.93 -0.41 -0.49 16 40 H 0.10 -0.26 7.90 -51.93 -0.41 -0.67 16 41 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.40 -2.02 6.77 -40.82 -0.28 -2.30 16 43 H 0.16 -0.76 6.42 -52.49 -0.34 -1.10 16 44 H 0.16 -0.57 4.91 -52.49 -0.26 -0.83 16 45 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 46 H 0.38 -1.81 8.70 45.56 0.40 -1.41 16 47 H -0.25 0.07 7.11 56.52 0.40 0.47 16 48 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 49 H 0.15 0.18 7.74 -52.49 -0.41 -0.22 16 50 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 51 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 LS Contribution 414.42 15.07 6.25 6.25 Total: 0.00 -10.38 414.42 -9.96 -20.34 By element: Atomic # 1 Polarization: -7.83 SS G_CDS: -7.73 Total: -15.56 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -1.63 Total: 1.21 kcal Atomic # 7 Polarization: 2.19 SS G_CDS: -0.78 Total: 1.41 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -1.00 Total: -6.85 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.07 Total: -6.80 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -10.38 -9.96 -20.34 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13287814.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.178 kcal (2) G-P(sol) polarization free energy of solvation -10.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.554 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.960 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.336 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.514 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds